CX674999
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674999 vs. ExPASy Swiss-Prot
Match: RTF23_SCHPO (Retrotransposable element Tf2 155 kDa protein type 3 OS=Schizosaccharomyces pombe GN=Tf2-11 PE=4 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.004e-15 Identity = 49/151 (32.45%), Postives = 81/151 (53.64%), Query Frame = -2 Query: 14 RYEAINGEVEKLLRAGFIREVNYPEWISNVVLVKKANGKWRMCVDFTGLNKACPKDSFPLPKIDQLVDSTAGHALLSFMDAFSGYNQIPMYEQDEESTAFITNKGLFCYRVMPFGLKNAGATYQRLVNKVFKPLIGKTMEVYVDDMITKSK 466 + +A+N E+ + L++G IRE V+ V K G RM VD+ LNK + +PLP I+QL+ G + + +D S Y+ I + + DE AF +G+F Y VMP+G+ A A +Q +N + + + Y+D+++ SK Sbjct: 424 KMQAMNDEINQGLKSGIIRESKAIN-ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISIAPAHFQYFINTILGEVKESHVVCYMDNILIHSK 573
BLAST of CX674999 vs. ExPASy Swiss-Prot
Match: RTF22_SCHPO (Retrotransposable element Tf2 155 kDa protein type 2 OS=Schizosaccharomyces pombe GN=Tf2-7 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.004e-15 Identity = 49/151 (32.45%), Postives = 81/151 (53.64%), Query Frame = -2 Query: 14 RYEAINGEVEKLLRAGFIREVNYPEWISNVVLVKKANGKWRMCVDFTGLNKACPKDSFPLPKIDQLVDSTAGHALLSFMDAFSGYNQIPMYEQDEESTAFITNKGLFCYRVMPFGLKNAGATYQRLVNKVFKPLIGKTMEVYVDDMITKSK 466 + +A+N E+ + L++G IRE V+ V K G RM VD+ LNK + +PLP I+QL+ G + + +D S Y+ I + + DE AF +G+F Y VMP+G+ A A +Q +N + + + Y+D+++ SK Sbjct: 424 KMQAMNDEINQGLKSGIIRESKAIN-ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISIAPAHFQYFINTILGEVKESHVVCYMDNILIHSK 573
BLAST of CX674999 vs. ExPASy Swiss-Prot
Match: POL_CAMVE (Enzymatic polyprotein OS=Cauliflower mosaic virus (strain BBC) GN=ORF V PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.696e-14 Identity = 75/272 (27.57%), Postives = 133/272 (48.90%), Query Frame = -2 Query: 5 KAMETGEAMQITSLDTRVENKNGRQEPVEDLETVSLGPENPGKTIRI---GSRLKGEQKQELVKCLQAHADVFAWTHEDMPGIDPEVACH--KLAIKKG--ARAVRQKRRCFNQERYEAINGEVEKLLRAGFIREVNYPEWISNVVL---VKKANGKWRMCVDFTGLNKACPKDSFPLPKIDQLVDSTAGHALLSFMDAFSGYNQIPMYEQDEESTAFITNKGLFCYRVMPFGLKNAGATYQRLVNKVFKPLIGKTMEVYVDDMITKSKIRE 790 +A+ G + S+ R +K + EPV ++ T + ENP K I I G RL E+ + +Q ++ + P +DP K +IK ++A++ K ++ E + ++++LL I+ P ++ +K GK RM V++ +NKA D++ LP D+L+ G + S D SG+ Q+ + ++ TAF +G + + V+PFGLK A + +QR +++ F+ + K VYVDD++ S E Sbjct: 149 RAVRVGTEGFLESMKKR--SKTQQPEPV-NISTNKI--ENPLKEIAILSEGRRLSEEKLFITQQRMQKIEELLEKVCSENP-LDPNKTKQWMKASIKLSDPSKAIKVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATIGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQAPSIFQRHMDEAFR-VFRKFCCVYVDDILVFSNNEE 413
BLAST of CX674999 vs. ExPASy Swiss-Prot
Match: POL_CAMVS (Enzymatic polyprotein OS=Cauliflower mosaic virus (strain Strasbourg) GN=ORF V PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.779e-14 Identity = 74/272 (27.21%), Postives = 133/272 (48.90%), Query Frame = -2 Query: 5 KAMETGEAMQITSLDTRVENKNGRQEPVEDLETVSLGPENPGKTIRI---GSRLKGEQKQELVKCLQAHADVFAWTHEDMPGIDPEVACH--KLAIKKG--ARAVRQKRRCFNQERYEAINGEVEKLLRAGFIREVNYPEWISNVVL---VKKANGKWRMCVDFTGLNKACPKDSFPLPKIDQLVDSTAGHALLSFMDAFSGYNQIPMYEQDEESTAFITNKGLFCYRVMPFGLKNAGATYQRLVNKVFKPLIGKTMEVYVDDMITKSKIRE 790 +A+ G + S+ R +K + EPV ++ T + ENP + I I G RL E+ + +Q ++ + P +DP K +IK ++A++ K ++ E + ++++LL I+ P ++ +K GK RM V++ +NKA D++ LP D+L+ G + S D SG+ Q+ + ++ TAF +G + + V+PFGLK A + +QR +++ F+ + K VYVDD++ S E Sbjct: 149 RAVRVGTEGFLESMKKR--SKTQQPEPV-NISTNKI--ENPLEEIAILSEGRRLSEEKLFITQQRMQKIEELLEKVCSENP-LDPNKTKQWMKASIKLSDPSKAIKVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQAPSIFQRHMDEAFR-VFRKFCCVYVDDILVFSNNEE 413
BLAST of CX674999 vs. ExPASy Swiss-Prot
Match: POL_CAMVC (Enzymatic polyprotein OS=Cauliflower mosaic virus (strain CM-1841) GN=ORF V PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.418e-14 Identity = 70/253 (27.67%), Postives = 125/253 (49.41%), Query Frame = -2 Query: 5 NKNGRQEPVEDLETVSLGPENPGKTIRI---GSRLKGEQKQELVKCLQAHADVFAWTHEDMPGIDPEVACH--KLAIKKG--ARAVRQKRRCFNQERYEAINGEVEKLLRAGFIREVNYPEWISNVVL---VKKANGKWRMCVDFTGLNKACPKDSFPLPKIDQLVDSTAGHALLSFMDAFSGYNQIPMYEQDEESTAFITNKGLFCYRVMPFGLKNAGATYQRLVNKVFKPLIGKTMEVYVDDMITKSKIRE 733 +K + EPV ++ T + ENP + I I G RL E+ + +Q ++ + P +DP K +IK ++A++ K ++ E + ++++LL I+ P ++ +K GK RM V++ +NKA D++ LP D+L+ G + S D SG+ Q+ + ++ TAF +G + + V+PFGLK A + +QR +++ F+ + K VYVDD++ S E Sbjct: 166 SKTQQPEPV-NISTNKI--ENPLEEIAILSEGRRLSEEKLFITQQRMQKIEELLEKVCSENP-LDPNKTKQWMKASIKLSDPSKAIKVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATIGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQAPSIFQRHMDEAFR-VFRKFCCVYVDDILVFSNNEE 413
BLAST of CX674999 vs. ExPASy Swiss-Prot
Match: POL_COYMV (Putative polyprotein OS=Commelina yellow mottle virus PE=4 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.875e-13 Identity = 44/121 (36.36%), Postives = 67/121 (55.37%), Query Frame = -2 Query: 5 KKANGKWRMCVDFTGLNKACPKDSFPLPKIDQLVDSTAGHALLSFMDAFSGYNQIPMYEQDEESTAFITNKGLFCYRVMPFGLKNAGATYQRLVNKVFKPLIGKTMEVYVDDMITKSKIRE 367 K+ GK RM ++ LN+ D + LP I+ ++ + S D SG+ Q+ M E+ TAF+ L+ + VMPFGLKNA A +QR ++ VFK K + VY+DD++ S+ E Sbjct: 1457 KEKKGKERMVFNYKLLNENTESDQYSLPGINTIISKVGRSKIYSKFDLKSGFWQVAMEEESVPWTAFLAGNKLYEWLVMPFGLKNAPAIFQRKMDNVFKG-TEKFIAVYIDDILVFSETAE 1576
BLAST of CX674999 vs. ExPASy Swiss-Prot
Match: POL_CAMVN (Enzymatic polyprotein OS=Cauliflower mosaic virus (strain NY8153) GN=ORF V PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.875e-13 Identity = 73/272 (26.84%), Postives = 132/272 (48.53%), Query Frame = -2 Query: 5 KAMETGEAMQITSLDTRVENKNGRQEPVEDLETVSLGPENPGKTIRI---GSRLKGEQKQELVKCLQAHADVFAWTHEDMPGIDPEVACH--KLAIKKG--ARAVRQKRRCFNQERYEAINGEVEKLLRAGFIREVNYPEWISNVVLVKKAN---GKWRMCVDFTGLNKACPKDSFPLPKIDQLVDSTAGHALLSFMDAFSGYNQIPMYEQDEESTAFITNKGLFCYRVMPFGLKNAGATYQRLVNKVFKPLIGKTMEVYVDDMITKSKIRE 790 +A+ G + S+ R +K + EPV ++ T + ENP + I I G RL E+ + +Q ++ + P +DP K +IK ++A++ K ++ E + ++++LL I+ P ++ +A G RM V++ +NKA D++ LP D+L+ G + S D SG+ Q+ + ++ TAF +G + + V+PFGLK A + +QR +++ F+ + K VYVDD++ S E Sbjct: 150 RAVRVGTEGFLESMKKR--SKTQQPEPV-NISTNKI--ENPLEEIAILSEGRRLSEEKLFITQQRMQKTEELLEKVCSENP-LDPNKTKQWMKASIKLSDPSKAIKVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAENGRGNKRMVVNYKAMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQAPSIFQRHMDEAFR-VFRKFCCVYVDDIVVFSNNEE 414
BLAST of CX674999 vs. ExPASy Swiss-Prot
Match: POL_FMVD (Enzymatic polyprotein OS=Figwort mosaic virus (strain DxS) GN=ORF V PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.456e-13 Identity = 51/167 (30.54%), Postives = 88/167 (52.69%), Query Frame = -2 Query: 17 RAVRQKRRCFNQERYEAINGEVEKLLRAGFIREVNYPEWISNVVLVK----KANGKWRMCVDFTGLNKACPKDSFPLPKIDQLVDSTAGHALLSFMDAFSGYNQIPMYEQDEESTAFITNKGLFCYRVMPFGLKNAGATYQRLVNKVFKPLIGKTMEVYVDDMITKS 505 + +R K ++ + E ++++LL G I + + +S LV+ + GK RM V++ +N+A DS LP + +L+ G ++ S D SG+ Q+ + E+ ++ TAF +G F ++V+PFGLK A + +QR + K VYVDD+I S Sbjct: 238 KVIRVKPMSYSPQDREGFAKQIKELLDLGLIIP-SKSQHMSPAFLVENEAERRRGKKRMVVNYKAINQATIGDSHNLPNMQELLTLLRGKSIFSSFDCKSGFWQVVLDEESQKLTAFTCPQGHFQWKVVPFGLKQAPSIFQRHMQTALNG-ADKFCMVYVDDIIVFS 402
BLAST of CX674999 vs. ExPASy Swiss-Prot
Match: POL_CAMVD (Enzymatic polyprotein OS=Cauliflower mosaic virus (strain D/H) GN=ORF V PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 9.307e-13 Identity = 48/171 (28.07%), Postives = 89/171 (52.05%), Query Frame = -2 Query: 5 ARAVRQKRRCFNQERYEAINGEVEKLLRAGFIREVNYPEWISNVVL---VKKANGKWRMCVDFTGLNKACPKDSFPLPKIDQLVDSTAGHALLSFMDAFSGYNQIPMYEQDEESTAFITNKGLFCYRVMPFGLKNAGATYQRLVNKVFKPLIGKTMEVYVDDMITKSKIRE 508 ++A++ K ++ E + ++++LL I+ P ++ +K GK RM V++ +NKA D++ P D+L+ G + S D SG+ Q+ + ++ TAF +G + + V+PFGLK A + +QR +++ F+ + K VYVDD++ S E Sbjct: 239 SKAIKVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYNPPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQAPSIFQRHMDEAFR-VFRKFCCVYVDDILVFSNNEE 408
BLAST of CX674999 vs. ExPASy Swiss-Prot
Match: POL_SOCMV (Enzymatic polyprotein OS=Soybean chlorotic mottle virus GN=ORF V PE=3 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 4.619e-12 Identity = 49/150 (32.67%), Postives = 82/150 (54.67%), Query Frame = -2 Query: 14 EVEKLLRAGFIREVNYPE-----WISNVVLVKKANGKWRMCVDFTGLNKACPKDSFPLPKIDQLVDSTAGHALLSFMDAFSGYNQIPMYEQDEESTAF-ITNKGLFCYRVMPFGLKNAGATYQRLVNKVFKPLIGKTMEVYVDDMITKSK 445 E E LL+ G IRE P ++ N +K+ GK RM +++ +N+A DS+ LP+ D +++ G S +DA SGY Q+ ++E + TAF + + + V+ FGLK A + YQR +++ K L + Y+DD++ +K Sbjct: 222 ECEDLLKKGLIRESQSPHSAPAFYVENHNEIKR--GKRRMVINYKKMNEATIGDSYKLPRKDFILEKIKGSLWFSSLDAKSGYYQLRLHENTKPLTAFSCPPQKHYEWNVLSFGLKQAPSIYQRFMDQSLKGLEHICL-AYIDDILIFTK 368 The following BLAST results are available for this feature:
BLAST of CX674999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674999 ID=CX674999; Name=CX674999; organism=Citrus sinensis; type=EST; length=836bpback to top |