CX674998

Overview
NameCX674998
Unique NameCX674998
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length594
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG_AGGAC (3-oxoacyl-[acyl-carrier-protein] reductase OS=Aggregatibacter actinomycetemcomitans GN=fabG PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.227e-19
Identity = 55/113 (48.67%), Postives = 73/113 (64.60%), Query Frame = -3
Query:   86 GRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLE-KKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGM 421
            GRI+ I SV GL+GN  Q NYSA+KAG+IG  KA+A E A R I VN +APG I +D+   L E++   +IL+ IP GR G PEEV     FL +     Y+T QV+ ++GG+
Sbjct:  133 GRIVCITSVSGLIGNRGQVNYSASKAGIIGAAKALAVELAKRKITVNCVAPGLIDTDI---LDENVPIDEILKMIPAGRMGDPEEVAHAVNFL-MGEKAAYVTRQVIAVNGGL 241          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: KDUD_BACSU (2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=Bacillus subtilis GN=kduD PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.663e-19
Identity = 60/167 (35.93%), Postives = 93/167 (55.69%), Query Frame = -3
Query:   89 WQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKK--ILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGG 583
            WQ V+++NL  +F+ TQ+    +L             GH               G+IINIAS++   G I    Y+A+K  V GLTK+ A E+A+  I VN IAPG+I++  T  + +D ++   IL++IP GR+GQ +++ G   FLA + A+ Y+ G +L +DGG
Sbjct:  111 WQHVLNVNLNSLFILTQLAGRHML-----------KRGH---------------GKIINIASLLSFQGGILVPAYTASKHAVAGLTKSFANEWAASGIQVNAIAPGYISTANTKPIRDDEKRNEDILKRIPAGRWGQADDIGGTAVFLA-SRASDYVNGHILAVDGG 250          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: DHKR_STRCM (Monensin polyketide synthase putative ketoacyl reductase OS=Streptomyces cinnamonensis PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 7.953e-19
Identity = 65/177 (36.72%), Postives = 85/177 (48.02%), Query Frame = -3
Query:   86 WQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKL-----------GEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGM 583
            W DVID NL  VF  T+     +L    M  +                     +GRIIN+AS  G  G +  A YSA+K GV+G TKA+  E A   I VN + PG++ + M  ++            E +  K   KIPLGRY  PEEV GL  +LA + A   IT Q LN+ GG+
Sbjct:  107 WDDVIDTNLNSVFRMTRA----VLTTGGMRTR--------------------ERGRIINVASTAGKQGVVLGAPYSASKHGVVGFTKALGNELAPTGITVNAVCPGYVETPMAQRVRQGYAAAYDTTEEAILTKFQAKIPLGRYSTPEEVAGLIGYLASDTAAS-ITSQALNVCGGL 258          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: PHAB_PARDE (Acetoacetyl-CoA reductase OS=Paracoccus denitrificans GN=phaB PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.039e-18
Identity = 61/167 (36.53%), Postives = 84/167 (50.30%), Query Frame = -3
Query:   89 KWQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGED-LEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGG 586
            +W++VID NLTG+F  T                  W+                  GRI+NI+S+ G  G   QANYSAAKAG +G TKA+A+E A   I VN I PG+I ++M   + E  L + I+ +IP+  + +PEE+     FLA   A G+ITG       G
Sbjct:   98 QWKEVIDTNLTGLFNMTHP---------------VWS-----------GMRDRKYGRIVNISSINGQKGQAGQANYSAAKAGDLGFTKALAQEGARAGITVNAICPGYIGTEMVRAIDEKVLNEGIIPQIPVAAWAEPEEIARCVVFLASEDA-GFITGSTHQAPNG 237          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: ACT3_STRCO (Putative ketoacyl reductase OS=Streptomyces coelicolor GN=actIII PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.314e-18
Identity = 62/177 (35.03%), Postives = 85/177 (48.02%), Query Frame = -3
Query:   86 WQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKL-----------GEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGM 583
            W DV++ NLTGVF  T+              +V    G L              GRI+NIAS  G  G +  A YSA+K GV+G TKA+  E A   I VN + PGF+ + M A +            E+   +I  ++P+GRY QP EV  +  +L I P    +T Q LN+ GG+
Sbjct:  107 WLDVVETNLTGVFRVTK--------------QVLKAGGMLE----------RGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYL-IGPGAAAVTAQALNVCGGL 258          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: YXBG_BACSU (Uncharacterized oxidoreductase yxbG OS=Bacillus subtilis GN=yxbG PE=3 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 1.500e-17
Identity = 56/172 (32.56%), Postives = 92/172 (53.49%), Query Frame = -3
Query:   83 VIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKI--------PLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMV 574
            +I ++L G FLC++  IP++L                              G IIN +S+ G   ++D++ Y+AAK G+  LTKA+A +YA   I VN+I+PG I + +  KL    E+++ E+         PLGR GQP+E+  +  FLA + ++ Y+TG+ +  DGG++
Sbjct:  111 IIAVDLRGTFLCSKYLIPLML---------------------------ENGGSIINTSSMSGRAADLDRSGYNAAKGGITNLTKAMAIDYARNGIRVNSISPGTIETPLIDKLAGTKEQEMGEQFREANKWITPLGRLGQPKEMATVALFLASDDSS-YVTGEDITADGGIM 254          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: DHK1_STRVN (Granaticin polyketide synthase putative ketoacyl reductase 1 OS=Streptomyces violaceoruber GN=gra-orf5 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.500e-17
Identity = 63/177 (35.59%), Postives = 86/177 (48.59%), Query Frame = -3
Query:   86 WQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKL-----------GEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGM 583
            W DVI  NLT VFL T+     +L    M AK                     +GRIINIAS  G  G +    YSA+K GV+GLTKA+  E A   I VN + PGF+ + M  ++            E+   +I  ++PLGRY +  EV  + E+L  + A   +T Q LN+ GG+
Sbjct:  118 WLDVITTNLTSVFLMTKE----VLNAGGMLAK--------------------KRGRIINIASTGGKQGVVHAVPYSASKHGVVGLTKALGLELARTGITVNAVCPGFVETPMAERVREHYAGIWQVSEEETFDRITNRVPLGRYVETREVAAMVEYLVADDAAA-VTAQALNVCGGL 269          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: Y4VI_RHISN (Uncharacterized short-chain type dehydrogenase/reductase y4vI OS=Rhizobium sp. (strain NGR234) GN=NGR_a01150 PE=3 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 1.959e-17
Identity = 48/112 (42.86%), Postives = 73/112 (65.18%), Query Frame = -3
Query:   89 IINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKL---GEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGG 415
            I+N+AS+ GL+GN  ++ Y+A+KAG+I +TK++A  +ASR I V  +APG + + M A+L   G+     I  ++PLGR  +P+E+     FLA   A+ YITG  L +DGG
Sbjct:  136 IVNVASLAGLLGNPKRSAYAASKAGLISITKSLACRWASRGIRVTAVAPGHVRTPMVAELERAGKLDVSAIRRRVPLGRIARPDEIARAVRFLASAQAS-YITGSTLVVDGG 246          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: HCDS_XANP2 (2-(S)-hydroxypropyl-CoM dehydrogenase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=xecE PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.959e-17
Identity = 58/172 (33.72%), Postives = 86/172 (50.00%), Query Frame = -3
Query:   86 WQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIA-SDMTAKL-----GEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGM 583
            W  ++ +N+TG FL ++      L  ML   +                      G I+N  SV GLVG    A Y AAK  V+ LT+ +A +Y+ R I VN + PG +A +DM  +L       +LE + L K P+GR+G PE++     FL ++    ++TG VL +DGGM
Sbjct:  102 WSRIMAVNVTGTFLASKA----ALFGMLERGR----------------------GAIVNFGSVAGLVGIPTMAAYCAAKGAVVNLTRQMAADYSGRGIRVNVVCPGTVAGTDMGRQLLGTDCDPELEARRLAKYPMGRFGTPEDIAEAAVFL-LSTKAAFVTGSVLAVDGGM 246          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: Y4MP_RHISN (Uncharacterized short-chain type dehydrogenase/reductase y4mP OS=Rhizobium sp. (strain NGR234) GN=NGR_a02430 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.658e-16
Identity = 56/171 (32.75%), Postives = 88/171 (51.46%), Query Frame = -3
Query:   80 WQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGN--IDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTA-KLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 583
            WQ ++ +N+TGV   +QV IP +                               G I  ++SV    G       +YSAAKAGV+GL KA+A+E+   +I VN + PG I +D+T  KL  ++   I++ IPL R G   +V  +  FLA +  + Y+TG V++++GGM++
Sbjct:  109 WQRIVAVNMTGVLNLSQVFIPNM--------------------------RQNGGGSIACMSSVSAQRGGGIFGGPHYSAAKAGVLGLAKAMAREFGPDSIRVNCVTPGLIQTDITGDKLSAEMRADIVKGIPLSRLGDARDVANIYLFLA-SDLSAYVTGAVIDVNGGMLI 252          
The following BLAST results are available for this feature:
BLAST of CX674998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
FABG_AGGAC1.227e-1948.673-oxoacyl-[acyl-carrier-protein] reductase OS=Aggr... [more]
KDUD_BACSU4.663e-1935.932-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=B... [more]
DHKR_STRCM7.953e-1936.72Monensin polyketide synthase putative ketoacyl red... [more]
PHAB_PARDE1.039e-1836.53Acetoacetyl-CoA reductase OS=Paracoccus denitrific... [more]
ACT3_STRCO2.314e-1835.03Putative ketoacyl reductase OS=Streptomyces coelic... [more]
YXBG_BACSU1.500e-1732.56Uncharacterized oxidoreductase yxbG OS=Bacillus su... [more]
DHK1_STRVN1.500e-1735.59Granaticin polyketide synthase putative ketoacyl r... [more]
Y4VI_RHISN1.959e-1742.86Uncharacterized short-chain type dehydrogenase/red... [more]
HCDS_XANP21.959e-1733.722-(S)-hydroxypropyl-CoM dehydrogenase OS=Xanthobac... [more]
Y4MP_RHISN1.658e-1632.75Uncharacterized short-chain type dehydrogenase/red... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_59A04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-59A04-A7-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674998 ID=CX674998; Name=CX674998; organism=Citrus sinensis; type=EST; length=594bp
TTTCAACCCATTCGATCTTACATATGATAGCTACAGGTCAGAACTGAAAC
TAAACCAGGCATAATGGGTCACTGACCTACATAACCATTCCTCCGTCAAT
ATTAAGCACCTGTCCAGTAATGTAACCGGTTGCGGGATTGATGGCCAAGA
ATTCCTCCAGTCCAACAACTTCTTCAGGTTGGCCATACCTTCCTAACGGG
ATTTTCTCCAAGATCTTCTTTTCTAGGTCTTCGCCAAGCTTGGCGGTCAT
ATCAGACGCGATGAATCCTGGTGCAATAGTATTGACATTAATGTTTCTGC
TTGCATATTCCTTTGCAACAGCTTTTGTCAGGCCAATAACACCTGCTTTT
GCAGCACTGTAATTGGCTTGGTCAATATTTCCAACCAGACCAACAACTGA
TGCTATATTGATTATTCTTCCCTTTTTCTTCTTCATCATGATTTTGGCTG
CTGCCTGCAAAGATAAATGGCCTCAGTTCCAATATACTTTAGCATCCATT
AGCATAACTAGTAAGATCATAGGAATGTGCACCTGTGTACACAGGAATAC
ACCTGTAAGATTCAGATCAATAACGTCCTGCCATTTGTGACCCT
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