CX674998

Overview
NameCX674998
Unique NameCX674998
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length594
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG_SALTI (3-oxoacyl-[acyl-carrier-protein] reductase OS=Salmonella typhi GN=fabG PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.562e-27
Identity = 69/169 (40.83%), Postives = 98/169 (57.99%), Query Frame = -3
Query:   80 KWQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 586
            +W D+I+ NL+ VF  ++     ++  M+                          GRII I SVVG +GN  QANY+AAKAG+IG +K++A+E ASR I VN +APGFI +DMT  L +D    IL ++P GR G  +E+     FLA + A+ YITG+ L+++GGM M
Sbjct:  102 EWNDIIETNLSSVFRLSKA----VMRAMMKKR----------------------CGRIITIGSVVGTMGNAGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIASAVAFLASDEAS-YITGETLHVNGGMYM 243          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG_SHIFL (3-oxoacyl-[acyl-carrier-protein] reductase OS=Shigella flexneri GN=fabG PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.036e-26
Identity = 69/169 (40.83%), Postives = 97/169 (57.40%), Query Frame = -3
Query:   80 KWQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 586
            +W D+I+ NL+ VF  ++     ++  M+                          GRII I SVVG +GN  QANY+AAKAG+IG +K++A+E ASR I VN +APGFI +DMT  L +D    IL ++P GR G  +E+     FLA + A  YITG+ L+++GGM M
Sbjct:  102 EWNDIIETNLSSVFRLSKA----VMRAMMKKRH----------------------GRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEA-AYITGETLHVNGGMYM 243          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG_ECOLI (3-oxoacyl-[acyl-carrier-protein] reductase OS=Escherichia coli (strain K12) GN=fabG PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.036e-26
Identity = 69/169 (40.83%), Postives = 97/169 (57.40%), Query Frame = -3
Query:   80 KWQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 586
            +W D+I+ NL+ VF  ++     ++  M+                          GRII I SVVG +GN  QANY+AAKAG+IG +K++A+E ASR I VN +APGFI +DMT  L +D    IL ++P GR G  +E+     FLA + A  YITG+ L+++GGM M
Sbjct:  102 EWNDIIETNLSSVFRLSKA----VMRAMMKKRH----------------------GRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEA-AYITGETLHVNGGMYM 243          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG_HAEIN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Haemophilus influenzae GN=fabG PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.768e-26
Identity = 68/169 (40.24%), Postives = 97/169 (57.40%), Query Frame = -3
Query:   80 KWQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 586
            +W D++  NLT V+     H+   +L  +M  +                      GRIINI SVVG  GN  Q NY AAKAGV+G +K++AKE A+R I VN +APGFIA+DMT  L ++ +  IL  +P GR G+ +++     FLA + A GYITG  L+++GG+ +
Sbjct:  100 EWFDIMQTNLTSVY-----HLSKAMLRSMMKKRF---------------------GRIINIGSVVGSTGNPGQTNYCAAKAGVVGFSKSLAKEVAARGITVNVVAPGFIATDMTEVLTDEQKAGILSNVPAGRLGEAKDIAKAVAFLASDDA-GYITGTTLHVNGGLYL 241          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: NODG_AZOBR (Nodulation protein G OS=Azospirillum brasilense GN=nodG PE=3 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 3.938e-26
Identity = 68/167 (40.72%), Postives = 95/167 (56.89%), Query Frame = -3
Query:   86 KWQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGM 586
            +W  VI  NL+ +F  TQ   P +       A+  W                   GRIINI+SV G+ G   Q NYSAAKAGVIG TKA+A E A++ + VN IAPG+I +DM   + ED+ + I + +P+ R G+P+E+ G   +LA +   GY+TG  LNI+GG+
Sbjct:  104 QWDAVIATNLSSLFNVTQQVSPKM-------AERGW-------------------GRIINISSVNGVKGQAGQTNYSAAKAGVIGFTKALAAELATKGVTVNAIAPGYIGTDMVMAIREDIRQAITDSVPMKRLGRPDEIGGAVSYLA-SEIAGYVTGSTLNINGGL 243          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG_CHLPN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia pneumoniae GN=fabG PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 6.717e-26
Identity = 69/167 (41.32%), Postives = 96/167 (57.49%), Query Frame = -3
Query:   86 WQDVIDLNLTGVFL-CTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGM 583
            WQ VI  NLT ++  C+ V   MI                               G IIN+AS+V  +G+  Q NY+AAKAG+I  TK++AKE A+RNI VN +APGFI +DMT+ L ++L+ + L+ IPLGR G PE+V  +  FLA +  + Y+T Q L +DGG+
Sbjct:  108 WQSVISTNLTSLYYTCSSVIRHMI---------------------------KARSGSIINVASIVAKIGSAGQTNYAAAKAGIIAFTKSLAKEVAARNIRVNCLAPGFIETDMTSVLNDNLKAEWLKSIPLGRAGTPEDVARVALFLA-SQLSSYMTAQTLVVDGGL 246          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG_PSEAE (3-oxoacyl-[acyl-carrier-protein] reductase OS=Pseudomonas aeruginosa GN=fabG PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.496e-25
Identity = 61/114 (53.51%), Postives = 80/114 (70.18%), Query Frame = -3
Query:   80 GRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 421
            GRIINI SVVG +GN  Q NY+AAKAG+ G T+A+A+E  SR I VN +APGFI +DMT +L E   + +L +IPLGR GQ EE+  +  FLA + A  Y+TG  + ++GGM M
Sbjct:  134 GRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPGFIDTDMTRELPEAQREALLGQIPLGRLGQAEEIAKVVGFLASDGA-AYVTGATVPVNGGMYM 246          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: DHB8_RAT (Estradiol 17-beta-dehydrogenase 8 OS=Rattus norvegicus GN=Hsd17b8 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.334e-25
Identity = 66/168 (39.29%), Postives = 91/168 (54.17%), Query Frame = -3
Query:   80 WQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 583
            W  VI +NL G FL TQ     ++                             +G IINI+S+VG VGNI Q NY+++KAGVIGLT+  A+E     I  N++ PGFIA+ MT K+ E ++ K+   IPLG  G PE+V  +  FLA +  +GYITG  + + GG+ M
Sbjct:  118 WDRVIAVNLKGTFLVTQAAAQALV-------------------------SSGGRGSIINISSIVGKVGNIGQTNYASSKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKMPEKVKDKVTAMIPLGHMGDPEDVADVVAFLA-SEDSGYITGASVEVSGGLFM 259          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: DHB8_HUMAN (Estradiol 17-beta-dehydrogenase 8 OS=Homo sapiens GN=HSD17B8 PE=1 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 3.334e-25
Identity = 66/168 (39.29%), Postives = 91/168 (54.17%), Query Frame = -3
Query:   80 WQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 583
            W  VI +NL G FL TQ     ++                             +G IINI+S+VG VGN+ Q NY+A+KAGVIGLT+  A+E     I  N++ PGFIA+ MT K+ + +  KI E IP+G  G PE+V  +  FLA +  +GYITG  + + GG+ M
Sbjct:  120 WDKVIAVNLKGTFLVTQAAAQALV-------------------------SNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIPMGHLGDPEDVADVVAFLA-SEDSGYITGTSVEVTGGLFM 261          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: DHB8_MOUSE (Estradiol 17-beta-dehydrogenase 8 OS=Mus musculus GN=Hsd17b8 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.354e-25
Identity = 65/168 (38.69%), Postives = 91/168 (54.17%), Query Frame = -3
Query:   80 WQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 583
            W  VI +NL G FL TQ     ++                             +G IINI+S++G VGNI Q NY+++KAGVIGLT+  A+E     I  N++ PGFIA+ MT K+ E ++ K+   IPLG  G PE+V  +  FLA +  +GYITG  + + GG+ M
Sbjct:  119 WDRVIAVNLKGTFLVTQAAAQALV-------------------------SSGGRGSIINISSIIGKVGNIGQTNYASSKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKMPEKVKDKVTAMIPLGHMGDPEDVADVVAFLA-SEDSGYITGASVEVSGGLFM 260          
The following BLAST results are available for this feature:
BLAST of CX674998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
FABG_SALTI3.562e-2740.833-oxoacyl-[acyl-carrier-protein] reductase OS=Salm... [more]
FABG_SHIFL1.036e-2640.833-oxoacyl-[acyl-carrier-protein] reductase OS=Shig... [more]
FABG_ECOLI1.036e-2640.833-oxoacyl-[acyl-carrier-protein] reductase OS=Esch... [more]
FABG_HAEIN1.768e-2640.243-oxoacyl-[acyl-carrier-protein] reductase OS=Haem... [more]
NODG_AZOBR3.938e-2640.72Nodulation protein G OS=Azospirillum brasilense GN... [more]
FABG_CHLPN6.717e-2641.323-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]
FABG_PSEAE1.496e-2553.513-oxoacyl-[acyl-carrier-protein] reductase OS=Pseu... [more]
DHB8_RAT3.334e-2539.29Estradiol 17-beta-dehydrogenase 8 OS=Rattus norveg... [more]
DHB8_HUMAN3.334e-2539.29Estradiol 17-beta-dehydrogenase 8 OS=Homo sapiens ... [more]
DHB8_MOUSE4.354e-2538.69Estradiol 17-beta-dehydrogenase 8 OS=Mus musculus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_59A04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-59A04-A7-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674998 ID=CX674998; Name=CX674998; organism=Citrus sinensis; type=EST; length=594bp
TTTCAACCCATTCGATCTTACATATGATAGCTACAGGTCAGAACTGAAAC
TAAACCAGGCATAATGGGTCACTGACCTACATAACCATTCCTCCGTCAAT
ATTAAGCACCTGTCCAGTAATGTAACCGGTTGCGGGATTGATGGCCAAGA
ATTCCTCCAGTCCAACAACTTCTTCAGGTTGGCCATACCTTCCTAACGGG
ATTTTCTCCAAGATCTTCTTTTCTAGGTCTTCGCCAAGCTTGGCGGTCAT
ATCAGACGCGATGAATCCTGGTGCAATAGTATTGACATTAATGTTTCTGC
TTGCATATTCCTTTGCAACAGCTTTTGTCAGGCCAATAACACCTGCTTTT
GCAGCACTGTAATTGGCTTGGTCAATATTTCCAACCAGACCAACAACTGA
TGCTATATTGATTATTCTTCCCTTTTTCTTCTTCATCATGATTTTGGCTG
CTGCCTGCAAAGATAAATGGCCTCAGTTCCAATATACTTTAGCATCCATT
AGCATAACTAGTAAGATCATAGGAATGTGCACCTGTGTACACAGGAATAC
ACCTGTAAGATTCAGATCAATAACGTCCTGCCATTTGTGACCCT
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