EY665775

Overview
NameEY665775
Unique NameEY665775
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_GLOVI (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Gloeobacter violaceus GN=ispG PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.155e-19
Identity = 67/186 (36.02%), Postives = 90/186 (48.39%), Query Frame = 3
Query:  312 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLEDPDDEYQKELQHIEEGFIPLGENCKKYGRAWRIGLTLGNPFELLHELL*GSLPRGCV*SAFSLFE 866
            +RR TR V VG + IG   P+ VQ+M   DT D  G V  +  +   G +LVR+TV     A A   I+ +L      +PLVAD+H     +AL VA   DK+R+NPG F  RRA+       D E  +    I E   PL +      +A RIG+  G+  E +   + G  P G V SA    E
Sbjct:   14 LRRVTRPVQVGALTIGGNAPVVVQSMINEDTLDTPGAVAAIRALHKAGCELVRVTVPSLAHARALERIRKTLEDTYRPVPLVADVHHDGGPIALEVARHVDKVRINPGLFVFRRARLGDYTAEDVE--RARAQIREELKPLVDVLGAQDKAMRIGVNHGSLSERM-LYIHGDTPEGMVQSAVEFVE 196          
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_THETN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Thermoanaerobacter tengcongensis GN=ispG PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.344e-19
Identity = 49/109 (44.95%), Postives = 72/109 (66.06%), Query Frame = 3
Query:  312 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGN 635
            +R+ TR + +GN  IG  +PI VQ+MT  DT DV  TVE++ R+ ++G D++R+ V  ++ A +  EIK     K+ NIPLVADIHF   +A++ +    DKIR+NPGN
Sbjct:    4 MRKLTREIKIGNKKIGGNNPILVQSMTNTDTHDVEKTVEQIKRLEEEGCDIIRVAVPDEKAAYSIKEIK-----KHINIPLVADIHFDYRLAIKSIENGADKIRINPGN 107          
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_RHOPB (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Rhodopseudomonas palustris (strain BisB18) GN=ispG PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.344e-19
Identity = 53/124 (42.74%), Postives = 71/124 (57.26%), Query Frame = 3
Query:  315 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVAL----RVAECFDKIRVNPGNFADRRAQFEQLED 674
            R KT  VMVG+VA+G   PI VQ+MT  DT DVAGTVE+V  +   G++LVRITV  +  A A   I+++L ++    PL+ D H+     L      AE  DK R+NPGN   +  +  Q  D
Sbjct:   18 RHKTTQVMVGDVAVGGGAPIVVQSMTNTDTADVAGTVEQVAALTRAGSELVRITVDREEAAAAVPHIRDALRKRGITTPLIGDFHYIGHKLLADYPACAEALDKYRINPGNVGFKNKRDSQFAD 141          
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_PSEPF (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Pseudomonas fluorescens (strain Pf0-1) GN=ispG PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.344e-19
Identity = 51/108 (47.22%), Postives = 71/108 (65.74%), Query Frame = 3
Query:  315 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGN 635
            RR++R + VGNV +G + PI VQ+MT +DT DVA TV ++ R+   G D+VR++V     A+A  +IK  +      +PLVADIHF   +ALRVAE   D +R+NPGN
Sbjct:    9 RRESRKIWVGNVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRVSVPDMDAAEAFGKIKQLV-----KVPLVADIHFDYKIALRVAELGVDCLRINPGN 111          
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_THETH (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Thermus thermophilus GN=ispG PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.220e-18
Identity = 51/125 (40.80%), Postives = 70/125 (56.00%), Query Frame = 3
Query:  312 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALR----VAECFDKIRVNPGNFADRRAQFEQLED 674
            +RR T TV VG V IG  HPI VQ+MT   T+DV  T  +V+ +   G+++VR+TV  +  A A  EIK  L+ +   +PLV D HF   + LR    +AE  DK R+NPG     R + E   +
Sbjct:    4 MRRPTPTVYVGRVPIGGAHPIAVQSMTNTPTRDVEATTAQVLELHRAGSEIVRLTVNDEEAAKAVPEIKRRLLAEGVEVPLVGDFHFNGHLLLRKYPKMAEALDKFRINPGTLGRGRHKDEHFAE 128          
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_THET2 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=ispG PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.220e-18
Identity = 51/125 (40.80%), Postives = 70/125 (56.00%), Query Frame = 3
Query:  312 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALR----VAECFDKIRVNPGNFADRRAQFEQLED 674
            +RR T TV VG V IG  HPI VQ+MT   T+DV  T  +V+ +   G+++VR+TV  +  A A  EIK  L+ +   +PLV D HF   + LR    +AE  DK R+NPG     R + E   +
Sbjct:    4 MRRPTPTVYVGRVPIGGAHPIAVQSMTNTPTRDVEATTAQVLELHRAGSEIVRLTVNDEEAAKAVPEIKRRLLAEGVEVPLVGDFHFNGHLLLRKYPKMAEALDKFRINPGTLGRGRHKDEHFAE 128          
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_RUTMC (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Ruthia magnifica subsp. Calyptogena magnifica GN=ispG PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.220e-18
Identity = 51/108 (47.22%), Postives = 72/108 (66.67%), Query Frame = 3
Query:  315 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGN 635
            RRK++ V VG+VAIG + PI VQ+MT  +T DV  TV ++  I + GADLVR++V     A+A       +++K  NIPL++DIHF   +AL+VAE   D +R+NPGN
Sbjct:    9 RRKSKQVFVGDVAIGGDAPISVQSMTNTETTDVKATVAQIQAIQNAGADLVRVSVPTIDAAEAF-----KIIKKQVNIPLISDIHFDYKIALKVAEYGADCLRINPGN 111          
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_ANOFW (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=ispG PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.220e-18
Identity = 55/119 (46.22%), Postives = 70/119 (58.82%), Query Frame = 3
Query:  294 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADR 647
            E IH   R KTR V VGN+ IG  + + +Q+MTT  T DV  TV ++ R+ + G  +VR+    +R ADA  EIK     K  NIPLV DIHF   +AL+  E   DKIR+NPGN   R
Sbjct:    3 EIIH---RSKTRPVRVGNITIGGNNEVVIQSMTTTKTHDVDATVAQIHRLEEAGCQIVRVACPDERAADAIAEIK-----KRINIPLVVDIHFDYRLALKAIENGADKIRINPGNIGKR 113          
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_THET8 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=ispG PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.594e-18
Identity = 51/125 (40.80%), Postives = 70/125 (56.00%), Query Frame = 3
Query:  312 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALR----VAECFDKIRVNPGNFADRRAQFEQLED 674
            +RR T TV VG V IG  HPI VQ+MT   T+DV  T  +V+ +   G+++VR+TV  +  A A  EIK  L+ +   +PLV D HF   + LR    +AE  DK R+NPG     R + E   +
Sbjct:    4 MRRPTPTVYVGRVPIGGAHPIAVQSMTNTPTRDVEATTAQVLELHRAGSEIVRLTVNDEEAAKAVPEIKRRLLAEGAEVPLVGDFHFNGHLLLRKYPKMAEALDKFRINPGTLGRGRHKDEHFAE 128          
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_NITSB (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Nitratiruptor sp. (strain SB155-2) GN=ispG PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.594e-18
Identity = 51/111 (45.95%), Postives = 70/111 (63.06%), Query Frame = 3
Query:  315 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 647
            R  T+ + VG+VA+G + PI VQ+MT + T DV  TVE++ R+   GAD+VR+ V  + +A A  EIK     K  ++PLVADIHF   +AL  AE  D IR+NPGN   +
Sbjct:    3 RYPTKKIFVGDVAVGGDAPISVQSMTFSKTADVEATVEQINRLHFAGADIVRVAVPEEEDAKALKEIK-----KRTSLPLVADIHFNYRLALIAAEVVDCIRINPGNIGSK 108          
The following BLAST results are available for this feature:
BLAST of EY665775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 424
Match NameE-valueIdentityDescription
ISPG_GLOVI7.155e-1936.024-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_THETN9.344e-1944.954-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_RHOPB9.344e-1942.744-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_PSEPF9.344e-1947.224-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_THETH1.220e-1840.804-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_THET21.220e-1840.804-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_RUTMC1.220e-1847.224-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_ANOFW1.220e-1846.224-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_THET81.594e-1840.804-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_NITSB1.594e-1845.954-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-D10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665775 ID=EY665775; Name=EY665775; organism=Citrus sinensis; type=EST; length=878bp
ATTTCTCTCTCAGAGTTAGTTCTCACTTCTCAGCATTATAAAAGGCGTAG
TATTTTGCAAAGATGGCGACTGGAACCCTGCCCGCTTCGTTTCCGGGCCT
CAAGAGCAGAGACCCGGGCTTGGGGTTTGCGAAAAGTGTGGATTTTGTGA
GAGTTTGTGATTTCAGAAAGTTCAAGTCTGGCAGAAGAAGATTCACTGTG
ATAAGGAATTCATCAAATTCCAGTTCGGATATCGCTGAGCTTCAGCCTGT
ATCAGAAGGAAGCCCACTGTTAGTTCCCAGACAAAAGTATTGTGAATCCA
TTCACAAAACTGTCAGAAGGAAGACTCGGACGGTGATGGTGGGAAATGTA
GCCATTGGCAGTGAGCATCCTATTAGAGTTCAAACAATGACTACAAATGA
CACTAAGGATGTTGCTGGAACAGTGGAAGAGGTAATGAGAATAGCAGACC
AGGGAGCAGATCTTGTTCGGATCACAGTTCAAGGGAAGAGAGAGGCAGAT
GCATGTTTTGAGATAAAAAACTCACTTGTCCAGAAAAACTACAATATACC
TCTGGTGGCAGATATTCATTTTGCCCCTTCTGTTGCTCTACGAGTTGCTG
AATGCTTTGACAAAATCCGTGTCAACCCAGGAAATTTTGCTGATAGACGG
GCTCAGTTTGAGCAGCTAGAGGACCCAGACGATGAGTATCAGAAAGAACT
TCAGCATATTGAGGAGGGTTTTATTCCATTGGGTGAGAATTGTAAAAAGT
ACGGAAGGGCCTGGCGTATTGGGCTAACCCTGGGGAACCCTTTCGAATTG
TTACATGAGCTACTTTAGGGATCCCTCCCAAGGGGATGCGTTTAATCTGC
CTTTTCGCTTTTTGAAAGAATCTTCGCG
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