EY665775

Overview
NameEY665775
Unique NameEY665775
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_PSESM (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Pseudomonas syringae pv. tomato GN=ispG PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.638e-18
Identity = 51/108 (47.22%), Postives = 70/108 (64.81%), Query Frame = 3
Query:  315 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGN 635
            RR++R + VG+V +G + PI VQ+MT +DT DVA TV ++ R+   G D+VRI+V     A+A   IK  +      +PLVADIHF   +ALRVAE   D +R+NPGN
Sbjct:    9 RRESRKIWVGSVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRISVPDMDAAEAFGRIKQLV-----KVPLVADIHFDYRIALRVAELGVDCLRINPGN 111          
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_EXISA (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=ispG PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.638e-18
Identity = 52/119 (43.70%), Postives = 72/119 (60.50%), Query Frame = 3
Query:  294 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADR 647
            E +H+++   TR V VGN+ IG  + + +Q+MTT  T DV  TV E+ R+ + G  +VR+    +R ADA  EIK+ +     NIPLV DIHF   +AL+  E   DKIR+NPGN   R
Sbjct:    3 EILHRSL---TRPVRVGNLIIGGSNEVIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVACPDERAADALAEIKSRI-----NIPLVVDIHFDYKLALKAIESGVDKIRINPGNIGRR 113          
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_PSE14 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=ispG PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.057e-18
Identity = 50/108 (46.30%), Postives = 70/108 (64.81%), Query Frame = 3
Query:  315 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGN 635
            RR++R + VG+V +G + PI VQ+MT +DT DVA TV ++ R+   G D+VR++V     A+A   IK  +      +PLVADIHF   +ALRVAE   D +R+NPGN
Sbjct:    9 RRESRKIWVGSVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRVSVPDMDAAEAFGRIKQLV-----KVPLVADIHFDYRIALRVAELGVDCLRINPGN 111          
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_LYSSC (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Lysinibacillus sphaericus (strain C3-41) GN=ispG PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.057e-18
Identity = 50/108 (46.30%), Postives = 67/108 (62.04%), Query Frame = 3
Query:  315 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGN 635
            R  TR V VGN+ IG  + + +Q+M T  T DV  TV E++R+ + G  +VR+ V  +R ADA  EIK     K  +IPLVADIHF   +AL+  E   DK+R+NPGN
Sbjct:    7 RSNTRPVRVGNLTIGGSNELFIQSMCTTKTHDVEATVAEILRLEEAGCQIVRVAVPDERAADAIAEIK-----KRIHIPLVADIHFDYRLALKAIENGIDKVRINPGN 109          
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_CORU7 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) GN=ispG PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.057e-18
Identity = 46/111 (41.44%), Postives = 68/111 (61.26%), Query Frame = 3
Query:  315 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFAD 644
            RRKTR +MVG+V +GSEHPI VQ+MTT  T D+  T++++ ++   G D+VR+     R+A+A       ++ K   IP++ADIHF P    +  E     +RVNPGN  +
Sbjct:   19 RRKTRQLMVGDVGVGSEHPISVQSMTTTKTHDINATLQQIAQLTASGCDIVRVACPKPRDAEAL-----PIIAKKSPIPVIADIHFQPRYIFQAIEAGCAAVRVNPGNIKE 124          
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_CHRSD (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=ispG PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.057e-18
Identity = 50/108 (46.30%), Postives = 71/108 (65.74%), Query Frame = 3
Query:  315 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGN 635
            RRK+R + VG+V +G + PI VQ+MT  DT DV  TV ++ ++   GAD+VR++V     A+A  +IK     +  ++PLVADIHF   +ALRVAE   D +R+NPGN
Sbjct:    9 RRKSRQIHVGHVPVGGDAPIAVQSMTNTDTLDVDATVAQIRQLEAAGADIVRVSVPTMDAAEAFGQIK-----RQVSVPLVADIHFDYKIALRVAELGVDCLRINPGN 111          
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_AZOVD (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=ispG PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.057e-18
Identity = 51/108 (47.22%), Postives = 68/108 (62.96%), Query Frame = 3
Query:  315 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGN 635
            RR +R + VG VA+G + PI VQ+MT  DT DV  TV ++ R+   GAD+VR++V     A+A   IK  +      +PLVADIHF   +ALRVAE   D +R+NPGN
Sbjct:    9 RRPSRKIWVGPVAVGGDAPISVQSMTNTDTHDVEATVAQIRRLEAAGADIVRVSVPDMDAAEAFGRIKQQV-----QLPLVADIHFDYQIALRVAELGVDCLRINPGN 111          
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_SYMTH (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Symbiobacterium thermophilum GN=ispG PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.911e-18
Identity = 51/112 (45.54%), Postives = 68/112 (60.71%), Query Frame = 3
Query:  315 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADR 647
            RRKTR V VG V IG   PI VQ+MT  DT+DV   + ++  + + G D+VR+      EA  CF+     ++K  NIPLVAD+HF   +AL+V E   DK+R+NPGN   R
Sbjct:    4 RRKTRAVKVGRVQIGGGAPITVQSMTKCDTRDVPEVLRQIRALEEAGCDIVRVAAP-TMEAAECFK----EIRKGCNIPLVADVHFDYRIALKVLEAGIDKLRINPGNIGAR 110          
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_BACLD (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=ispG PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.911e-18
Identity = 53/114 (46.49%), Postives = 68/114 (59.65%), Query Frame = 3
Query:  309 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADR 647
            T R KTR V VG + IG  + + +Q+MTT  T DV  TV E+ R+A+ G  +VR+    +R ADA  EIK     K  +IPLV DIHF   +AL+  E   DKIR+NPGN   R
Sbjct:    5 THRTKTRPVKVGPLTIGGNNEVVIQSMTTTKTHDVEATVAEINRLAEAGCQIVRVACPDERAADAIPEIK-----KRISIPLVVDIHFNYKLALKAIEGGADKIRINPGNIGRR 113          
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_ALTMD (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=ispG PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.911e-18
Identity = 52/111 (46.85%), Postives = 70/111 (63.06%), Query Frame = 3
Query:  315 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFAD 644
            RRK+  + VGNV IG   PI VQ+MT   T DVA TV+++ RI   G ++VR++V     A+A  EIK     K  ++PLVADIHF   +AL+VAE   D +R+NPGN  +
Sbjct:    9 RRKSTRINVGNVPIGDGAPIAVQSMTNTRTTDVAATVDQINRIVAVGGEIVRVSVPTMEAAEAFKEIK-----KQVSVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGN 114          
The following BLAST results are available for this feature:
BLAST of EY665775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 424
Match NameE-valueIdentityDescription
ISPG_PSESM4.638e-1847.224-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_EXISA4.638e-1843.704-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_PSE146.057e-1846.304-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_LYSSC6.057e-1846.304-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_CORU76.057e-1841.444-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_CHRSD6.057e-1846.304-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_AZOVD6.057e-1847.224-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_SYMTH7.911e-1845.544-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_BACLD7.911e-1846.494-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_ALTMD7.911e-1846.854-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-D10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665775 ID=EY665775; Name=EY665775; organism=Citrus sinensis; type=EST; length=878bp
ATTTCTCTCTCAGAGTTAGTTCTCACTTCTCAGCATTATAAAAGGCGTAG
TATTTTGCAAAGATGGCGACTGGAACCCTGCCCGCTTCGTTTCCGGGCCT
CAAGAGCAGAGACCCGGGCTTGGGGTTTGCGAAAAGTGTGGATTTTGTGA
GAGTTTGTGATTTCAGAAAGTTCAAGTCTGGCAGAAGAAGATTCACTGTG
ATAAGGAATTCATCAAATTCCAGTTCGGATATCGCTGAGCTTCAGCCTGT
ATCAGAAGGAAGCCCACTGTTAGTTCCCAGACAAAAGTATTGTGAATCCA
TTCACAAAACTGTCAGAAGGAAGACTCGGACGGTGATGGTGGGAAATGTA
GCCATTGGCAGTGAGCATCCTATTAGAGTTCAAACAATGACTACAAATGA
CACTAAGGATGTTGCTGGAACAGTGGAAGAGGTAATGAGAATAGCAGACC
AGGGAGCAGATCTTGTTCGGATCACAGTTCAAGGGAAGAGAGAGGCAGAT
GCATGTTTTGAGATAAAAAACTCACTTGTCCAGAAAAACTACAATATACC
TCTGGTGGCAGATATTCATTTTGCCCCTTCTGTTGCTCTACGAGTTGCTG
AATGCTTTGACAAAATCCGTGTCAACCCAGGAAATTTTGCTGATAGACGG
GCTCAGTTTGAGCAGCTAGAGGACCCAGACGATGAGTATCAGAAAGAACT
TCAGCATATTGAGGAGGGTTTTATTCCATTGGGTGAGAATTGTAAAAAGT
ACGGAAGGGCCTGGCGTATTGGGCTAACCCTGGGGAACCCTTTCGAATTG
TTACATGAGCTACTTTAGGGATCCCTCCCAAGGGGATGCGTTTAATCTGC
CTTTTCGCTTTTTGAAAGAATCTTCGCG
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