EY665769

Overview
NameEY665769
Unique NameEY665769
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665769 vs. ExPASy Swiss-Prot
Match: ERD23_HUMAN (ER lumen protein retaining receptor 3 OS=Homo sapiens GN=KDELR3 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.900e-37
Identity = 79/163 (48.47%), Postives = 120/163 (73.62%), Query Frame = 1
Query:   61 MNLFRLVGDMTHLLSIVVLLLKIRTTKSCAGISLKTQELYVLVFLSRYLFFFTRYISLYNSIMKLVFIGTSIAIVWYMRYHKVVKQTYNKDEDTFKHYFLILPSFVLALLIPHAFNSVEILWTFSIYLEAVAILPQLVLLQRSRNIDNLTGNYVFLLGAYRAL 549
            MN+FR++GD++HLL++++LL KI  +K C GIS K+Q L+ LVF +RYL  FT +IS+YN++MK+VF+  +   V YM Y K  ++T++ + DTF+  FL++P   L+ L  ++F  +EILWTFSIYLE+VAILPQL ++ ++   + +T +Y+F LG YRAL
Sbjct:    1 MNVFRILGDLSHLLAMILLLGKIWRSKCCKGISGKSQILFALVFTTRYLDLFTNFISIYNTVMKVVFLLCAYVTV-YMIYGK-FRKTFDSENDTFRLEFLLVPVIGLSFLENYSFTLLEILWTFSIYLESVAILPQLFMISKTGEAETITTHYLFFLGLYRAL 161          
BLAST of EY665769 vs. ExPASy Swiss-Prot
Match: ERD2_YEAST (ER lumen protein retaining receptor OS=Saccharomyces cerevisiae GN=ERD2 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.103e-36
Identity = 74/170 (43.53%), Postives = 113/170 (66.47%), Query Frame = 1
Query:   61 MNLFRLVGDMTHLLSIVVLLLKIRTTKSCAGISLKTQELYVLVFLSRYLFFFT-RYISLYNSIMKLVFIGTSIAIVWYMRYHKVVKQ-TYNKD--EDTFKHYFLILPSFVLALLIPHAFNSVEILWTFSIYLEAVAILPQLVLLQRSRNIDNLTGNYVFLLGAYRAL*YP 558
            MN FR++GD++HL SI++L+  I+TT+   GIS KTQ LY LVF++RYL   T  ++SLYN++MK+ FI ++  IV  ++  K      YN+    DTFK   L++ S ++++   H F  +E+ W+FS++LE+VAILPQL +L +     +LT +Y+F +G YRAL  P
Sbjct:    1 MNPFRILGDLSHLTSILILIHNIKTTRYIEGISFKTQTLYALVFITRYLDLLTFHWVSLYNALMKIFFIVSTAYIVVLLQGSKRTNTIAYNEMLMHDTFKIQHLLIGSALMSVFFHHKFTFLELAWSFSVWLESVAILPQLYMLSKGGKTRSLTVHYIFAMGLYRALYIP 170          

HSP 2 Score: 38.1206 bits (87), Expect = 1.103e-36
Identity = 19/39 (48.72%), Postives = 24/39 (61.54%), Query Frame = 2
Query:  554 ILNWAYRFYVEDHKVRWKPWLFGAGLQTALYADFFYYYF 670
            I NW +R+  ED K+  K   F   LQT LY+DFFY Y+
Sbjct:  169 IPNWIWRYSTEDKKLD-KIAFFAGLLQTLLYSDFFYIYY 206          
BLAST of EY665769 vs. ExPASy Swiss-Prot
Match: ERD2_SCHPO (ER lumen protein retaining receptor OS=Schizosaccharomyces pombe GN=erd2 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.840e-32
Identity = 73/166 (43.98%), Postives = 112/166 (67.47%), Query Frame = 1
Query:   61 MNLFRLVGDMTHLLSIVVLLLKIRTTKSCAGISLKTQELYVLVFLSRYLFFFTRYISLYNSIMKLVFIGTSIAIVWYMRYHKVVKQTYNKDEDTFKHYFLILPSFVLALLIPHAFNSVEILWTFSIYLEAVAILPQLVLLQRSRNIDNLTGNYVFLLGAYRAL*YP 558
            M  F  +GDM HL +I +LL +++ +K+C+G+SLK+  L++LV+++RYL  F RY SLY  +M++VFI +   I + M     ++ TY+K  DTF+  +++    VLAL+ P ++    ILWTFSI+LE+VAILPQL +LQRS   ++LT +Y+F +  YR L  P
Sbjct:    1 MTFFSALGDMAHLAAIFLLLHRMKKSKTCSGLSLKSHLLFLLVYVTRYLNLFWRYKSLYYFLMRIVFIASESYICYLMLM--TLRPTYDKRLDTFRTEYILGGCAVLALIYPTSYTISNILWTFSIWLESVAILPQLFMLQRSGETESLTAHYLFAMCLYRGLYIP 164          
The following BLAST results are available for this feature:
BLAST of EY665769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
ERD23_HUMAN1.900e-3748.47ER lumen protein retaining receptor 3 OS=Homo sapi... [more]
ERD2_YEAST1.103e-3643.53ER lumen protein retaining receptor OS=Saccharomyc... [more]
ERD2_SCHPO1.840e-3243.98ER lumen protein retaining receptor OS=Schizosacch... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-D04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665769 ID=EY665769; Name=EY665769; organism=Citrus sinensis; type=EST; length=851bp
GAAAAAAAGAAGAGCTTAAAAGAAAAGAGGGAAGTGAAAGAAAAATTACA
ACAAAGAATCATGAACTTGTTTAGATTGGTCGGGGACATGACCCACCTCC
TTAGTATAGTGGTCCTTCTACTCAAAATTCGTACTACGAAATCATGTGCA
GGAATTTCACTCAAGACTCAAGAACTGTATGTCTTAGTGTTTCTTTCTCG
GTATCTCTTCTTCTTCACGAGATACATCTCTCTCTACAACTCCATAATGA
AGCTAGTCTTTATTGGAACTTCAATAGCTATTGTTTGGTACATGCGATAC
CACAAAGTTGTGAAGCAGACCTATAACAAGGACGAAGACACATTCAAACA
CTATTTTCTGATTCTCCCGAGTTTTGTCTTGGCCCTTCTGATTCCCCATG
CCTTTAATTCGGTTGAGATTCTGTGGACATTTTCAATTTATCTTGAAGCA
GTGGCAATCTTACCACAGCTGGTATTGCTGCAACGGTCAAGGAACATTGA
CAACTTAACTGGAAATTATGTCTTTCTTCTCGGTGCTTACCGAGCTTTAT
AATATCCTCAACTGGGCTTACCGTTTCTATGTGGAGGATCACAAAGTCCG
CTGGAAACCCTGGCTTTTCGGGGCTGGGCTCCAGACTGCTCTTTATGCTG
ACTTTTTTTATTACTACTTTAAGAGCTGGAAAAAACCGGGAATTTCTCAA
GCTGGCTGGCTGGAATGGGAGTTTTCTTGTTTCAAAGGTTTACGGCATTT
TTAAAAAAACAAAAAAATTTATATTTTTCTAATTTGGGTTTTTAATAACC
GGAAGGTTGTGCTGGCGAGGAAGGGCCTCTAAATTTTTTTGATAAGGGGG
G
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