EY665760

Overview
NameEY665760
Unique NameEY665760
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_SHIF8 (L-lactate dehydrogenase [cytochrome] OS=Shigella flexneri serotype 5b (strain 8401) GN=lldD PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.796e-22
Identity = 68/219 (31.05%), Postives = 104/219 (47.49%), Query Frame = 1 
Query:  115 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINPQL---KNLEGLLSPKVTSDHGSNLK----------TGCREGMEAFFNWEG 732
            ++++  A+  LP   + +  GGA  E+TL+ NVE    +  R RIL ++S + L TT+ + K+S P+ +AP     +    GEV  A+AA +      LS  S   IEEVA +     ++QLYVL+ R      ++RA+  G   LV T D P  G R  D  + M  P     + L+ +  P+   D G N +           G   G+E +  W G
Sbjct:    7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLG 225
[Close]
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_SHIDS (L-lactate dehydrogenase [cytochrome] OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=lldD PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.796e-22
Identity = 68/219 (31.05%), Postives = 104/219 (47.49%), Query Frame = 1 
Query:  115 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINPQL---KNLEGLLSPKVTSDHGSNLK----------TGCREGMEAFFNWEG 732
            ++++  A+  LP   + +  GGA  E+TL+ NVE    +  R RIL ++S + L TT+ + K+S P+ +AP     +    GEV  A+AA +      LS  S   IEEVA +     ++QLYVL+ R      ++RA+  G   LV T D P  G R  D  + M  P     + L+ +  P+   D G N +           G   G+E +  W G
Sbjct:    7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLG 225
[Close]
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_SHIBS (L-lactate dehydrogenase [cytochrome] OS=Shigella boydii serotype 4 (strain Sb227) GN=lldD PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.796e-22
Identity = 68/219 (31.05%), Postives = 104/219 (47.49%), Query Frame = 1 
Query:  115 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINPQL---KNLEGLLSPKVTSDHGSNLK----------TGCREGMEAFFNWEG 732
            ++++  A+  LP   + +  GGA  E+TL+ NVE    +  R RIL ++S + L TT+ + K+S P+ +AP     +    GEV  A+AA +      LS  S   IEEVA +     ++QLYVL+ R      ++RA+  G   LV T D P  G R  D  + M  P     + L+ +  P+   D G N +           G   G+E +  W G
Sbjct:    7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADTHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLG 225
[Close]
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_SHIB3 (L-lactate dehydrogenase [cytochrome] OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=lldD PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.796e-22
Identity = 68/219 (31.05%), Postives = 104/219 (47.49%), Query Frame = 1 
Query:  115 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINPQL---KNLEGLLSPKVTSDHGSNLK----------TGCREGMEAFFNWEG 732
            ++++  A+  LP   + +  GGA  E+TL+ NVE    +  R RIL ++S + L TT+ + K+S P+ +AP     +    GEV  A+AA +      LS  S   IEEVA +     ++QLYVL+ R      ++RA+  G   LV T D P  G R  D  + M  P     + L+ +  P+   D G N +           G   G+E +  W G
Sbjct:    7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLG 225
[Close]
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_ECOSM (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.796e-22
Identity = 68/219 (31.05%), Postives = 104/219 (47.49%), Query Frame = 1 
Query:  115 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINPQL---KNLEGLLSPKVTSDHGSNLK----------TGCREGMEAFFNWEG 732
            ++++  A+  LP   + +  GGA  E+TL+ NVE    +  R RIL ++S + L TT+ + K+S P+ +AP     +    GEV  A+AA +      LS  S   IEEVA +     ++QLYVL+ R      ++RA+  G   LV T D P  G R  D  + M  P     + L+ +  P+   D G N +           G   G+E +  W G
Sbjct:    7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLG 225
[Close]
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_ECOSE (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain SE11) GN=lldD PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.796e-22
Identity = 68/219 (31.05%), Postives = 104/219 (47.49%), Query Frame = 1 
Query:  115 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINPQL---KNLEGLLSPKVTSDHGSNLK----------TGCREGMEAFFNWEG 732
            ++++  A+  LP   + +  GGA  E+TL+ NVE    +  R RIL ++S + L TT+ + K+S P+ +AP     +    GEV  A+AA +      LS  S   IEEVA +     ++QLYVL+ R      ++RA+  G   LV T D P  G R  D  + M  P     + L+ +  P+   D G N +           G   G+E +  W G
Sbjct:    7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLG 225
[Close]
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_ECOLU (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.796e-22
Identity = 68/219 (31.05%), Postives = 104/219 (47.49%), Query Frame = 1 
Query:  115 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINPQL---KNLEGLLSPKVTSDHGSNLK----------TGCREGMEAFFNWEG 732
            ++++  A+  LP   + +  GGA  E+TL+ NVE    +  R RIL ++S + L TT+ + K+S P+ +AP     +    GEV  A+AA +      LS  S   IEEVA +     ++QLYVL+ R      ++RA+  G   LV T D P  G R  D  + M  P     + L+ +  P+   D G N +           G   G+E +  W G
Sbjct:    7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLG 225
[Close]
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_ECOLI (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain K12) GN=lldD PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.796e-22
Identity = 68/219 (31.05%), Postives = 104/219 (47.49%), Query Frame = 1 
Query:  115 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINPQL---KNLEGLLSPKVTSDHGSNLK----------TGCREGMEAFFNWEG 732
            ++++  A+  LP   + +  GGA  E+TL+ NVE    +  R RIL ++S + L TT+ + K+S P+ +AP     +    GEV  A+AA +      LS  S   IEEVA +     ++QLYVL+ R      ++RA+  G   LV T D P  G R  D  + M  P     + L+ +  P+   D G N +           G   G+E +  W G
Sbjct:    7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLG 225
[Close]
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_ECOLC (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=lldD PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.796e-22
Identity = 68/219 (31.05%), Postives = 104/219 (47.49%), Query Frame = 1 
Query:  115 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINPQL---KNLEGLLSPKVTSDHGSNLK----------TGCREGMEAFFNWEG 732
            ++++  A+  LP   + +  GGA  E+TL+ NVE    +  R RIL ++S + L TT+ + K+S P+ +AP     +    GEV  A+AA +      LS  S   IEEVA +     ++QLYVL+ R      ++RA+  G   LV T D P  G R  D  + M  P     + L+ +  P+   D G N +           G   G+E +  W G
Sbjct:    7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLG 225
[Close]
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_ECOHS (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O9:H4 (strain HS) GN=lldD PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.796e-22
Identity = 68/219 (31.05%), Postives = 104/219 (47.49%), Query Frame = 1 
Query:  115 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINPQL---KNLEGLLSPKVTSDHGSNLK----------TGCREGMEAFFNWEG 732
            ++++  A+  LP   + +  GGA  E+TL+ NVE    +  R RIL ++S + L TT+ + K+S P+ +AP     +    GEV  A+AA +      LS  S   IEEVA +     ++QLYVL+ R      ++RA+  G   LV T D P  G R  D  + M  P     + L+ +  P+   D G N +           G   G+E +  W G
Sbjct:    7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLG 225
The following BLAST results are available for this feature:
BLAST of EY665760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
LLDD_SHIF86.796e-2231.05L-lactate dehydrogenase [cytochrome] OS=Shigella f... [more]
LLDD_SHIDS6.796e-2231.05L-lactate dehydrogenase [cytochrome] OS=Shigella d... [more]
LLDD_SHIBS6.796e-2231.05L-lactate dehydrogenase [cytochrome] OS=Shigella b... [more]
LLDD_SHIB36.796e-2231.05L-lactate dehydrogenase [cytochrome] OS=Shigella b... [more]
LLDD_ECOSM6.796e-2231.05L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOSE6.796e-2231.05L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOLU6.796e-2231.05L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOLI6.796e-2231.05L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOLC6.796e-2231.05L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOHS6.796e-2231.05L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665760 ID=EY665760; Name=EY665760; organism=Citrus sinensis; type=EST; length=869bp
CTTGACTTTGACTCTGCCGCCTATTCACTGTTGTAATCTGCTTCACGATC
GACCTTCATCAGTTGAAATTTTTAGTCATTCGGGTTTCAAATGGCAGCTG
AACCTGTTAATTTGAATGAGTTCCAAGAATTGGCAAGGCTGGCCCTTCCA
AAAATGTATTATGATTTCTACGCTGGTGGAGCAGAAGATGAACATACCCT
AAAAGAGAATGTGGAAGCCTTTCATAGAATTACGTTTCGGCCAAGAATTC
TTGTCGATGTCAGCAGAATAGATTTATCGACTACTATACTTGATTACAAA
ATCTCGGCTCCCATTATCATTGCTCCAACGGCTTGGCATAAGCTTGCAAA
CCCTGAAGGAGAGGTAGCCACAGCCAGAGCAGCAGCTTCATGTAACACCA
TAATGGTTTTATCCTTCACATCTAGCAGCTCCATAGAGGAGGTTGCGGCC
AGCTGCAATGCTGTTTGCTTCTATCAATTATATGTATTAAAGAAACGAGA
TATAGCAGCTACTCTAGTGCAGAGAGCTGAAAGGAATGGTTTTAAGGCTC
TTGTCCTAACTGCTGATGCTCCAAGACTTGGTAAAAGGGAGGAAGATATA
AAGAACAAAATGATTAACCCGCAGTTGAAAAATTTGGAAGGCCTCTTATC
ACCCAAAGTCACTTCTGATCACGGGTCAAATTTAAAAACTGGATGCCGGG
AAGGCATGGAAGCTTTTTTTAATTGGGAAGGATTTAAAAGGTTAAAAATA
TTTAAAACATTCCCCATTTTTATCAAGGGGGAAATTAAACCTTGAAAAAG
CAAAAAAAAGGTGGGGAAAAAAGGGTGTGGTGGGGATTTATTTCCCCCAC
ACCCCGGGAGCCCCAACAA
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