EY665775

Overview
NameEY665775
Unique NameEY665775
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_SULDN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=ispG PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.082e-18
Identity = 51/111 (45.95%), Postives = 68/111 (61.26%), Query Frame = 3
Query:  315 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 647
            R KT+ + VGNVA+G + PI VQ+MT + T DV  TVE++ R+   G D+VR+ V    +A A   IK  +     ++PLVADIHF   +AL  AE  D IR+NPGN   R
Sbjct:    4 RVKTKQIFVGNVAVGGDSPISVQSMTFSKTSDVFSTVEQIKRLHFAGCDIVRVAVPEMEDALALRAIKEQI-----SLPLVADIHFNYRLALIAAEVVDCIRINPGNIGSR 109          
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_AZOSE (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Azoarcus sp. (strain EbN1) GN=ispG PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.082e-18
Identity = 55/128 (42.97%), Postives = 73/128 (57.03%), Query Frame = 3
Query:  312 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVAL----RVAECFDKIRVNPGNF---ADRRAQFEQLED 674
            VR KTR V VG ++IGS  P+ VQ+MT  DT DV GT  +V  +A  G++LVRITV  +  A A   I++ L+  N ++PLV D H+     L      AE   K+R+NPGN    A R  QF  + D
Sbjct:   11 VRHKTRQVRVGRISIGSNAPVVVQSMTNTDTVDVLGTAMQVAELARAGSELVRITVNNEAAAKAVPHIRDRLLALNVDVPLVGDFHYNGHKLLSEHPACAEALAKLRINPGNVGAGAKRDPQFAAIVD 138          
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_PSEF5 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=ispG PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.719e-18
Identity = 50/108 (46.30%), Postives = 70/108 (64.81%), Query Frame = 3
Query:  315 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGN 635
            RR++R + VG+V +G + PI VQ+MT +DT DVA TV ++ R+   G D+VR++V     A+A   IK  +      +PLVADIHF   +ALRVAE   D +R+NPGN
Sbjct:    9 RRESRKIWVGSVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRVSVPDMDAAEAFGRIKQQV-----KVPLVADIHFDYKIALRVAELGVDCLRINPGN 111          
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_METCA (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Methylococcus capsulatus GN=ispG PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.719e-18
Identity = 57/137 (41.61%), Postives = 78/137 (56.93%), Query Frame = 3
Query:  315 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVAL----RVAECFDKIRVNPGNF---ADRRAQFEQLEDPDDEYQKELQ 704
            R++T  V VG+V IG   PI VQ+MT  DT DVAGTV +V+ +A  G++LVRITV  +  A+A   I+  L ++  N+PLV D HF     L      AE   K R+NPGN    + R  QF Q+ +    Y K ++
Sbjct:    4 RKQTVGVRVGSVRIGGGAPIVVQSMTNTDTADVAGTVRQVIDLARAGSELVRITVNNEEAAEAVPRIREELDRQGCNVPLVGDFHFNGHKLLDKYPACAEALGKFRINPGNVGRGSKRDPQFAQMIEFACRYDKPVR 140          
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_GEOSW (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Geobacillus sp. (strain WCH70) GN=ispG PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.719e-18
Identity = 55/119 (46.22%), Postives = 71/119 (59.66%), Query Frame = 3
Query:  294 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADR 647
            E IH   R KTR V VGN+ IG  + + +Q+MTT  T DV  TV ++ R+ + G  +VR+    +R A+A  EIK     K  NIPLVADIHF   +AL+  E   DKIR+NPGN   R
Sbjct:    3 EIIH---RSKTRPVRVGNLTIGGNNEVIIQSMTTTKTHDVEATVAQIKRLEEAGCQIVRVACPDERAANAIPEIK-----KRINIPLVADIHFDYKLALKAIEGGADKIRINPGNIGRR 113          
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_WOLSU (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Wolinella succinogenes GN=ispG PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.551e-18
Identity = 63/179 (35.20%), Postives = 90/179 (50.28%), Query Frame = 3
Query:  315 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEDPDDEYQKELQHIEEGFIPLGENCKKYGRAWRIGLTLGNPFELLHELL*GSLPRGCV*SA 851
            R KT+ + VG+VAIG + PI VQ+MT + T D+  T  ++ R+A  G D+VR+ V    +A+A  E+K     +   +PLVADIHF   +AL  A+  D IR+NPGN   +                      E    + + C + G   RIG+  G   E + E   G+ PRG V SA
Sbjct:    4 RVKTKKIFVGDVAIGGDAPISVQSMTFSKTADIGATKAQIDRLALAGCDIVRVAVSDHEDANALKELK-----RLSPLPLVADIHFRYKLALIAAQSVDCIRINPGNIGSK----------------------EKIKAVADACAERGIPIRIGVN-GGSLEEMFEQKYGATPRGMVESA 154          
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_SULNB (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Sulfurovum sp. (strain NBC37-1) GN=ispG PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.551e-18
Identity = 49/111 (44.14%), Postives = 71/111 (63.96%), Query Frame = 3
Query:  315 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 647
            R  T+ + VG+VA+G + PI VQ+MT +DT+DVA TVE++ R+   GAD+VR+ V    +A A   IK  +     ++PL+ADIHF   +AL  A+  D IR NPGN  ++
Sbjct:    4 RYPTKKIYVGDVAVGGDAPISVQSMTYSDTRDVAATVEQINRLHFAGADMVRVAVPEMEDALALKAIKEQI-----SLPLIADIHFNYRLALEAAKWVDCIRFNPGNIGEK 109          
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_NITHX (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=ispG PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.551e-18
Identity = 63/174 (36.21%), Postives = 88/174 (50.57%), Query Frame = 3
Query:  315 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVAL----RVAECFDKIRVNPGN--FADRRAQFEQLEDPDDEYQKELQHIEEGFIPLGENCKKYGRAWRIGLTLGN-PFELLHELL 815
            R KT  VMVG++A+G   PI VQ+MT  DT DV GT+ +V  ++  G+++VRITV     A A   I++ L ++    PL+ D H+     L      AE  DK R+NPGN  F D+R                    ++ F  + E   KYG+A RIG   G+   ELL  L+
Sbjct:   18 RHKTTQVMVGSIAVGGGAPIVVQSMTNTDTADVEGTIAQVAALSRAGSEMVRITVDRDEAAAAVPHIRDGLRKRGIATPLIGDFHYIGHKLLADHPACAEALDKYRINPGNVGFKDKR--------------------DKQFTDIVEMAIKYGKAVRIGANWGSLDQELLTHLM 171          
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_GEOTN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=ispG PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.551e-18
Identity = 55/119 (46.22%), Postives = 71/119 (59.66%), Query Frame = 3
Query:  294 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADR 647
            E IH   R KTR V VG++ IG  + + +Q+MTT  T DV  TV ++ R+ + G  +VR+    +R ADA  EIK     K  NIPLVADIHF   +AL+  E   DKIR+NPGN   R
Sbjct:    3 EIIH---RSKTRPVRVGSLTIGGNNEVIIQSMTTTKTHDVDATVAQIHRLEEAGCQIVRVACPDERAADAIPEIK-----KRINIPLVADIHFDYKLALKAIEGGVDKIRINPGNIGRR 113          
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_PSEU2 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=ispG PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.638e-18
Identity = 50/108 (46.30%), Postives = 70/108 (64.81%), Query Frame = 3
Query:  315 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGN 635
            RR++R + VG+V +G + PI VQ+MT +DT DVA TV ++ R+   G D+VR++V     A+A   IK  +      +PLVADIHF   +ALRVAE   D +R+NPGN
Sbjct:    9 RRESRKIWVGSVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRVSVPDMDAAEAFGRIKQLV-----KVPLVADIHFDHRIALRVAELGVDCLRINPGN 111          
The following BLAST results are available for this feature:
BLAST of EY665775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 424
Match NameE-valueIdentityDescription
ISPG_SULDN2.082e-1845.954-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_AZOSE2.082e-1842.974-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_PSEF52.719e-1846.304-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_METCA2.719e-1841.614-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_GEOSW2.719e-1846.224-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_WOLSU3.551e-1835.204-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_SULNB3.551e-1844.144-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_NITHX3.551e-1836.214-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_GEOTN3.551e-1846.224-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_PSEU24.638e-1846.304-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-D10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665775 ID=EY665775; Name=EY665775; organism=Citrus sinensis; type=EST; length=878bp
ATTTCTCTCTCAGAGTTAGTTCTCACTTCTCAGCATTATAAAAGGCGTAG
TATTTTGCAAAGATGGCGACTGGAACCCTGCCCGCTTCGTTTCCGGGCCT
CAAGAGCAGAGACCCGGGCTTGGGGTTTGCGAAAAGTGTGGATTTTGTGA
GAGTTTGTGATTTCAGAAAGTTCAAGTCTGGCAGAAGAAGATTCACTGTG
ATAAGGAATTCATCAAATTCCAGTTCGGATATCGCTGAGCTTCAGCCTGT
ATCAGAAGGAAGCCCACTGTTAGTTCCCAGACAAAAGTATTGTGAATCCA
TTCACAAAACTGTCAGAAGGAAGACTCGGACGGTGATGGTGGGAAATGTA
GCCATTGGCAGTGAGCATCCTATTAGAGTTCAAACAATGACTACAAATGA
CACTAAGGATGTTGCTGGAACAGTGGAAGAGGTAATGAGAATAGCAGACC
AGGGAGCAGATCTTGTTCGGATCACAGTTCAAGGGAAGAGAGAGGCAGAT
GCATGTTTTGAGATAAAAAACTCACTTGTCCAGAAAAACTACAATATACC
TCTGGTGGCAGATATTCATTTTGCCCCTTCTGTTGCTCTACGAGTTGCTG
AATGCTTTGACAAAATCCGTGTCAACCCAGGAAATTTTGCTGATAGACGG
GCTCAGTTTGAGCAGCTAGAGGACCCAGACGATGAGTATCAGAAAGAACT
TCAGCATATTGAGGAGGGTTTTATTCCATTGGGTGAGAATTGTAAAAAGT
ACGGAAGGGCCTGGCGTATTGGGCTAACCCTGGGGAACCCTTTCGAATTG
TTACATGAGCTACTTTAGGGATCCCTCCCAAGGGGATGCGTTTAATCTGC
CTTTTCGCTTTTTGAAAGAATCTTCGCG
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