CX674998

Overview
NameCX674998
Unique NameCX674998
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length594
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: KDUD_DICD3 (2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=Dickeya dadantii (strain 3937) GN=kduD PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.004e-21
Identity = 61/167 (36.53%), Postives = 95/167 (56.89%), Query Frame = -3
Query:   89 WQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMT--AKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGG 583
            W DV++LN+  VF  +Q             A+ +   GH               G+IINIAS++   G I   +Y+A+K  V+G+T+ VA E+A  NINVN IAPG++A++ T   +  +D  K+IL++IP GR+G P+++ G   FLA + A+ Y+ G  + +DGG
Sbjct:  109 WDDVMNLNIKSVFFMSQTV-----------ARQFIKQGH--------------GGKIINIASMLSFQGGIPVPSYTASKKRVMGITRIVANEWAKHNINVNAIAPGYMATNNTQHVRADQDRSKEILDRIPAGRWGLPQDLQGPAVFLA-SSASDYVNGYTIAVDGG 249          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG_MYCTU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Mycobacterium tuberculosis GN=fabG PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.311e-21
Identity = 54/114 (47.37%), Postives = 77/114 (67.54%), Query Frame = -3
Query:   80 GRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 421
            GR+I I SV G  G  +QANY+A+KAGVIG+ +++A+E +  N+  N +APG+I +DMT  L E +++  L+ IP  R G P EV G+  FLA   A+ YI+G V+ +DGGM M
Sbjct:  133 GRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDAS-YISGAVIPVDGGMGM 245          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG_MYCBO (3-oxoacyl-[acyl-carrier-protein] reductase OS=Mycobacterium bovis GN=fabG PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.311e-21
Identity = 54/114 (47.37%), Postives = 77/114 (67.54%), Query Frame = -3
Query:   80 GRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 421
            GR+I I SV G  G  +QANY+A+KAGVIG+ +++A+E +  N+  N +APG+I +DMT  L E +++  L+ IP  R G P EV G+  FLA   A+ YI+G V+ +DGGM M
Sbjct:  133 GRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDAS-YISGAVIPVDGGMGM 245          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: CBR4_HUMAN (Carbonyl reductase family member 4 OS=Homo sapiens GN=CBR4 PE=1 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 1.311e-21
Identity = 55/112 (49.11%), Postives = 75/112 (66.96%), Query Frame = -3
Query:   86 GRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGM 421
            G I+N+ S+VGL GN  Q+ YSA+K G++G ++A+AKE A + I VN +APGF+ +DMT  L E+  KK    IPLGR+G+  EV     FL  +P   YITG VL +DGG+
Sbjct:  128 GSIVNVGSIVGLKGNSGQSVYSASKGGLVGFSRALAKEVARKKIRVNVVAPGFVHTDMTKDLKEEHLKK---NIPLGRFGETIEVAHAVVFLLESP---YITGHVLVVDGGL 233          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG_MYCS2 (3-oxoacyl-[acyl-carrier-protein] reductase OS=Mycobacterium smegmatis GN=fabG PE=3 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 2.236e-21
Identity = 64/169 (37.87%), Postives = 91/169 (53.85%), Query Frame = -3
Query:   80 KWQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 586
            ++++VI+ NLTG F C Q           M  K +                    GRII I SV G+ G  +QANY+AAKAG+IG+ +++++E A   +  N +APG+I ++MT  L E ++   L+ IP  R G  EEV G   FLA   A+ YI G V+ +DGGM M
Sbjct:  112 RFEEVINTNLTGAFRCAQ------RASRTMQRKRF--------------------GRIIFIGSVSGMWGIGNQANYAAAKAGLIGMARSISRELAKAGVTANVVAPGYIDTEMTRALDERIQAGALDFIPAKRVGTAEEVAGAVSFLASEDAS-YIAGAVIPVDGGMGM 253          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: NOG4_RHIME (Nodulation protein G OS=Rhizobium meliloti GN=nodG PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.814e-21
Identity = 54/114 (47.37%), Postives = 75/114 (65.79%), Query Frame = -3
Query:   80 GRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 421
            GRIIN+ SV G +GN  Q NY A+KAG+IG +K+  +  ++RNI VN +APGFI S MT KL    ++KI+  IP+ R G   EV     +LA + A  Y+TGQ ++++GGM M
Sbjct:  132 GRIINVTSVAGAIGNPGQTNYCASKAGMIGFSKSWRRR-STRNITVNCVAPGFIESAMTDKLNHKQKEKIMVAIPIHRMGTGTEVASAVAYLASDHA-AYVTGQTIHVNGGMAM 243          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: KDUD_ECOLI (2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=Escherichia coli (strain K12) GN=kduD PE=3 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 3.814e-21
Identity = 61/167 (36.53%), Postives = 98/167 (58.68%), Query Frame = -3
Query:   89 WQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEK--KILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGG 583
            W DV++LN+  VF  +Q             AK +   G+               G+IINIAS++   G I   +Y+A+K+GV+G+T+ +A E+A  NINVN IAPG++A++ T +L  D ++  +IL++IP GR+G P +++G   FLA + A+ Y+ G  + +DGG
Sbjct:  109 WDDVMNLNIKSVFFMSQAA-----------AKHFIAQGN--------------GGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPIVFLA-SSASDYVNGYTIAVDGG 249          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG_BUCBP (3-oxoacyl-[acyl-carrier-protein] reductase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=fabG PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 8.498e-21
Identity = 54/114 (47.37%), Postives = 72/114 (63.16%), Query Frame = -3
Query:   80 GRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 421
            G+II I SV+  +GN  Q NYSAAK G++G  K++A E A + I VN IAPG I + MT  L +    K L KIP+ R G  +E+  +  FL  N A  YITGQV++++GGM M
Sbjct:  132 GKIITIGSVIAHIGNCGQTNYSAAKLGLVGFHKSLALELAPKGITVNMIAPGLIKTGMTNNLSQKQLSKYLSKIPMKRLGTIKEISKITLFLISNDA-NYITGQVIHVNGGMYM 244          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: PHBB_RALEH (Acetoacetyl-CoA reductase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=phbB PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.893e-20
Identity = 61/168 (36.31%), Postives = 92/168 (54.76%), Query Frame = -3
Query:   80 WQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 583
            W  VID NLT +F  T+  I  +       A   W                   GRI+NI+SV G  G   Q NYS AKAG+ G T A+A+E A++ + VNT++PG+IA+DM   + +D+  KI+  IP+ R G PEE+  +  +L+ +  +G+ TG   +++GG+ M
Sbjct:  105 WDAVIDTNLTSLFNVTKQVIDGM-------ADRGW-------------------GRIVNISSVNGQKGQFGQTNYSTAKAGLHGFTMALAQEVATKGVTVNTVSPGYIATDMVKAIRQDVLDKIVATIPVKRLGLPEEIASICAWLS-SEESGFSTGADFSLNGGLHM 245          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG_MYCAV (3-oxoacyl-[acyl-carrier-protein] reductase OS=Mycobacterium avium GN=fabG PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 9.395e-20
Identity = 63/169 (37.28%), Postives = 89/169 (52.66%), Query Frame = -3
Query:   80 KWQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 586
            ++ +VI+ NLTG F  TQ           M  K +                    GRII I SV G+ G  +QANY+AAKAG+IG+ +++++E +   +  N +APG+I ++MT  L E ++   LE IP  R G   EV G   FLA   A+ YI G V+ +DGGM M
Sbjct:  112 RFTEVINANLTGAFRVTQ------RAARSMQKKRF--------------------GRIIYIGSVSGMWGIGNQANYAAAKAGLIGMARSISRELSKAGVTANVVAPGYIDTEMTRALDERIQAGALEFIPAKRVGTAAEVPGAVSFLASEDAS-YIAGAVIPVDGGMGM 253          
The following BLAST results are available for this feature:
BLAST of CX674998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
KDUD_DICD31.004e-2136.532-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=D... [more]
FABG_MYCTU1.311e-2147.373-oxoacyl-[acyl-carrier-protein] reductase OS=Myco... [more]
FABG_MYCBO1.311e-2147.373-oxoacyl-[acyl-carrier-protein] reductase OS=Myco... [more]
CBR4_HUMAN1.311e-2149.11Carbonyl reductase family member 4 OS=Homo sapiens... [more]
FABG_MYCS22.236e-2137.873-oxoacyl-[acyl-carrier-protein] reductase OS=Myco... [more]
NOG4_RHIME3.814e-2147.37Nodulation protein G OS=Rhizobium meliloti GN=nodG... [more]
KDUD_ECOLI3.814e-2136.532-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=E... [more]
FABG_BUCBP8.498e-2147.373-oxoacyl-[acyl-carrier-protein] reductase OS=Buch... [more]
PHBB_RALEH1.893e-2036.31Acetoacetyl-CoA reductase OS=Ralstonia eutropha (s... [more]
FABG_MYCAV9.395e-2037.283-oxoacyl-[acyl-carrier-protein] reductase OS=Myco... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_59A04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-59A04-A7-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674998 ID=CX674998; Name=CX674998; organism=Citrus sinensis; type=EST; length=594bp
TTTCAACCCATTCGATCTTACATATGATAGCTACAGGTCAGAACTGAAAC
TAAACCAGGCATAATGGGTCACTGACCTACATAACCATTCCTCCGTCAAT
ATTAAGCACCTGTCCAGTAATGTAACCGGTTGCGGGATTGATGGCCAAGA
ATTCCTCCAGTCCAACAACTTCTTCAGGTTGGCCATACCTTCCTAACGGG
ATTTTCTCCAAGATCTTCTTTTCTAGGTCTTCGCCAAGCTTGGCGGTCAT
ATCAGACGCGATGAATCCTGGTGCAATAGTATTGACATTAATGTTTCTGC
TTGCATATTCCTTTGCAACAGCTTTTGTCAGGCCAATAACACCTGCTTTT
GCAGCACTGTAATTGGCTTGGTCAATATTTCCAACCAGACCAACAACTGA
TGCTATATTGATTATTCTTCCCTTTTTCTTCTTCATCATGATTTTGGCTG
CTGCCTGCAAAGATAAATGGCCTCAGTTCCAATATACTTTAGCATCCATT
AGCATAACTAGTAAGATCATAGGAATGTGCACCTGTGTACACAGGAATAC
ACCTGTAAGATTCAGATCAATAACGTCCTGCCATTTGTGACCCT
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