EY665768

Overview
NameEY665768
Unique NameEY665768
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY665768 vs. ExPASy Swiss-Prot
Match: RS17E_META3 (30S ribosomal protein S17e OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps17e PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.930e-11
Identity = 29/61 (47.54%), Postives = 46/61 (75.41%), Query Frame = 1 
Query:  118 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRI 300
            MGR+R   +K++   ++E+Y  R+T DF TNKK+++EVA I +KRLRN++AG+ T  MK++
Sbjct:    1 MGRIRQTFIKRAGEDLVEKYEDRLTTDFETNKKVIDEVAEIATKRLRNRVAGYVTKKMKKV 61
The following BLAST results are available for this feature:
BLAST of EY665768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
RS17E_META31.930e-1147.5430S ribosomal protein S17e OS=Methanococcus aeolic... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-D03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665768 ID=EY665768; Name=EY665768; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGCCCACGCGTCCGCTTCGCTTTAGCTGCCGCAATCTCTCG
ACATCTCAAGCTCTTCTGCTTCACCGTCTTTGTCTTCTTCAAGACAGCAG
CAGCTTCTTAAACTGAAATGGGTCGTGTTCGTACCAAGACCGTGAAGAAG
TCCTCTCGCCAGGTGATTGAGAGGTACTACTCAAGAATGACACTGGACTT
CCATACCAACAAGAAAATTTTGGAGGAGGTTGCTATCATCCCCTCGAAGA
GGCTGCGTAACAAAATTGCTGGGTTCTCAACCCATTTGATGAAGAGGATT
CAGAAGGGTCCAGTTCGTGGAATCTCCCTTAAATTGCAGGAAGAGGAGCG
CGAACGCCGCATGGACTTTGTGCCTGATGAGTCAGCTATTAAGACTGATG
AAATTAAGGTTGACAAGGAAACCTTGGATATGCTTGCTGCTCTTGGCATG
TCCGACATTTCTGGGCTTGTTGAAGTTGAGCCACAGAGCATGATTACTCC
TCCAGTTTTTGGTCGGGGTGGTGGCAGGAGGTACTGAGTTAATTGAGGCT
TTGTGGCTCAATCAAGAATGAGAAGTTTAGGTTCTTATTAATTCAGTACT
TCTTGTGTTTGTTATTGAATGGTTTTTGTGGACTAAGTTTTCCTTTACTA
TTCTTAAGAAAGGGCGTTTAGGTAAAAATTGAACTCTGGGCATCATACTT
TACTCGTTTAACGGGATTGGATTTGTCCTCTCCGAAGAAAAATAAAAAAA
AAGGGAGGCCGTGCACGAGGGGTGCGGGTTGAGTTAAACCGTCTTGCGGG
GTCACACAATCCTCTACCTGCGTTCGACGCACGATTCATTGTCCCAGCCA
CCCCCTATGCCGCATTTCTAGCCCCTGACGACAAACCC
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