CX675012

Overview
NameCX675012
Unique NameCX675012
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length808
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_THEEB (Hydroxyacylglutathione hydrolase OS=Thermosynechococcus elongatus (strain BP-1) GN=gloB PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.541e-36
Identity = 80/191 (41.88%), Postives = 107/191 (56.02%), Query Frame = 2
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARY-GAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQ 796
            + I  +  L DNY +LLHD  TGT  VVDP+E  PV+  L+     L  I               L++R+    V GS  D+ RIP   + L  GD+  F      V+  PGHTRGHI++Y P +  +F GDTLF   CG+LFEG+P QM  SL ++  LP++T V+C HEYT  N  FAL++E +N  LQ
Sbjct:    1 MMIYRLNALTDNYIFLLHDPQTGTAAVVDPAEPEPVLAKLAELGATLRAIFNTHHHWDHVGANCALRSRFPDIAVYGSSEDQGRIPEQTVFLKAGDRVPFGQTYFDVLFVPGHTRGHIAYYAPTTGDLFCGDTLFGGGCGRLFEGSPAQMLDSLNQLRQLPEETRVWCAHEYTQKNLSFALTVEADNPTLQ 191          
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_PSEFS (Hydroxyacylglutathione hydrolase OS=Pseudomonas fluorescens (strain SBW25) GN=gloB PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.318e-36
Identity = 82/187 (43.85%), Postives = 108/187 (57.75%), Query Frame = 2
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRK-NRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNN 784
            +QI  +P   DNY +LL D  T    VVDP +A PV+D L +     L+ I              +LK    AKV G   +K  IP  D+ LND D+    G +  +   PGHT GHI+FY  G   +  GDTLF+  CG+LFEGTP QM++SL+++ +LP DT VYC HEYT SN KFA ++EP+N
Sbjct:    2 IQISALPAFTDNYIWLLQDPHTQRCAVVDPGDAAPVLDWLEQNPGWALSDILVTHHHHDHVGGVEQLKGATNAKVYGPANEK--IPARDVALNDNDRITVLGWDFDIYTVPGHTLGHITFYHSG--VLLCGDTLFAAGCGRLFEGTPEQMYTSLERLAALPADTRVYCTHEYTQSNLKFAQAVEPDN 184          
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_ACICJ (Hydroxyacylglutathione hydrolase OS=Acidiphilium cryptum (strain JF-5) GN=gloB PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.318e-36
Identity = 80/192 (41.67%), Postives = 112/192 (58.33%), Query Frame = 2
Query:  233 IELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSYAA 808
            I  VP L DNYA+L+     G    VDP++A   I+A+      L ++              +L AR+GA++ G+  D  R+P +D  L  G      G  V +I TPGHT GH+++ F G AA   GDTLFSL CG++FEGTP Q  +SLQ + +L  +T + CGHEYTLSN++FA  ++P+N AL + AA
Sbjct:   10 ITRVPMLADNYAWLV--AHGGASAFVDPADAAAAIEAVEAAGGRLDWVLLTHHHDDHIAGAVDLAARFGARIAGNAADAARLPRLDAALAPGQTIDLGGEAVRMIATPGHTVGHVTYLF-GDAAAACGDTLFSLGCGRMFEGTPAQFHASLQALAALDPETLMLCGHEYTLSNARFARHVDPDNAALAARAA 198          
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_PHOPR (Hydroxyacylglutathione hydrolase OS=Photobacterium profundum GN=gloB PE=3 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 1.261e-35
Identity = 81/193 (41.97%), Postives = 108/193 (55.96%), Query Frame = 2
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARY-GAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSY 802
            L ++ +P   DNY +L+H+     V VVDP +A PV+  L  ++  L  I              ELK  Y    V+G     + IPGI   + DGD+    G    V+  PGHT GH+++   G   +F GDTLFS+ CG+LFEGTP QMF SL+K+ +LPD+T +YC HEYT SN  FAL  E +N  LQ Y
Sbjct:    2 LTVQSIPAFNDNYIWLIHNSHNHCV-VVDPGDATPVLKVLEEQSLTLDAILITHHHHDHIGGISELKRHYPNLNVVGPA--SEPIPGISQSVEDGDQVELFGERFMVLGVPGHTLGHVAYV--GDGKLFCGDTLFSVGCGRLFEGTPAQMFQSLKKLAALPDETEIYCAHEYTSSNLAFALVAEQDNPHLQRY 189          
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_GLOVI (Hydroxyacylglutathione hydrolase OS=Gloeobacter violaceus GN=gloB PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.261e-35
Identity = 81/182 (44.51%), Postives = 103/182 (56.59%), Query Frame = 2
Query:  251 LRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARY-GAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEAL 793
            L+DNY ++L D    T  VVDP+EA PV++AL R    L  I              EL   Y G  V  S  D+ RIPG  + L DGD   F      VI  PGHT GHI+++F G   +F GDTLF+  CG+LFEGT  QM  SL ++  LP +T V+C HEYTL N +FA ++EP+N  L
Sbjct:    9 LKDNYVFVLEDEAARTAAVVDPAEARPVLEALVRLGLKLVAIFNTHHHHDHVGGNRELLEAYPGIAVYASRRDRGRIPGQTVELEDGDTVAFGCERARVIFVPGHTHGHIAYHFAGCGHLFCGDTLFAGGCGRLFEGTARQMQHSLGRLRELPGETQVWCAHEYTLGNLRFAHTLEPDNAEL 190          
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_CHRSD (Hydroxyacylglutathione hydrolase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=gloB PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.791e-35
Identity = 81/188 (43.09%), Postives = 107/188 (56.91%), Query Frame = 2
Query:  242 VPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAV-FTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSY 802
            +P  +DNY +LL    +  V +VDP +A PVI+ L R+  +L  I               L  RY  +VIG   D   IP ID V+ D D+    G    V   PGHT  HI+FY PG+  + F GDTLFS  CG+LFEGT  QM  SL ++ +LPDDT V+ GHEYTL+N +FA + EP+N A  ++
Sbjct:    7 IPAFQDNYIWLLRQDASDKVVIVDPGDAQPVIEYLEREGLSLAAILVTHHHHDHTGGIDALVKRYSPRVIGP--DNSAIPAIDEVVGDEDECRVQGRRFEVFAVPGHTLDHIAFYAPGTPGLLFCGDTLFSGGCGRLFEGTAEQMHRSLARLAALPDDTLVFAGHEYTLANLRFAQAAEPDNPARDAH 192          
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_PSEAE (Hydroxyacylglutathione hydrolase OS=Pseudomonas aeruginosa GN=gloB PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.258e-35
Identity = 81/192 (42.19%), Postives = 111/192 (57.81%), Query Frame = 2
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALS-RKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAV-FTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQ 796
            +QI+ +P   DNY +LL D  +    VVDP +A PV   L+   +  L+ I               LK   GA+V+G   +K  IP  D+ L DG++    G    +   PGHT GHI++Y P    + F GDTLF+  CG+LFEGTP QM  SL ++ +LP +T VYC HEYTLSN +FAL++EP+N AL+
Sbjct:    2 IQIDALPAFNDNYIWLLQDATSRRCAVVDPGDAKPVEAWLAAHPDWRLSDILVTHHHHDHVGGVAALKELTGARVLGPANEK--IPARDLALEDGERVEVLGLVFEIFHVPGHTLGHIAYYHPAETPLLFCGDTLFAAGCGRLFEGTPAQMHHSLARLAALPANTRVYCTHEYTLSNLRFALAVEPDNAALR 191          
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_PSEA8 (Hydroxyacylglutathione hydrolase OS=Pseudomonas aeruginosa (strain LESB58) GN=gloB PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.258e-35
Identity = 81/192 (42.19%), Postives = 111/192 (57.81%), Query Frame = 2
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALS-RKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAV-FTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQ 796
            +QI+ +P   DNY +LL D  +    VVDP +A PV   L+   +  L+ I               LK   GA+V+G   +K  IP  D+ L DG++    G    +   PGHT GHI++Y P    + F GDTLF+  CG+LFEGTP QM  SL ++ +LP +T VYC HEYTLSN +FAL++EP+N AL+
Sbjct:    2 IQIDALPAFNDNYIWLLQDATSRRCAVVDPGDAKPVEAWLAAHPDWRLSDILVTHHHHDHVGGVAALKELTGARVLGPANEK--IPARDLALEDGERVEVLGLVFEIFHVPGHTLGHIAYYHPAETPLLFCGDTLFAAGCGRLFEGTPAQMHHSLARLAALPANTRVYCTHEYTLSNLRFALAVEPDNAALR 191          
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_SHEB5 (Hydroxyacylglutathione hydrolase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=gloB PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 8.173e-35
Identity = 85/196 (43.37%), Postives = 107/196 (54.59%), Query Frame = 2
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFA----GHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSY 802
            L I  +    DNY ++L       V VVDP +A  VID L      L  I              EL+A    ++   G D ++I GI   LN   +  F       E+ V+D PGHT GHI++    + A+F GDTLFS  CG+LFEGTP QM +SLQ++  LP DT VYC HEYTLSN KFAL++ PNN ALQ Y
Sbjct:    2 LTITAIKAFNDNYIWVLQQQPHTQVYVVDPGDASVVIDYLEANQLTLAGILLTHHHNDHTGGVAELQAYSQNRLTVYGPDNEKIEGITHPLNATAQPRFILDYMSGELQVLDVPGHTAGHIAYVI--ADALFCGDTLFSAGCGRLFEGTPAQMLNSLQQLAQLPADTRVYCAHEYTLSNLKFALAVNPNNRALQDY 195          
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_ERYLH (Hydroxyacylglutathione hydrolase OS=Erythrobacter litoralis (strain HTCC2594) GN=gloB PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 8.173e-35
Identity = 71/192 (36.98%), Postives = 107/192 (55.73%), Query Frame = 2
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSY 802
            L+I   PCL DNY +LLHD D+G    +D  +    +     K   +T+I              ++    GAKVI    + +++ GID V+  GD          VID  GHT GHI+++ P +   F GD++F+L CG++FEG P Q + SL +I +LP +T +YC HEYT +N++FA+  +P N+AL +Y
Sbjct:    2 LEIHQFPCLSDNYGFLLHDPDSGETAAIDTPDGKEYLKQAKAKGWTITHIWNTHWHPDHAGGNKDIVEATGAKVIAPQ-EVEKLSGIDRVVGHGDTVDIGDFTADVIDVSGHTNGHIAYHLPEAGIAFVGDSVFALGCGRMFEGEPKQFWDSLSRIKALPPETMLYCAHEYTAANARFAVHADPENDALVAY 192          
The following BLAST results are available for this feature:
BLAST of CX675012 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 281
Match NameE-valueIdentityDescription
GLO2_THEEB2.541e-3641.88Hydroxyacylglutathione hydrolase OS=Thermosynechoc... [more]
GLO2_PSEFS3.318e-3643.85Hydroxyacylglutathione hydrolase OS=Pseudomonas fl... [more]
GLO2_ACICJ3.318e-3641.67Hydroxyacylglutathione hydrolase OS=Acidiphilium c... [more]
GLO2_PHOPR1.261e-3541.97Hydroxyacylglutathione hydrolase OS=Photobacterium... [more]
GLO2_GLOVI1.261e-3544.51Hydroxyacylglutathione hydrolase OS=Gloeobacter vi... [more]
GLO2_CHRSD4.791e-3543.09Hydroxyacylglutathione hydrolase OS=Chromohalobact... [more]
GLO2_PSEAE6.258e-3542.19Hydroxyacylglutathione hydrolase OS=Pseudomonas ae... [more]
GLO2_PSEA86.258e-3542.19Hydroxyacylglutathione hydrolase OS=Pseudomonas ae... [more]
GLO2_SHEB58.173e-3543.37Hydroxyacylglutathione hydrolase OS=Shewanella bal... [more]
GLO2_ERYLH8.173e-3536.98Hydroxyacylglutathione hydrolase OS=Erythrobacter ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_59B01_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-59B01-C1-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675012 ID=CX675012; Name=CX675012; organism=Citrus sinensis; type=EST; length=808bp
GATGCAAATGATCTCCAGAGCATCATCTGCTGCCATGGCCTCCTTCACTT
GTTCAAGGGGGCAGAGTGGCCTTTGTGTTGTGCCAGGACCAAGACAACTT
TGCCTTAGAAAGGGTCTTCTGTATGGTTTCATGCGCTTATTATCAATGCC
ATTCAAGACATTGCATTTAGCAAGTCGATCTCTTAGAGTTGCTGAGTTTT
GCAGTATCTCCAACATGTCATCATCGTTGCAAATTGAGTTGGTACCGTGT
CTCAGGGACAACTATGCATATCTTTTACATGACATGGACACAGGTACTGT
TGGAGTTGTTGATCCTTCTGAAGCTGTTCCTGTGATAGATGCTTTGAGTA
GGAAAAACCGAAATCTGACTTACATTCTAAATACACATCATCATCATGAT
CACACCGGTGGTAATTTGGAGCTAAAAGCAAGGTACGGTGCAAAGGTGAT
TGGTTCAGGAGTAGACAAGGATAGGATCCCTGGCATTGATATAGTTTTGA
ATGATGGAGACAAATGGATGTTTGCTGGTCATGAGGTGCATGTGATTGAT
ACGCCTGGCCATACCCGAGGTCATATTAGCTTCTACTTTCCTGGATCAGC
GGCAGTTTTTACTGGGGACACCTTGTTCAGCTTATCCTGTGGCAAGCTTT
TTGAAGGAACCCCTGGGCAGATGTTTTCTTCCCTTCAGAAGATAATGTCT
CTGCCAGATGATACAAATGTATATTGTGGTCATGAATATACGCTGAGTAA
TTCAAAATTTGCATTGTCCATAGAACCCAACAATGAGGCCCTTCAATCAT
ATGCAGCG
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