FC871921
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC871921 vs. ExPASy Swiss-Prot
Match: RPN11_ENCCU (26S proteasome regulatory subunit RPN11 OS=Encephalitozoon cuniculi GN=RPN11 PE=1 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 7.812e-49 Identity = 109/215 (50.70%), Postives = 131/215 (60.93%), Query Frame = 3 Query: 6 MLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQAFIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTVIF 650 M+ +LK TGR E VVGWYHSHPGFGCWLS VDI+TQQSFE L +RAVAVVVDPIQSVKGKVVIDAFRLI+ Q +LG EPRQ TSN+G+L P++ + IHGLN+HYYS I R W D L L D SK +E L L Y KA +EE L + +A VGR D ++ L E + N + +L + IF Sbjct: 85 MMSILKATGRHETVVGWYHSHPGFGCWLSTVDISTQQSFEKLCKRAVAVVVDPIQSVKGKVVIDAFRLIDNQLGVLGGEPRQVTSNIGYLKTPTLISIIHGLNKHYYSFNITCRKNDFEQKMLLNLHRKTWADNLKLG--DVRSKR-----EEALKLIESYGKAFEEEKNLAGKNPDMAKVGRIDYRRRLLEKCEESIMENTIYSLLYSIHRYIF 292
BLAST of FC871921 vs. ExPASy Swiss-Prot
Match: YPT5_CAEEL (Uncharacterized protein F37A4.5 OS=Caenorhabditis elegans GN=F37A4.5 PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.247e-46 Identity = 98/221 (44.34%), Postives = 132/221 (59.73%), Query Frame = 3 Query: 9 LDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMML-----GQEPRQTTSNLGHLNKPSIQAFIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELP------PEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLD 638 +D+LK GR E VVGWYHSHPGFGCWLS VD+NTQQSFEAL+ RAVAVVVDPIQSVKGKV++DAFR +NP + + EPRQTTSNLGHL KPS+ + +HGL YYS+ + YR W D L + + K E+ + + L +NK + E E P + + G+ +AK+ L+ S+L++ ++ L M++ Sbjct: 94 MDLLKLVGRTENVVGWYHSHPGFGCWLSSVDVNTQQSFEALHPRAVAVVVDPIQSVKGKVMLDAFRSVNPLNLQIRPLAPTAEPRQTTSNLGHLTKPSLISVVHGLGTKYYSLNVAYRMGSNEQKMLMCLNKKSWYDQLNMSTYSELEKKQEEKFKSINKLIAVFNKDIDEVKEKPIADKKGKTQEEVKKFGKINAKQQLQMITSSLLNDSLCHQLTAMIN 314
BLAST of FC871921 vs. ExPASy Swiss-Prot
Match: CSN5_DICDI (COP9 signalosome complex subunit 5 OS=Dictyostelium discoideum GN=csn5 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.111e-16 Identity = 47/114 (41.23%), Postives = 69/114 (60.53%), Query Frame = 3 Query: 9 LDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVK-GKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQAF-IHGLNRHYYSIAINY 344 L+++KQTGR E +GWYHSHPG+GCWLSG+D+ TQ + ++ + +V+DP ++V GKV I AFR PQ + P + S + I+ F +H + YYS+ I Y Sbjct: 120 LELIKQTGRLENALGWYHSHPGYGCWLSGIDVGTQSVNQQYSEPWLGIVIDPTRTVSAGKVEIGAFRTY-PQGY---KPPNEGPSEYQSIPLSKIEDFGVH--CKQYYSLEITY 227
BLAST of FC871921 vs. ExPASy Swiss-Prot
Match: CSN5_USTMA (COP9 signalosome complex subunit 5 OS=Ustilago maydis GN=RRI1 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.718e-16 Identity = 38/67 (56.72%), Postives = 50/67 (74.63%), Query Frame = 3 Query: 9 LDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSV-KGKVVIDAFR 206 LD K+ GR E VVGWYHSHPG+GCWLSG+D+NTQ++ + VA+V+DP +++ GKV I AFR Sbjct: 129 LDHSKEVGRLENVVGWYHSHPGYGCWLSGIDVNTQRTNQQFQDPFVAIVIDPNRTISSGKVDIGAFR 195
BLAST of FC871921 vs. ExPASy Swiss-Prot
Match: CSN5_DROME (COP9 signalosome complex subunit 5 OS=Drosophila melanogaster GN=CSN5 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.942e-15 Identity = 47/114 (41.23%), Postives = 69/114 (60.53%), Query Frame = 3 Query: 9 LDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVK-GKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQAF-IHGLNRHYYSIAINY 344 ++ K+ GR E VGWYHSHPG+GCWLSG+D++TQ + + VA+VVDP+++V GKV + AFR +EP + + LNK I+ F +H + YY + I+Y Sbjct: 118 MEAAKEVGRMEHAVGWYHSHPGYGCWLSGIDVSTQMLNQTYQEPFVAIVVDPVRTVSAGKVCLGAFRTYPKGYKPPNEEPSEYQTI--PLNK--IEDFGVH--CKQYYPLEISY 225
BLAST of FC871921 vs. ExPASy Swiss-Prot
Match: CSN5_XENLA (COP9 signalosome complex subunit 5 OS=Xenopus laevis GN=cops5 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.651e-15 Identity = 64/226 (28.32%), Postives = 105/226 (46.46%), Query Frame = 3 Query: 9 LDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVK-GKVVIDAFRLINPQTMMLG-QEPRQTTSNLGHLNKPSIQAF-IHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKA------------VQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDT 641 ++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + + VAVV+DP +++ GKV + AFR T G + P + S + I+ F +H + YY++ + Y W + L+ ++ E T ++ +L+ K ++ ++ D +KLA A +D+ K E + LMS I L ++T Sbjct: 119 IENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFR-----TYPKGYKPPDEGPSEYQTIPLNKIEDFGVH--CKQYYALEVTYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNA---EYTTGQVFDLSEKLEQSEAQLGRGSFMLGLESHDRKSEDKLAKAT---RDSCKTTIEAIHGLMSQVIKDKLFNQINT 331
BLAST of FC871921 vs. ExPASy Swiss-Prot
Match: CSN5_EMENI (COP9 signalosome complex subunit 5 OS=Emericella nidulans GN=rri1 PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 5.651e-15 Identity = 61/213 (28.64%), Postives = 95/213 (44.60%), Query Frame = 3 Query: 9 LDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVK-GKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQAFIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQ-------DAKKHLEEHVSNLMSSNIVQTL 623 L ++ GR E VGWYHSHPG+GCWLSG+D++T Q + ++ VAVV+DP +++ GKV I AFR +E + LNK H HYYS+ ++ W L+ T + ++ML+L+ K + + + PP A V Q D ++ + E V L+++ + L Sbjct: 117 LQSCREAGRMENAVGWYHSHPGYGCWLSGIDVST-QDMQQMSGPFVAVVIDPERTISAGKVDIGAFRTFPKDYTPPKEEQEEDEYQTVPLNKAE-DFGAHA--SHYYSLEVSLFKSALDTEILSLLWNKYWVATLSQSPL---FTTRDYGSKQMLDLSQKTRRVARGIESNPPRGGAPTQVRDQQLERVVKDGQRIVSEEVKGLLAAEVKMQL 322
BLAST of FC871921 vs. ExPASy Swiss-Prot
Match: CSN5_YARLI (COP9 signalosome complex subunit 5 OS=Yarrowia lipolytica GN=RRI1 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.380e-15 Identity = 44/114 (38.60%), Postives = 66/114 (57.89%), Query Frame = 3 Query: 9 LDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVK-GKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQAFIHGL-NRHYYSIAINY 344 L LK GR E +VGWYHSHPG+GCWLSG+D++TQ + + +AVVVDP +++ GKV I AFR + P++ T + P +A +G + YY + +++ Sbjct: 122 LQGLKDVGRRENIVGWYHSHPGYGCWLSGIDVDTQFQNQQFQEPFLAVVVDPNRTISAGKVEIGAFRTYPKDY----KPPKKATKQNQDQSVPLSKAKDYGAHSERYYELDVSF 231
BLAST of FC871921 vs. ExPASy Swiss-Prot
Match: CSN5_GIBZE (COP9 signalosome complex subunit 5 OS=Gibberella zeae GN=RRI1 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.259e-14 Identity = 44/114 (38.60%), Postives = 66/114 (57.89%), Query Frame = 3 Query: 9 LDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSV-KGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQAFIHGLN-RHYYSIAINY 344 LD+ + GR E VVGWYHSHPG+GCWLSG+D++T+ + +AVV+DP +++ GKV I AFR T +P ++ G P +A G + YYS+ +++ Sbjct: 118 LDLCRAQGRQENVVGWYHSHPGYGCWLSGIDVDTEAMQQQFQDPFLAVVIDPDRTINSGKVDIGAFR-----TYPADYKPSGGVTSDGFQAVPLAKAAEFGAHASRYYSLEVSH 226
BLAST of FC871921 vs. ExPASy Swiss-Prot
Match: CSN5_DANRE (COP9 signalosome complex subunit 5 OS=Danio rerio GN=cops5 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.259e-14 Identity = 64/226 (28.32%), Postives = 105/226 (46.46%), Query Frame = 3 Query: 9 LDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVK-GKVVIDAFRLINPQTMMLG-QEPRQTTSNLGHLNKPSIQAF-IHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKA------------VQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDT 641 ++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + + VAVV+DP +++ GKV + AFR T G + P + S + I+ F +H + YY++ ++Y W + L+ ++ + T ++ +L+ K +A + D +KLA A +D+ K E + LMS I L ++T Sbjct: 119 IENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFR-----TYPKGYKPPDEGPSEYQTIPLNKIEDFGVH--CKQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNA---DYTTGQVFDLSEKLEQAEAQLGRGSFMLGLDTHDRKSEDKLAKAT---RDSCKTTIEAIHGLMSQVIKDKLFNQVNT 331 The following BLAST results are available for this feature:
BLAST of FC871921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC871921 ID=FC871921; Name=FC871921; organism=Citrus sinensis; type=EST; length=821bpback to top |