CX674998

Overview
NameCX674998
Unique NameCX674998
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length594
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG_RICCN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia conorii GN=fabG PE=3 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 2.635e-30
Identity = 66/114 (57.89%), Postives = 88/114 (77.19%), Query Frame = -3
Query:   80 GRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 421
            GRIINI+S+VG+ GN  QANY A+KAG+IG+TK+++ E A+R I VNT+APGFI SDMT KL E   + I++KIPLG YG PE+V     FLA + A+ YITGQ ++++GGM+M
Sbjct:  128 GRIINISSIVGISGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNTVAPGFIKSDMTDKLNEKQREAIVQKIPLGTYGMPEDVAHAVAFLASDQAS-YITGQTIHVNGGMLM 240          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG_RICTY (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia typhi GN=fabG PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 3.442e-30
Identity = 67/114 (58.77%), Postives = 87/114 (76.32%), Query Frame = -3
Query:   80 GRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 421
            GRIINI+S+VG+ GN  QANY A+KAG+IG+TK+++ E A+R I VN +APGFI SDMT KL E   + I++KIPLG YG PE+V     FLA N A+ YITGQ L+++GGM+M
Sbjct:  128 GRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNHAS-YITGQTLHVNGGMLM 240          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG_RICPR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia prowazekii GN=fabG PE=1 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 3.442e-30
Identity = 67/114 (58.77%), Postives = 87/114 (76.32%), Query Frame = -3
Query:   80 GRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 421
            GRIINI+S+VG+ GN  QANY A+KAG+IG+TK+++ E A+R I VN +APGFI SDMT KL E   + I++KIPLG YG PE+V     FLA N A+ YITGQ L+++GGM+M
Sbjct:  128 GRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNAS-YITGQTLHVNGGMLM 240          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG_RICFE (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia felis GN=fabG PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 5.871e-30
Identity = 65/114 (57.02%), Postives = 87/114 (76.32%), Query Frame = -3
Query:   80 GRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 421
            GRIINI+S+VG+ GN  QANY A+KAG+IG+TK+++ E A+R I VN +APGFI SDMT KL E   + I++KIPLG YG PE+V     FLA + A+ YITGQ ++++GGM+M
Sbjct:  128 GRIINISSIVGISGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQKIPLGTYGMPEDVANAVAFLASDQAS-YITGQTIHVNGGMLM 240          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG_VIBCH (3-oxoacyl-[acyl-carrier-protein] reductase OS=Vibrio cholerae GN=fabG PE=3 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 1.308e-29
Identity = 70/169 (41.42%), Postives = 99/169 (58.58%), Query Frame = -3
Query:   80 KWQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 586
            +W D+++ NLT +F  ++     +L  M+   +                      GRIIN+ SVVG +GN  QANY+AAKAGVIG TK++A+E ASR + VNT+APGFI +DMT  L ++     L ++P GR G P E+     FLA +P   YITG+ L+++GGM M
Sbjct:  102 EWSDIMETNLTSIFRLSKA----VLRGMMKKRQ----------------------GRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGDPREIASAVAFLA-SPEAAYITGETLHVNGGMYM 243          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG_CHLMU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia muridarum GN=fabG PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 3.806e-29
Identity = 74/168 (44.05%), Postives = 101/168 (60.12%), Query Frame = -3
Query:   86 KWQDVIDLNLTGVF-LCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGM 586
            +W  VID NL  ++ +C+ V  PMI                               G I+NI+S+VGL G+  Q NY+AAKAG+IG +KA++KE  S+NI VN IAPGFI +DMT  L ++L+ + L+ +PLGR G PEE+     FLA N ++ YITGQVL++DGGM
Sbjct:  108 EWSSVIDTNLGSIYNVCSAVIRPMI---------------------------KARSGAIVNISSIVGLRGSPGQTNYAAAKAGIIGFSKALSKEVGSKNIRVNCIAPGFIDTDMTKGLSDNLKNEWLKGVPLGRVGTPEEIAMAALFLASNQSS-YITGQVLSVDGGM 247          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG_VIBHA (3-oxoacyl-[acyl-carrier-protein] reductase OS=Vibrio harveyi GN=fabG PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 4.970e-29
Identity = 70/169 (41.42%), Postives = 97/169 (57.40%), Query Frame = -3
Query:   80 KWQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 586
            +W D+I+ NLT ++  ++      +L  +M  +                      GRIIN+ SVVG +GN  Q NY+AAKAGVIG TK++A+E ASR + VNT+APGFI +DMT  L +D     L  +P GR G P E+     FLA +P   YITG+ L+++GGM M
Sbjct:  102 EWNDIINTNLTPIYRMSKA-----VLRGMMKKRA---------------------GRIINVGSVVGTMGNAGQTNYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDDQRAATLSNVPAGRLGDPREIASAVVFLA-SPEAAYITGETLHVNGGMYM 243          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG_RICBR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia bellii (strain RML369-C) GN=fabG PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 8.478e-29
Identity = 63/114 (55.26%), Postives = 84/114 (73.68%), Query Frame = -3
Query:   80 GRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 421
            GRIINI S+VG+ GN  QANY A+KAG+IG+TK++A E A+R I VN +APGFI SDMT KL ++ ++ I  KIP G YG PE++     FLA +  + YITGQ L+++GGM+M
Sbjct:  128 GRIINITSIVGVSGNPGQANYCASKAGLIGMTKSLAYEVATRGITVNAVAPGFIKSDMTDKLNDEQKEAITRKIPKGTYGMPEDIANAVAFLA-SKQSSYITGQTLHVNGGMLM 240          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG_CHLTR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia trachomatis GN=fabG PE=1 SV=3)

HSP 1 Score: 126.331 bits (316), Expect = 1.107e-28
Identity = 73/168 (43.45%), Postives = 100/168 (59.52%), Query Frame = -3
Query:   86 KWQDVIDLNLTGVF-LCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGM 586
            +W  VI+ NL  ++ +C+ V  PMI                               G IINI+S+VGL G+  Q NY+AAKAG+IG +KA++KE  S+NI VN IAPGFI +DMT  L ++L+ + L+ +PLGR G PEE+     FLA +  + YITGQVL++DGGM
Sbjct:  108 EWSSVINTNLGSIYNVCSAVIRPMI---------------------------KARSGAIINISSIVGLRGSPGQTNYAAAKAGIIGFSKALSKEVGSKNIRVNCIAPGFIDTDMTKSLNDNLKNEWLKGVPLGRVGMPEEIAKAALFLA-SDGSSYITGQVLSVDGGM 247          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG_SALTY (3-oxoacyl-[acyl-carrier-protein] reductase OS=Salmonella typhimurium GN=fabG PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.562e-27
Identity = 69/169 (40.83%), Postives = 98/169 (57.99%), Query Frame = -3
Query:   80 KWQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 586
            +W D+I+ NL+ VF  ++     ++  M+                          GRII I SVVG +GN  QANY+AAKAG+IG +K++A+E ASR I VN +APGFI +DMT  L +D    IL ++P GR G  +E+     FLA + A+ YITG+ L+++GGM M
Sbjct:  102 EWNDIIETNLSSVFRLSKA----VMRAMMKKR----------------------CGRIITIGSVVGTMGNAGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEAS-YITGETLHVNGGMYM 243          
The following BLAST results are available for this feature:
BLAST of CX674998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
FABG_RICCN2.635e-3057.893-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
FABG_RICTY3.442e-3058.773-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
FABG_RICPR3.442e-3058.773-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
FABG_RICFE5.871e-3057.023-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
FABG_VIBCH1.308e-2941.423-oxoacyl-[acyl-carrier-protein] reductase OS=Vibr... [more]
FABG_CHLMU3.806e-2944.053-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]
FABG_VIBHA4.970e-2941.423-oxoacyl-[acyl-carrier-protein] reductase OS=Vibr... [more]
FABG_RICBR8.478e-2955.263-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
FABG_CHLTR1.107e-2843.453-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]
FABG_SALTY3.562e-2740.833-oxoacyl-[acyl-carrier-protein] reductase OS=Salm... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_59A04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-59A04-A7-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674998 ID=CX674998; Name=CX674998; organism=Citrus sinensis; type=EST; length=594bp
TTTCAACCCATTCGATCTTACATATGATAGCTACAGGTCAGAACTGAAAC
TAAACCAGGCATAATGGGTCACTGACCTACATAACCATTCCTCCGTCAAT
ATTAAGCACCTGTCCAGTAATGTAACCGGTTGCGGGATTGATGGCCAAGA
ATTCCTCCAGTCCAACAACTTCTTCAGGTTGGCCATACCTTCCTAACGGG
ATTTTCTCCAAGATCTTCTTTTCTAGGTCTTCGCCAAGCTTGGCGGTCAT
ATCAGACGCGATGAATCCTGGTGCAATAGTATTGACATTAATGTTTCTGC
TTGCATATTCCTTTGCAACAGCTTTTGTCAGGCCAATAACACCTGCTTTT
GCAGCACTGTAATTGGCTTGGTCAATATTTCCAACCAGACCAACAACTGA
TGCTATATTGATTATTCTTCCCTTTTTCTTCTTCATCATGATTTTGGCTG
CTGCCTGCAAAGATAAATGGCCTCAGTTCCAATATACTTTAGCATCCATT
AGCATAACTAGTAAGATCATAGGAATGTGCACCTGTGTACACAGGAATAC
ACCTGTAAGATTCAGATCAATAACGTCCTGCCATTTGTGACCCT
back to top