CX674998

Overview
NameCX674998
Unique NameCX674998
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length594
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: PECR_RAT (Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus GN=Pecr PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.128e-15
Identity = 60/173 (34.68%), Postives = 85/173 (49.13%), Query Frame = -3
Query:   80 WQDVIDLNLTGVF-LCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFI----ASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 583
            WQ VI+ NLTG F +C  V+               W   H               G I+NI  ++   G    A+  AA+AGV  LTK +A  +AS  + +N +APG I    A D   +LG+ + +   E IP  R G PEE+  L  FL ++PA  +ITGQ++N+DGG  +
Sbjct:  124 WQAVIETNLTGTFYMCKAVYNS-------------WMKDH--------------GGSIVNIIVLLNN-GFPTAAHSGAARAGVYNLTKTMALTWASSGVRINCVAPGTIYSQTAVDNYGELGQTMFEMAFENIPAKRVGLPEEISPLVCFL-LSPAASFITGQLINVDGGQAL 267          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: BACC2_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.085e-15
Identity = 57/173 (32.95%), Postives = 86/173 (49.71%), Query Frame = -3
Query:   89 WQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAK--------LGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGG 583
            W  V+++NLTG+FL ++      L  ML   K                      G IIN  SV G+V   D   Y+A+K GV+ LT+++A +YA  NI VN + PG I + +  K          E+++K+  +  PL R G+PEE+  +  FLA +  + Y+TG  +  DGG
Sbjct:  104 WNKVLNVNLTGMFLMSK----HALKYMLKSGK----------------------GNIINTCSVGGVVAWPDIPAYNASKGGVLQLTRSMAVDYAKHNIRVNCVCPGIIDTPLNEKSFLENNEGTLEEIKKEKAKVNPLLRLGKPEEIANVMLFLA-SDLSSYMTGSAITADGG 249          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: IDNO_ECOLI (Gluconate 5-dehydrogenase OS=Escherichia coli (strain K12) GN=idnO PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.335e-15
Identity = 53/171 (30.99%), Postives = 87/171 (50.88%), Query Frame = -3
Query:   80 KWQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGED--LEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 586
            +W DVI +N T VFL +Q      +   +++ K                      G++INI S+   +G      Y+A+K  V  LT+ +  E A  NI VN IAPG+  ++MT  L ED      + ++ P  R+G P+E++G   FL+ + A+ ++ G +L +DGGM++
Sbjct:  109 EWNDVIAVNQTAVFLVSQA-----VTRHMVERKA---------------------GKVINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLS-SKASDFVNGHLLFVDGGMLV 252          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: IDNO_ECOL6 (Gluconate 5-dehydrogenase OS=Escherichia coli O6 GN=idnO PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.335e-15
Identity = 53/171 (30.99%), Postives = 87/171 (50.88%), Query Frame = -3
Query:   80 KWQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGED--LEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 586
            +W DVI +N T VFL +Q      +   +++ K                      G++INI S+   +G      Y+A+K  V  LT+ +  E A  NI VN IAPG+  ++MT  L ED      + ++ P  R+G P+E++G   FL+ + A+ ++ G +L +DGGM++
Sbjct:  109 EWNDVIAVNQTAVFLVSQA-----VTRHMVERKA---------------------GKVINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLS-SKASDFVNGHLLFVDGGMLV 252          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: PECR_MOUSE (Peroxisomal trans-2-enoyl-CoA reductase OS=Mus musculus GN=Pecr PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.552e-14
Identity = 58/173 (33.53%), Postives = 85/173 (49.13%), Query Frame = -3
Query:   80 WQDVIDLNLTGVF-LCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFI----ASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 583
            W  VI+ NLTG F +C +V+               W   H               G I+NI  ++   G    A+  AA+ GV  LTK++A  +AS  + +N +APG I    A D   ++G+ L +   + IP  R G PEE+  L  FL ++PA  YITGQ++N+DGG  +
Sbjct:  124 WHAVIETNLTGTFYMCKEVYNS-------------WMREH--------------GGSIVNIIVLLNN-GFPTAAHTGAAREGVYNLTKSMALAWASSGVRINCVAPGTIYSQTAVDNYGEMGQTLFEMAFDSIPAKRLGVPEEISPLVCFL-LSPAASYITGQLINVDGGQAL 267          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: BACC_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 1.552e-14
Identity = 56/173 (32.37%), Postives = 84/173 (48.55%), Query Frame = -3
Query:   89 WQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAK--------LGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGG 583
            W  V+ +NLTG+FL ++  +  +L                             KG IIN  SV GLV   D   Y+A+K GV+ LTK++A +YA   I VN + PG I + +  K          E+++K+  +  PL R G+PEE+  +  FLA +  + Y+TG  +  DGG
Sbjct:  104 WNKVLQVNLTGMFLMSKHALKHMLAA--------------------------GKGNIINTCSVGGLVAWPDIPAYNASKGGVLQLTKSMAVDYAKHQIRVNCVCPGIIDTPLNEKSFLENNEGTLEEIKKEKAKVNPLLRLGKPEEIANVMLFLA-SDLSSYMTGSAITADGG 249          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: SOU1_CANAL (Sorbose reductase SOU1 OS=Candida albicans GN=SOU1 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.027e-14
Identity = 52/168 (30.95%), Postives = 82/168 (48.81%), Query Frame = -3
Query:   89 KWQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQ--ANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGG 586
            +W+ ++D +L GV+ C                                       G +I  +S+ G + NI Q  A Y+AAKA    L K+++ E+AS    VN+I+PG+I +D+      +++KK  +  PLGR G P+E+VG   +LA N +T Y TG  + +DGG
Sbjct:  137 QWKKIVDCDLNGVYYCAHT--------------------------VGQIFKKNKSGSLIITSSMSGTIVNIPQLQAPYNAAKAACTHLAKSLSVEWASFGARVNSISPGYILTDIADFADPEMKKKWWQLTPLGREGLPQELVGAYLYLASNAST-YTTGSNIAVDGG 277          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: BUDC_KLEPN (Acetoin(diacetyl) reductase OS=Klebsiella pneumoniae GN=budC PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 2.648e-14
Identity = 47/124 (37.90%), Postives = 69/124 (55.65%), Query Frame = -3
Query:   83 GRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEK-----------KILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMV 421
            G+IIN  S  G VGN + A YS++K  V GLT+  A++ A   I VN   PG + + M A++   + +           +  ++I LGR  +PE+V     +LA +P + Y+TGQ L IDGGMV
Sbjct:  132 GKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLA-SPDSDYMTGQSLLIDGGMV 254          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: BAIA2_EUBSP (Bile acid 7-dehydroxylase 2 OS=Eubacterium sp. (strain VPI 12708) GN=baiA2 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.648e-14
Identity = 43/110 (39.09%), Postives = 67/110 (60.91%), Query Frame = -3
Query:   92 GRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDG 421
            G IIN ASV G+ G++    Y A+KA VIGLT  + +E   +NI V  +APG + +DMT     ++ +  L+ +P+ R  +PEE+  +  FLA + A+G IT   +++DG
Sbjct:  137 GVIINTASVTGIFGSLSGVGYPASKASVIGLTHGLGREIIRKNIRVVGVAPGVVNTDMTNGNPPEIMEGYLKALPMKRMLEPEEIANVYLFLASDLASG-ITATTVSVDG 245          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: Y325_THEMA (Uncharacterized oxidoreductase TM_0325 OS=Thermotoga maritima GN=TM_0325 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.458e-14
Identity = 44/117 (37.61%), Postives = 72/117 (61.54%), Query Frame = -3
Query:   89 GRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASD-MTAKL-----GEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGG 421
            G I+N++S  GL+G   +  YS +KA ++GLT+++A +Y    I VN + PG   S+ + A++      E+L KK+  +IP+ R G+ EE+     F A + A G++TG ++NIDGG
Sbjct:  132 GVIVNVSSEAGLIGIPRRCVYSVSKAALLGLTRSLAVDYVDYGIRVNAVCPGTTQSEGLMARVKASPNPEELLKKMTSRIPMKRLGKEEEIAFAILFAACDEA-GFMTGSIINIDGG 247          
The following BLAST results are available for this feature:
BLAST of CX674998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
PECR_RAT3.128e-1534.68Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus ... [more]
BACC2_BACSU4.085e-1532.95Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
IDNO_ECOLI5.335e-1530.99Gluconate 5-dehydrogenase OS=Escherichia coli (str... [more]
IDNO_ECOL65.335e-1530.99Gluconate 5-dehydrogenase OS=Escherichia coli O6 G... [more]
PECR_MOUSE1.552e-1433.53Peroxisomal trans-2-enoyl-CoA reductase OS=Mus mus... [more]
BACC_BACSU1.552e-1432.37Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
SOU1_CANAL2.027e-1430.95Sorbose reductase SOU1 OS=Candida albicans GN=SOU1... [more]
BUDC_KLEPN2.648e-1437.90Acetoin(diacetyl) reductase OS=Klebsiella pneumoni... [more]
BAIA2_EUBSP2.648e-1439.09Bile acid 7-dehydroxylase 2 OS=Eubacterium sp. (st... [more]
Y325_THEMA3.458e-1437.61Uncharacterized oxidoreductase TM_0325 OS=Thermoto... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_59A04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-59A04-A7-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674998 ID=CX674998; Name=CX674998; organism=Citrus sinensis; type=EST; length=594bp
TTTCAACCCATTCGATCTTACATATGATAGCTACAGGTCAGAACTGAAAC
TAAACCAGGCATAATGGGTCACTGACCTACATAACCATTCCTCCGTCAAT
ATTAAGCACCTGTCCAGTAATGTAACCGGTTGCGGGATTGATGGCCAAGA
ATTCCTCCAGTCCAACAACTTCTTCAGGTTGGCCATACCTTCCTAACGGG
ATTTTCTCCAAGATCTTCTTTTCTAGGTCTTCGCCAAGCTTGGCGGTCAT
ATCAGACGCGATGAATCCTGGTGCAATAGTATTGACATTAATGTTTCTGC
TTGCATATTCCTTTGCAACAGCTTTTGTCAGGCCAATAACACCTGCTTTT
GCAGCACTGTAATTGGCTTGGTCAATATTTCCAACCAGACCAACAACTGA
TGCTATATTGATTATTCTTCCCTTTTTCTTCTTCATCATGATTTTGGCTG
CTGCCTGCAAAGATAAATGGCCTCAGTTCCAATATACTTTAGCATCCATT
AGCATAACTAGTAAGATCATAGGAATGTGCACCTGTGTACACAGGAATAC
ACCTGTAAGATTCAGATCAATAACGTCCTGCCATTTGTGACCCT
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