CX674998

Overview
NameCX674998
Unique NameCX674998
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length594
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG_AQUAE (3-oxoacyl-[acyl-carrier-protein] reductase OS=Aquifex aeolicus GN=fabG PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 4.344e-33
Identity = 76/166 (45.78%), Postives = 105/166 (63.25%), Query Frame = -3
Query:   86 WQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGM 583
            W++V+ +NLTG FL TQ  +  ++       K  W                   GRI+NI+SVVG  GN+ Q NYS  KAG+IG TK++AKE A RN+ VN +APGFI +DMTA L E++++K  E+IPLGR+G PEEV  +  FL    A+ YITG+V++++GGM
Sbjct:  109 WEEVLKVNLTGTFLVTQNSLRKMI-------KQRW-------------------GRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIKQKYKEQIPLGRFGSPEEVANVVLFLCSELAS-YITGEVIHVNGGM 247          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG_STAAW (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MW2) GN=fabG PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.677e-32
Identity = 78/169 (46.15%), Postives = 100/169 (59.17%), Query Frame = -3
Query:   80 KWQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 586
            +W DVID NL GVF C Q   P +L                              G IIN++SVVG VGN  QANY A KAGVIGLTK+ A+E ASR I VN +APGFI SDMT  L ++L++++L +IPL R+GQ  ++     FLA + A  YITGQ ++++GGM M
Sbjct:  105 EWDDVIDTNLKGVFNCIQKATPQML--------------------------RQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAK-YITGQTIHVNGGMYM 246          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG_STAAS (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MSSA476) GN=fabG PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.677e-32
Identity = 78/169 (46.15%), Postives = 100/169 (59.17%), Query Frame = -3
Query:   80 KWQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 586
            +W DVID NL GVF C Q   P +L                              G IIN++SVVG VGN  QANY A KAGVIGLTK+ A+E ASR I VN +APGFI SDMT  L ++L++++L +IPL R+GQ  ++     FLA + A  YITGQ ++++GGM M
Sbjct:  105 EWDDVIDTNLKGVFNCIQKATPQML--------------------------RQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAK-YITGQTIHVNGGMYM 246          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG_STAAR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MRSA252) GN=fabG PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.677e-32
Identity = 78/169 (46.15%), Postives = 100/169 (59.17%), Query Frame = -3
Query:   80 KWQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 586
            +W DVID NL GVF C Q   P +L                              G IIN++SVVG VGN  QANY A KAGVIGLTK+ A+E ASR I VN +APGFI SDMT  L ++L++++L +IPL R+GQ  ++     FLA + A  YITGQ ++++GGM M
Sbjct:  105 EWDDVIDTNLKGVFNCIQKATPQML--------------------------RQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAK-YITGQTIHVNGGMYM 246          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG_STAAN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain N315) GN=fabG PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.677e-32
Identity = 78/169 (46.15%), Postives = 100/169 (59.17%), Query Frame = -3
Query:   80 KWQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 586
            +W DVID NL GVF C Q   P +L                              G IIN++SVVG VGN  QANY A KAGVIGLTK+ A+E ASR I VN +APGFI SDMT  L ++L++++L +IPL R+GQ  ++     FLA + A  YITGQ ++++GGM M
Sbjct:  105 EWDDVIDTNLKGVFNCIQKATPQML--------------------------RQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAK-YITGQTIHVNGGMYM 246          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG_STAAM (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=fabG PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.677e-32
Identity = 78/169 (46.15%), Postives = 100/169 (59.17%), Query Frame = -3
Query:   80 KWQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 586
            +W DVID NL GVF C Q   P +L                              G IIN++SVVG VGN  QANY A KAGVIGLTK+ A+E ASR I VN +APGFI SDMT  L ++L++++L +IPL R+GQ  ++     FLA + A  YITGQ ++++GGM M
Sbjct:  105 EWDDVIDTNLKGVFNCIQKATPQML--------------------------RQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAK-YITGQTIHVNGGMYM 246          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG_STAAC (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain COL) GN=fabG PE=3 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 3.677e-32
Identity = 78/169 (46.15%), Postives = 100/169 (59.17%), Query Frame = -3
Query:   80 KWQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 586
            +W DVID NL GVF C Q   P +L                              G IIN++SVVG VGN  QANY A KAGVIGLTK+ A+E ASR I VN +APGFI SDMT  L ++L++++L +IPL R+GQ  ++     FLA + A  YITGQ ++++GGM M
Sbjct:  105 EWDDVIDTNLKGVFNCIQKATPQML--------------------------RQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAK-YITGQTIHVNGGMYM 246          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG_STAES (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=fabG PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.070e-31
Identity = 77/169 (45.56%), Postives = 98/169 (57.99%), Query Frame = -3
Query:   80 KWQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 586
            +W DVID NL GVF C Q   P +L                              G IIN+ S+VG +GN  QANY A KAGVIGLTK  A+E ASR I VN +APGFI SDMT  L +DL+ ++LE+IPL R+G+  ++     FLA + A  YITGQ ++++GGM M
Sbjct:  103 EWDDVIDTNLKGVFNCIQKVTPQML--------------------------RQRSGAIINLTSIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGITVNAVAPGFIVSDMTNALSDDLKDQMLEQIPLKRFGEDTDIANTVAFLASDKAK-YITGQTIHVNGGMYM 244          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG_STAEQ (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=fabG PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.070e-31
Identity = 77/169 (45.56%), Postives = 98/169 (57.99%), Query Frame = -3
Query:   80 KWQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 586
            +W DVID NL GVF C Q   P +L                              G IIN+ S+VG +GN  QANY A KAGVIGLTK  A+E ASR I VN +APGFI SDMT  L +DL+ ++LE+IPL R+G+  ++     FLA + A  YITGQ ++++GGM M
Sbjct:  103 EWDDVIDTNLKGVFNCIQKVTPQML--------------------------RQRSGAIINLTSIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGITVNAVAPGFIVSDMTNALSDDLKDQMLEQIPLKRFGEDTDIANTVAFLASDKAK-YITGQTIHVNGGMYM 244          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG_THEMA (3-oxoacyl-[acyl-carrier-protein] reductase OS=Thermotoga maritima GN=fabG PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.113e-31
Identity = 75/168 (44.64%), Postives = 101/168 (60.12%), Query Frame = -3
Query:   80 WQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 583
            W  VI++NL GVF  TQ+ +P ++                              G I+N++SVVG+ GN  Q NY+A+KAGVIG+TK  AKE A RNI VN +APGFI + MT KL E   +  L +IPLGR+G+PEEV  +  FLA +  + Y+TGQV+ IDGG+V+
Sbjct:  106 WDAVINVNLKGVFNVTQMVVPYMI--------------------------KQRNGSIVNVSSVVGIYGNPGQTNYAASKAGVIGMTKTWAKELAGRNIRVNAVAPGFIETPMTEKLPEKARETALSRIPLGRFGKPEEVAQVILFLA-SDESSYVTGQVIGIDGGLVI 246          
The following BLAST results are available for this feature:
BLAST of CX674998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
FABG_AQUAE4.344e-3345.783-oxoacyl-[acyl-carrier-protein] reductase OS=Aqui... [more]
FABG_STAAW3.677e-3246.153-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAS3.677e-3246.153-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAR3.677e-3246.153-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAN3.677e-3246.153-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAM3.677e-3246.153-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAC3.677e-3246.153-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAES1.070e-3145.563-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAEQ1.070e-3145.563-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_THEMA3.113e-3144.643-oxoacyl-[acyl-carrier-protein] reductase OS=Ther... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_59A04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-59A04-A7-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674998 ID=CX674998; Name=CX674998; organism=Citrus sinensis; type=EST; length=594bp
TTTCAACCCATTCGATCTTACATATGATAGCTACAGGTCAGAACTGAAAC
TAAACCAGGCATAATGGGTCACTGACCTACATAACCATTCCTCCGTCAAT
ATTAAGCACCTGTCCAGTAATGTAACCGGTTGCGGGATTGATGGCCAAGA
ATTCCTCCAGTCCAACAACTTCTTCAGGTTGGCCATACCTTCCTAACGGG
ATTTTCTCCAAGATCTTCTTTTCTAGGTCTTCGCCAAGCTTGGCGGTCAT
ATCAGACGCGATGAATCCTGGTGCAATAGTATTGACATTAATGTTTCTGC
TTGCATATTCCTTTGCAACAGCTTTTGTCAGGCCAATAACACCTGCTTTT
GCAGCACTGTAATTGGCTTGGTCAATATTTCCAACCAGACCAACAACTGA
TGCTATATTGATTATTCTTCCCTTTTTCTTCTTCATCATGATTTTGGCTG
CTGCCTGCAAAGATAAATGGCCTCAGTTCCAATATACTTTAGCATCCATT
AGCATAACTAGTAAGATCATAGGAATGTGCACCTGTGTACACAGGAATAC
ACCTGTAAGATTCAGATCAATAACGTCCTGCCATTTGTGACCCT
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