EY665760

Overview
NameEY665760
Unique NameEY665760
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_YERPE (L-lactate dehydrogenase [cytochrome] OS=Yersinia pestis GN=lldD PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.490e-18
Identity = 61/193 (31.61%), Postives = 89/193 (46.11%), Query Frame = 1
Query:  118 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINPQL---KNLEGLLSPKVTSDHGSNLK 687
            +++  A+  LP   + +  GGA +E TL+ N      I  R R+L ++S + L T +     + P+++ P     +    GEV  ARAA        LS  S   IEEVA +     ++QLYVLK R      + RA+  G K LV T D P  G R  D  + M  P     + L+ +  P+   D G N K
Sbjct:    8 DYRAAAQRKLPPFLFHYIDGGAYNEQTLRRNTADLADIALRQRVLKNMSELSLETQLFGETQAMPVVLGPVGLSGMYARRGEVQAARAADKKGIPFTLSTLSVCPIEEVAPAIARPMWFQLYVLKDRGFMRNALTRAQAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGK 200          
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_YERPB (L-lactate dehydrogenase [cytochrome] OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=lldD PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.490e-18
Identity = 61/193 (31.61%), Postives = 89/193 (46.11%), Query Frame = 1
Query:  118 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINPQL---KNLEGLLSPKVTSDHGSNLK 687
            +++  A+  LP   + +  GGA +E TL+ N      I  R R+L ++S + L T +     + P+++ P     +    GEV  ARAA        LS  S   IEEVA +     ++QLYVLK R      + RA+  G K LV T D P  G R  D  + M  P     + L+ +  P+   D G N K
Sbjct:    8 DYRAAAQRKLPPFLFHYIDGGAYNEQTLRRNTADLADIALRQRVLKNMSELSLETQLFGETQAMPVVLGPVGLSGMYARRGEVQAARAADKKGIPFTLSTLSVCPIEEVAPAIARPMWFQLYVLKDRGFMRNALTRAQAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGK 200          
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_YERPA (L-lactate dehydrogenase [cytochrome] OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=lldD PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.490e-18
Identity = 61/193 (31.61%), Postives = 89/193 (46.11%), Query Frame = 1
Query:  118 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINPQL---KNLEGLLSPKVTSDHGSNLK 687
            +++  A+  LP   + +  GGA +E TL+ N      I  R R+L ++S + L T +     + P+++ P     +    GEV  ARAA        LS  S   IEEVA +     ++QLYVLK R      + RA+  G K LV T D P  G R  D  + M  P     + L+ +  P+   D G N K
Sbjct:    8 DYRAAAQRKLPPFLFHYIDGGAYNEQTLRRNTADLADIALRQRVLKNMSELSLETQLFGETQAMPVVLGPVGLSGMYARRGEVQAARAADKKGIPFTLSTLSVCPIEEVAPAIARPMWFQLYVLKDRGFMRNALTRAQAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGK 200          
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_YERP3 (L-lactate dehydrogenase [cytochrome] OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=lldD PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.490e-18
Identity = 61/193 (31.61%), Postives = 89/193 (46.11%), Query Frame = 1
Query:  118 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINPQL---KNLEGLLSPKVTSDHGSNLK 687
            +++  A+  LP   + +  GGA +E TL+ N      I  R R+L ++S + L T +     + P+++ P     +    GEV  ARAA        LS  S   IEEVA +     ++QLYVLK R      + RA+  G K LV T D P  G R  D  + M  P     + L+ +  P+   D G N K
Sbjct:    8 DYRAAAQRKLPPFLFHYIDGGAYNEQTLRRNTADLADIALRQRVLKNMSELSLETQLFGETQAMPVVLGPVGLSGMYARRGEVQAARAADKKGIPFTLSTLSVCPIEEVAPAIARPMWFQLYVLKDRGFMRNALTRAQAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGK 200          
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_BART1 (L-lactate dehydrogenase [cytochrome] OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=lldD PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.776e-18
Identity = 54/168 (32.14%), Postives = 80/168 (47.62%), Query Frame = 1
Query:  118 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINP 621
            ++++ A+  LP   + +  GGA  E TL+ N      +  R RIL  V  +DLS  + + ++  PI++AP     +    GEV  A AA +      LS  S   I EV  +     ++QLYVLK R      ++RA  +G + LV T D P  G R  D  + M  P
Sbjct:    8 DYRKAAKRRLPPFLFHYIDGGAYAEETLRRNCSDLQALALRQRILRQVGGVDLSIKLFEQRLDLPIVLAPVGLTGMYARRGEVQAAHAATAKGIPFTLSSVSVCPIAEVQEAVGGGFWFQLYVLKDRGFMRDALERAWASGVRTLVFTVDMPIPGARYRDAHSGMSGP 175          
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LA2M_MYCSM (Lactate 2-monooxygenase OS=Mycobacterium smegmatis PE=1 SV=3)

HSP 1 Score: 88.5817 bits (218), Expect = 5.040e-17
Identity = 62/207 (29.95%), Postives = 100/207 (48.31%), Query Frame = 1
Query:  103 PVNLNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLA--NPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASC-NAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINPQLKNLEGLLSPKVTSDHGSNLKTGCREGMEA 714
            P++  +++  A+ ALP     + AGG+ DEHT + NVEAF      PR+L+  +  DLS  +     +AP+  AP     L   +  G+ A+A+A+A      + S  + SS+E++     +   ++QLY  + RD+A + ++RAE  G+  LV+T D    G R  D+           L GL      +D     K     G+EA
Sbjct:   24 PMSYADWEAHAQQALPPGVLSYVAGGSGDEHTQRANVEAFKHWGLMPRMLMAATERDLSVELWGKTWAAPMFFAPIGVIALCAQDGHGDAASAQASARTGVPYITSTLAVSSLEDIRKHAGDTPAYFQLYYPEDRDLAESFIRRAEEAGYDGLVITLDTWIFGWRPRDLTIS----NFPFLRGLCLTNYVTDPVFQKKFKAHSGVEA 226          
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: YKN3_SCHPO (Uncharacterized lactate 2-monooxygenase PB1A11.03 OS=Schizosaccharomyces pombe GN=SPAPB1A11.03 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.766e-15
Identity = 71/250 (28.40%), Postives = 113/250 (45.20%), Query Frame = 1
Query:   85 FQMAAEPVNLNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEV-AASCNAVCFYQLYVLKK--RDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKN---KMINPQLKNLE-GLLSP----KVTSDHGSNLKTGCREGMEAF---------FNWEGFKRLKIFKTFPIFI 774
            FQ     V+   +++LA   + K    +  G A    T  +N+E+F + +  P  L+     DLSTT+   K   PI +AP    K+ NPEGE  +  AA   +   ++S  S++S E++  AS     +YQLY      +DI  +L+ RA++ G + L++T D   LG R  D+ N     +NP    +E G   P    +    HG  ++    E  + F          +WE  K L+     PI +
Sbjct:   27 FQRPQITVDGRHWEQLAVERMTKDAAGYVYGCAGKRETYDKNMESFKKWSIIPNRLIKSGFPDLSTTVFGQKYPFPIALAPVGVQKIFNPEGESGSCAAATREHIPYIISTASATSFEDIEKASGPGERWYQLYWPSNDHQDITISLLNRAKKTGCRVLIVTLDTFILGWRPSDMDNGYDPFLNPDSIGVEHGFSDPVFRKQFKEKHGVEVEENMLEAAKEFAGIVFPGISHDWEDLKFLRKHWDGPIVL 276          
The following BLAST results are available for this feature:
BLAST of EY665760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
LLDD_YERPE3.490e-1831.61L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPB3.490e-1831.61L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPA3.490e-1831.61L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERP33.490e-1831.61L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_BART17.776e-1832.14L-lactate dehydrogenase [cytochrome] OS=Bartonella... [more]
LA2M_MYCSM5.040e-1729.95Lactate 2-monooxygenase OS=Mycobacterium smegmatis... [more]
YKN3_SCHPO2.766e-1528.40Uncharacterized lactate 2-monooxygenase PB1A11.03 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665760 ID=EY665760; Name=EY665760; organism=Citrus sinensis; type=EST; length=869bp
CTTGACTTTGACTCTGCCGCCTATTCACTGTTGTAATCTGCTTCACGATC
GACCTTCATCAGTTGAAATTTTTAGTCATTCGGGTTTCAAATGGCAGCTG
AACCTGTTAATTTGAATGAGTTCCAAGAATTGGCAAGGCTGGCCCTTCCA
AAAATGTATTATGATTTCTACGCTGGTGGAGCAGAAGATGAACATACCCT
AAAAGAGAATGTGGAAGCCTTTCATAGAATTACGTTTCGGCCAAGAATTC
TTGTCGATGTCAGCAGAATAGATTTATCGACTACTATACTTGATTACAAA
ATCTCGGCTCCCATTATCATTGCTCCAACGGCTTGGCATAAGCTTGCAAA
CCCTGAAGGAGAGGTAGCCACAGCCAGAGCAGCAGCTTCATGTAACACCA
TAATGGTTTTATCCTTCACATCTAGCAGCTCCATAGAGGAGGTTGCGGCC
AGCTGCAATGCTGTTTGCTTCTATCAATTATATGTATTAAAGAAACGAGA
TATAGCAGCTACTCTAGTGCAGAGAGCTGAAAGGAATGGTTTTAAGGCTC
TTGTCCTAACTGCTGATGCTCCAAGACTTGGTAAAAGGGAGGAAGATATA
AAGAACAAAATGATTAACCCGCAGTTGAAAAATTTGGAAGGCCTCTTATC
ACCCAAAGTCACTTCTGATCACGGGTCAAATTTAAAAACTGGATGCCGGG
AAGGCATGGAAGCTTTTTTTAATTGGGAAGGATTTAAAAGGTTAAAAATA
TTTAAAACATTCCCCATTTTTATCAAGGGGGAAATTAAACCTTGAAAAAG
CAAAAAAAAGGTGGGGAAAAAAGGGTGTGGTGGGGATTTATTTCCCCCAC
ACCCCGGGAGCCCCAACAA
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