EY665760

Overview
NameEY665760
Unique NameEY665760
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: MDLB_PSEPU ((S)-mandelate dehydrogenase OS=Pseudomonas putida GN=mdlB PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.366e-30
Identity = 86/241 (35.68%), Postives = 130/241 (53.94%), Query Frame = 1
Query:   91 MAAEPVNLNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINPQLKN----LEGLLSPKVTSD---HG------------SNLKTGC---REGMEAFFNWEGFKRLK 747
            M+    N+ ++++L +  LPKM YD+  GGAEDE+ +K N + F +  F+P+ LVDVSR  L   +L  + S P++I PT  +    P+G++A ARAA       VLS  S+ SIE++A  C+   ++QLYV+  R+IA  +V +A   G+  LVLT D    G RE D+ N+   P   +    L+G L P+ + D   HG            S+L+         M+A FNWE  + L+
Sbjct:    1 MSQNLFNVEDYRKLRQKRLPKMVYDYLEGGAEDEYGVKHNRDVFQQWRFKPKRLVDVSRRSLQAEVLGKRQSMPLLIGPTGLNGALWPKGDLALARAATKAGIPFVLSTASNMSIEDLARQCDGDLWFQLYVI-HREIAQGMVLKALHTGYTTLVLTTDVAVNGYRERDLHNRFKIPMSYSAKVVLDGCLHPRWSLDFVRHGMPQLANFVSSQTSSLEMQAALMSRQMDASFNWEALRWLR 240          
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: CYB2_YEAST (Cytochrome b2, mitochondrial OS=Saccharomyces cerevisiae GN=CYB2 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 6.780e-30
Identity = 86/233 (36.91%), Postives = 117/233 (50.21%), Query Frame = 1
Query:  106 VNLNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANP-EGEVATARAAASCNT-----IMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINPQLKNLEGLLSPKVTSDHGSNLKTGCREGMEAFFN----WEGFKRLKIFKTFPIFI 774
            +NL +F+ LA   L K  + +Y+ GA DE T +EN  A+HRI F+P+ILVDV ++D+ST +L   +  P  ++ TA  KL NP EGE   AR      T     I  L+  S   I E A S   + +YQLYV   R I   LV+  E+ G KAL +T DAP LG+RE+D+K K  N +         PK           G    +  F +    W+  + LK     PI I
Sbjct:  203 INLYDFEYLASQTLTKQAWAYYSSGANDEVTHRENHNAYHRIFFKPKILVDVRKVDISTDMLGSHVDVPFYVSATALCKLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSDKQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTK-------AGPKAMKKTNVEESQGASRALSKFIDPSLTWKDIEELKKKTKLPIVI 428          
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: HAOX2_MOUSE (Hydroxyacid oxidase 2 OS=Mus musculus GN=Hao2 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.973e-29
Identity = 82/192 (42.71%), Postives = 114/192 (59.38%), Query Frame = 1
Query:  112 LNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEE-VAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKR----------EEDIKNKMINPQLKNLEGLLSP 654
            L +F+  A+  L K  +DF  G A+D  T  +N+ AF RI  RPR L DVS+ID  TTI   +I+API I+PTA+H +A  +GE +TA+AA   N   V+S  +S ++E+ VAA+   + ++QLYV    DI   +VQR E  GFKALV+T DAP LG R          E +IK K +    ++  GL +P
Sbjct:    6 LADFKAQAQKQLSKTSWDFIEGEADDGITYNDNLAAFRRIRLRPRYLRDVSKIDTRTTIQGQEINAPICISPTAFHSIAWADGEKSTAKAAQKANICYVISSYASYTVEDIVAAAPGGLHWFQLYVQPDWDINKQMVQRIEALGFKALVVTVDAPVLGNRRGNKRSLLDLEANIKLKDLRSPGESKSGLPTP 197          
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_AGRVS (L-lactate dehydrogenase [cytochrome] OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=lldD PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.618e-23
Identity = 59/168 (35.12%), Postives = 89/168 (52.98%), Query Frame = 1
Query:  118 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINP 621
            +++E AR  LP   + +  GGA  EHT++ N++    +  R R+L  V  +D+STT+ D +++ P+++AP     +    GEV  ARAA      + LS  S   IEEV A+ N   ++QLYVL+ R      ++RA   G + LV T D P  G R  D  + M  P
Sbjct:    8 DYREAARRRLPPFLFHYIDGGAYSEHTMRRNIDDLADLALRQRVLKSVGTVDISTTLFDEELAMPVVLAPVGLTGMYARRGEVQAARAAEKKGIPLTLSTVSVCPIEEVQAASNRPIWFQLYVLRDRGFMKNALERAWAAGIRKLVFTVDMPVPGARYRDAHSGMSGP 175          
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_PSEFS (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas fluorescens (strain SBW25) GN=lldD PE=3 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.369e-22
Identity = 63/190 (33.16%), Postives = 96/190 (50.53%), Query Frame = 1
Query:  115 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINP---QLKNLEGLLSPKVTSDHG 675
            ++++  A+  LP+  +D+  GGA  EHT++ N      I+ R RIL +V  + L TT+   ++  P+I++P     +    GEV  A+AAA+      LS  S   IEEVA+      ++QLYVLK R      ++RA+  G   LV T D P  G R  D  + M  P   Q + L+ +  P+   D G
Sbjct:    7 SDYRAAAQRKLPRFLFDYIDGGAYAEHTMRANSSDLAEISLRQRILRNVDNLSLKTTVFGQELDMPVILSPVGLTGMYARRGEVQAAKAAANKGVPFCLSTVSVCPIEEVASQSARAIWFQLYVLKDRGFMRNALERAQAAGVTTLVFTVDMPTPGARYRDAHSGMSGPFAAQRRMLQAMTKPQWAFDVG 196          
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_ERWCT (L-lactate dehydrogenase [cytochrome] OS=Erwinia carotovora subsp. atroseptica GN=lldD PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.051e-22
Identity = 66/193 (34.20%), Postives = 96/193 (49.74%), Query Frame = 1
Query:  118 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINPQL---KNLEGLLSPKVTSDHGSNLK 687
            +++  A+  LP   + +  GGA  EHTL+ N      I  R RIL ++S + L T +   K++ P+++AP     +    GEV  ARAAA       LS  S   IEEVA + +   ++QLYVLK R    + ++RA+  G K LV T D P  G R  D  + M  P     + L+ +  P+   D G N K
Sbjct:    8 DYRAAAQRRLPPFLFHYIDGGAYGEHTLRRNTADLADIALRQRILKNMSDLSLETQLFGEKLAMPVVLAPVGLTGMYARRGEVQAARAAAQKGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRSALERAQAAGVKTLVFTVDMPTPGARYRDAHSGMSGPNAAARRMLQAVTHPQWAWDVGLNGK 200          
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_PSEU2 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas syringae pv. syringae (strain B728a) GN=lldD PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.984e-22
Identity = 60/169 (35.50%), Postives = 88/169 (52.07%), Query Frame = 1
Query:  115 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINP 621
            ++++  A+  LP+  +D+  GGA  EHTL+ N      I+ R R+L +V  + L T +    ++ PII++P     +    GEV  ARAAA+      LS  S  SIEEVA+  +   ++QLYVLK R      ++RA+  G   LV T D P  G R  D  + M  P
Sbjct:    7 SDYRAAAKRKLPRFLFDYIDGGAYAEHTLRANGSDLADISLRQRVLKNVDNVSLETRLFGESLAMPIILSPVGLSGMYARRGEVQVARAAANKRIPFCLSTVSVCSIEEVASQSDQAIWFQLYVLKDRGFMKNALERAKAAGVTTLVFTVDMPTPGARYRDAHSGMSGP 175          
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_XANP2 (L-lactate dehydrogenase [cytochrome] OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=lldD PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.204e-22
Identity = 62/169 (36.69%), Postives = 86/169 (50.89%), Query Frame = 1
Query:  115 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINP 621
            ++++E AR  LP   + +  GGA  E TL+ NVE    +  R R+L  V  +DLSTT+L  ++S P+ +AP     +    GEV  A+AA        LS  S  SIEEV +      ++QLYVLK R      ++RA   G + LV T D P  G R  D  + M  P
Sbjct:    7 SDYREAARRRLPPFLFHYIDGGAYAEATLRRNVEDLSDLALRQRVLKSVGEVDLSTTLLKQQLSMPVGLAPVGLTGMYARRGEVQAAQAATQKGIPFTLSTVSVCSIEEVQSQVGKPIWFQLYVLKDRGFMKNALERAWAAGIRTLVFTVDMPVPGARYRDAHSGMSGP 175          
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_SHISS (L-lactate dehydrogenase [cytochrome] OS=Shigella sonnei (strain Ss046) GN=lldD PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.796e-22
Identity = 68/219 (31.05%), Postives = 104/219 (47.49%), Query Frame = 1
Query:  115 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINPQL---KNLEGLLSPKVTSDHGSNLK----------TGCREGMEAFFNWEG 732
            ++++  A+  LP   + +  GGA  E+TL+ NVE    +  R RIL ++S + L TT+ + K+S P+ +AP     +    GEV  A+AA +      LS  S   IEEVA +     ++QLYVL+ R      ++RA+  G   LV T D P  G R  D  + M  P     + L+ +  P+   D G N +           G   G+E +  W G
Sbjct:    7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLG 225          
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_SHIFL (L-lactate dehydrogenase [cytochrome] OS=Shigella flexneri GN=lldD PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.796e-22
Identity = 68/219 (31.05%), Postives = 104/219 (47.49%), Query Frame = 1
Query:  115 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINPQL---KNLEGLLSPKVTSDHGSNLK----------TGCREGMEAFFNWEG 732
            ++++  A+  LP   + +  GGA  E+TL+ NVE    +  R RIL ++S + L TT+ + K+S P+ +AP     +    GEV  A+AA +      LS  S   IEEVA +     ++QLYVL+ R      ++RA+  G   LV T D P  G R  D  + M  P     + L+ +  P+   D G N +           G   G+E +  W G
Sbjct:    7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLG 225          
The following BLAST results are available for this feature:
BLAST of EY665760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
MDLB_PSEPU1.366e-3035.68(S)-mandelate dehydrogenase OS=Pseudomonas putida ... [more]
CYB2_YEAST6.780e-3036.91Cytochrome b2, mitochondrial OS=Saccharomyces cere... [more]
HAOX2_MOUSE1.973e-2942.71Hydroxyacid oxidase 2 OS=Mus musculus GN=Hao2 PE=2... [more]
LLDD_AGRVS1.618e-2335.12L-lactate dehydrogenase [cytochrome] OS=Agrobacter... [more]
LLDD_PSEFS1.369e-2233.16L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_ERWCT3.051e-2234.20L-lactate dehydrogenase [cytochrome] OS=Erwinia ca... [more]
LLDD_PSEU23.984e-2235.50L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_XANP25.204e-2236.69L-lactate dehydrogenase [cytochrome] OS=Xanthobact... [more]
LLDD_SHISS6.796e-2231.05L-lactate dehydrogenase [cytochrome] OS=Shigella s... [more]
LLDD_SHIFL6.796e-2231.05L-lactate dehydrogenase [cytochrome] OS=Shigella f... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665760 ID=EY665760; Name=EY665760; organism=Citrus sinensis; type=EST; length=869bp
CTTGACTTTGACTCTGCCGCCTATTCACTGTTGTAATCTGCTTCACGATC
GACCTTCATCAGTTGAAATTTTTAGTCATTCGGGTTTCAAATGGCAGCTG
AACCTGTTAATTTGAATGAGTTCCAAGAATTGGCAAGGCTGGCCCTTCCA
AAAATGTATTATGATTTCTACGCTGGTGGAGCAGAAGATGAACATACCCT
AAAAGAGAATGTGGAAGCCTTTCATAGAATTACGTTTCGGCCAAGAATTC
TTGTCGATGTCAGCAGAATAGATTTATCGACTACTATACTTGATTACAAA
ATCTCGGCTCCCATTATCATTGCTCCAACGGCTTGGCATAAGCTTGCAAA
CCCTGAAGGAGAGGTAGCCACAGCCAGAGCAGCAGCTTCATGTAACACCA
TAATGGTTTTATCCTTCACATCTAGCAGCTCCATAGAGGAGGTTGCGGCC
AGCTGCAATGCTGTTTGCTTCTATCAATTATATGTATTAAAGAAACGAGA
TATAGCAGCTACTCTAGTGCAGAGAGCTGAAAGGAATGGTTTTAAGGCTC
TTGTCCTAACTGCTGATGCTCCAAGACTTGGTAAAAGGGAGGAAGATATA
AAGAACAAAATGATTAACCCGCAGTTGAAAAATTTGGAAGGCCTCTTATC
ACCCAAAGTCACTTCTGATCACGGGTCAAATTTAAAAACTGGATGCCGGG
AAGGCATGGAAGCTTTTTTTAATTGGGAAGGATTTAAAAGGTTAAAAATA
TTTAAAACATTCCCCATTTTTATCAAGGGGGAAATTAAACCTTGAAAAAG
CAAAAAAAAGGTGGGGAAAAAAGGGTGTGGTGGGGATTTATTTCCCCCAC
ACCCCGGGAGCCCCAACAA
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