CX675012

Overview
NameCX675012
Unique NameCX675012
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length808
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX675012_ssr386 microsatellite CX675012_ssr386:386..397. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig10372 contig Csv1_Contig10372:61..868. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_PSEPK (Hydroxyacylglutathione hydrolase OS=Pseudomonas putida (strain KT2440) GN=gloB PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.485e-33
Identity = 79/193 (40.93%), Postives = 110/193 (56.99%), Query Frame = 2 
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNR-NLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYF--PGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQ 796
            +QIE +P   DNY +LL D       VVDP +A PV   L+      L+ I               L+   GA+V G     +RIPG D+ L++GD+    G    V+  PGHT GHI+F+   P +  +F+GDTLF+  CG++FEGTP QM  +L ++ +LP+ T VYC HEYTLSN +FA ++EP N  +Q
Sbjct:    2 IQIEALPAFSDNYIWLLQDTAKRRCAVVDPGDAGPVERWLAANPEWVLSDILVTHHHNDHVGGVERLRQLTGARVCGPA--NERIPGRDLALDEGDRVDVLGVTFQVMAVPGHTLGHIAFFSDQPATPILFSGDTLFAAGCGRMFEGTPEQMQPALARLAALPEQTQVYCAHEYTLSNLRFAKAVEPTNPHVQ 192
[Close]
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_ECOSM (Hydroxyacylglutathione hydrolase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=gloB PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.857e-33
Identity = 77/192 (40.10%), Postives = 111/192 (57.81%), Query Frame = 2 
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSY 802
            + +  +P   DNY ++L+D + G   +VDP +A PV++A++  N     I              EL  ++  +++  G  + +  G   V+ DG+     GHE  VI TPGHT GHI ++      +F GDTLFS  CG+LFEGT  QM+ SL+K+ +LPDDT V C HEYTLSN KFALSI P++ ++  Y
Sbjct:    1 MNLNSIPAFDDNYIWVLND-EAGRCLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVKKF-PQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIATPGHTLGHICYF--SKPYLFCGDTLFSGGCGRLFEGTASQMYQSLKKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDY 188
[Close]
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_ECOLI (Hydroxyacylglutathione hydrolase OS=Escherichia coli (strain K12) GN=gloB PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.857e-33
Identity = 77/192 (40.10%), Postives = 111/192 (57.81%), Query Frame = 2 
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSY 802
            + +  +P   DNY ++L+D + G   +VDP +A PV++A++  N     I              EL  ++  +++  G  + +  G   V+ DG+     GHE  VI TPGHT GHI ++      +F GDTLFS  CG+LFEGT  QM+ SL+K+ +LPDDT V C HEYTLSN KFALSI P++ ++  Y
Sbjct:    1 MNLNSIPAFDDNYIWVLND-EAGRCLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVEKF-PQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIATPGHTLGHICYF--SKPYLFCGDTLFSGGCGRLFEGTASQMYQSLKKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDY 188
[Close]
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_ECOL6 (Hydroxyacylglutathione hydrolase OS=Escherichia coli O6 GN=gloB PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.857e-33
Identity = 76/192 (39.58%), Postives = 111/192 (57.81%), Query Frame = 2 
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSY 802
            + +  +P   DNY ++L+D + G   +VDP +A PV++A++  N     I              EL  ++  +++  G  + +  G   V+ D +     GHE  VI TPGHT GHI ++      +F GDTLFS  CG+LFEGTP QM+ S++K+ +LPDDT V C HEYTLSN KFALSI P++ ++  Y
Sbjct:    1 MNLNSIPAFDDNYIWVLND-EAGRCLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVKKF-PQIVVYGPQETQDKGTTQVVKDSETAFVLGHEFSVIATPGHTLGHICYF--SKPYLFCGDTLFSGGCGRLFEGTPSQMYQSIKKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDY 188
[Close]
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_ECOHS (Hydroxyacylglutathione hydrolase OS=Escherichia coli O9:H4 (strain HS) GN=gloB PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.857e-33
Identity = 77/192 (40.10%), Postives = 111/192 (57.81%), Query Frame = 2 
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSY 802
            + +  +P   DNY ++L+D + G   +VDP +A PV++A++  N     I              EL  ++  +++  G  + +  G   V+ DG+     GHE  VI TPGHT GHI ++      +F GDTLFS  CG+LFEGT  QM+ SL+K+ +LPDDT V C HEYTLSN KFALSI P++ ++  Y
Sbjct:    1 MNLNSIPAFDDNYIWVLND-EAGRCLIVDPGDAEPVLNAITANNWQPEAIFLTHHHHDHVGGVKELVEKF-PQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIATPGHTLGHICYF--SKPYLFCGDTLFSGGCGRLFEGTASQMYQSLKKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDY 188
[Close]
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_ECODH (Hydroxyacylglutathione hydrolase OS=Escherichia coli (strain K12 / DH10B) GN=gloB PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.857e-33
Identity = 77/192 (40.10%), Postives = 111/192 (57.81%), Query Frame = 2 
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSY 802
            + +  +P   DNY ++L+D + G   +VDP +A PV++A++  N     I              EL  ++  +++  G  + +  G   V+ DG+     GHE  VI TPGHT GHI ++      +F GDTLFS  CG+LFEGT  QM+ SL+K+ +LPDDT V C HEYTLSN KFALSI P++ ++  Y
Sbjct:    1 MNLNSIPAFDDNYIWVLND-EAGRCLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVEKF-PQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIATPGHTLGHICYF--SKPYLFCGDTLFSGGCGRLFEGTASQMYQSLKKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDY 188
[Close]
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_ECOBW (Hydroxyacylglutathione hydrolase OS=Escherichia coli (strain K12 / BW2952) GN=gloB PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.857e-33
Identity = 77/192 (40.10%), Postives = 111/192 (57.81%), Query Frame = 2 
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSY 802
            + +  +P   DNY ++L+D + G   +VDP +A PV++A++  N     I              EL  ++  +++  G  + +  G   V+ DG+     GHE  VI TPGHT GHI ++      +F GDTLFS  CG+LFEGT  QM+ SL+K+ +LPDDT V C HEYTLSN KFALSI P++ ++  Y
Sbjct:    1 MNLNSIPAFDDNYIWVLND-EAGRCLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVEKF-PQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIATPGHTLGHICYF--SKPYLFCGDTLFSGGCGRLFEGTASQMYQSLKKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDY 188
[Close]
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_ECO7I (Hydroxyacylglutathione hydrolase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=gloB PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.857e-33
Identity = 77/192 (40.10%), Postives = 111/192 (57.81%), Query Frame = 2 
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSY 802
            + +  +P   DNY ++L+D + G   +VDP +A PV++A++  N     I              EL  ++  +++  G  + +  G   V+ DG+     GHE  VI TPGHT GHI ++      +F GDTLFS  CG+LFEGT  QM+ SL+K+ +LPDDT V C HEYTLSN KFALSI P++ ++  Y
Sbjct:    1 MNLNSIPAFDDNYIWVLND-EAGRCLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVKKF-PQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIATPGHTLGHICYF--SKPYLFCGDTLFSGGCGRLFEGTASQMYQSLKKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDY 188
[Close]
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_ECO5E (Hydroxyacylglutathione hydrolase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=gloB PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.857e-33
Identity = 77/192 (40.10%), Postives = 111/192 (57.81%), Query Frame = 2 
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSY 802
            + +  +P   DNY ++L+D + G   +VDP +A PV++A++  N     I              EL  ++  +++  G  + +  G   V+ DG+     GHE  VI TPGHT GHI ++      +F GDTLFS  CG+LFEGT  QM+ SL+K+ +LPDDT V C HEYTLSN KFALSI P++ ++  Y
Sbjct:    1 MNLNSIPAFDDNYIWVLND-EAGRCLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVEKF-PQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIATPGHTLGHICYF--SKPYLFCGDTLFSGGCGRLFEGTASQMYQSLKKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDY 188
[Close]
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_ECO57 (Hydroxyacylglutathione hydrolase OS=Escherichia coli O157:H7 GN=gloB PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.857e-33
Identity = 77/192 (40.10%), Postives = 111/192 (57.81%), Query Frame = 2 
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSY 802
            + +  +P   DNY ++L+D + G   +VDP +A PV++A++  N     I              EL  ++  +++  G  + +  G   V+ DG+     GHE  VI TPGHT GHI ++      +F GDTLFS  CG+LFEGT  QM+ SL+K+ +LPDDT V C HEYTLSN KFALSI P++ ++  Y
Sbjct:    1 MNLNSIPAFDDNYIWVLND-EAGRCLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVEKF-PQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIATPGHTLGHICYF--SKPYLFCGDTLFSGGCGRLFEGTASQMYQSLKKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDY 188
The following BLAST results are available for this feature:
BLAST of CX675012 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 281
Match NameE-valueIdentityDescription
GLO2_PSEPK4.485e-3340.93Hydroxyacylglutathione hydrolase OS=Pseudomonas pu... [more]
GLO2_ECOSM5.857e-3340.10Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_ECOLI5.857e-3340.10Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_ECOL65.857e-3339.58Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_ECOHS5.857e-3340.10Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_ECODH5.857e-3340.10Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_ECOBW5.857e-3340.10Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_ECO7I5.857e-3340.10Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_ECO5E5.857e-3340.10Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_ECO575.857e-3340.10Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_59B01_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-59B01-C1-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675012 ID=CX675012; Name=CX675012; organism=Citrus sinensis; type=EST; length=808bp
GATGCAAATGATCTCCAGAGCATCATCTGCTGCCATGGCCTCCTTCACTT
GTTCAAGGGGGCAGAGTGGCCTTTGTGTTGTGCCAGGACCAAGACAACTT
TGCCTTAGAAAGGGTCTTCTGTATGGTTTCATGCGCTTATTATCAATGCC
ATTCAAGACATTGCATTTAGCAAGTCGATCTCTTAGAGTTGCTGAGTTTT
GCAGTATCTCCAACATGTCATCATCGTTGCAAATTGAGTTGGTACCGTGT
CTCAGGGACAACTATGCATATCTTTTACATGACATGGACACAGGTACTGT
TGGAGTTGTTGATCCTTCTGAAGCTGTTCCTGTGATAGATGCTTTGAGTA
GGAAAAACCGAAATCTGACTTACATTCTAAATACACATCATCATCATGAT
CACACCGGTGGTAATTTGGAGCTAAAAGCAAGGTACGGTGCAAAGGTGAT
TGGTTCAGGAGTAGACAAGGATAGGATCCCTGGCATTGATATAGTTTTGA
ATGATGGAGACAAATGGATGTTTGCTGGTCATGAGGTGCATGTGATTGAT
ACGCCTGGCCATACCCGAGGTCATATTAGCTTCTACTTTCCTGGATCAGC
GGCAGTTTTTACTGGGGACACCTTGTTCAGCTTATCCTGTGGCAAGCTTT
TTGAAGGAACCCCTGGGCAGATGTTTTCTTCCCTTCAGAAGATAATGTCT
CTGCCAGATGATACAAATGTATATTGTGGTCATGAATATACGCTGAGTAA
TTCAAAATTTGCATTGTCCATAGAACCCAACAATGAGGCCCTTCAATCAT
ATGCAGCG
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