EY665760

Overview
NameEY665760
Unique NameEY665760
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_PSEPG (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas putida (strain GB-1) GN=lldD PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.159e-21
Identity = 65/189 (34.39%), Postives = 95/189 (50.26%), Query Frame = 1
Query:  118 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMI---NPQLKNLEGLLSPKVTSDHG 675
            +++  A+  LP   + +  GGA  EHTL+ NV     I  R R+L ++S + LST + D  +S P+ +AP     +    GEV  ARAAA+      +S  S   IEEVA + +   ++QLYVLK R      ++RA+  G K LV T D P  G R  D  + M     P  + L+ +  P+   D G
Sbjct:    8 DYRAAAQRKLPPFLFHYADGGAYAEHTLRHNVSDLASIALRQRVLNNMSELSLSTRLFDETLSMPVALAPVGLTGMYARRGEVQAARAAAAHGIPFTMSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKAAGVKTLVFTVDMPVPGARYRDAHSGMSGKNGPLRRVLQAMTHPEWAWDVG 196          
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_PSEP1 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=lldD PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.159e-21
Identity = 65/189 (34.39%), Postives = 94/189 (49.74%), Query Frame = 1
Query:  118 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMI---NPQLKNLEGLLSPKVTSDHG 675
            +++  A+  LP   + +  GGA  EHTL+ NV     I  R R+L ++S + L T + D  +S P+ +AP     +    GEV  ARAAA+      +S  S   IEEVA + N   ++QLYVLK R      ++RA+  G K LV T D P  G R  D  + M     P  + L+ +  P+   D G
Sbjct:    8 DYRAAAQRKLPPFLFHYADGGAYAEHTLRHNVSDLAGIALRQRVLNNMSELSLETKLFDETLSMPVALAPVGLTGMYARRGEVQAARAAAAHGIPFTMSTVSVCPIEEVAPAINRPMWFQLYVLKDRGFMRNALERAKAAGVKTLVFTVDMPVPGARYRDAHSGMSGKNGPLRRVLQAMTHPEWAWDVG 196          
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_PSEPW (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas putida (strain W619) GN=lldD PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.977e-21
Identity = 64/189 (33.86%), Postives = 94/189 (49.74%), Query Frame = 1
Query:  118 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMI---NPQLKNLEGLLSPKVTSDHG 675
            +++  A+  LP   + +  GGA  EHTL+ NV     I  R R+L ++S + L T + D  +S P+ +AP     +    GEV  ARAAA+      +S  S   IEEVA + +   ++QLYVLK R      ++RA+  G K LV T D P  G R  D  + M     P  + L+ +  P+   D G
Sbjct:    8 DYRAAAQRKLPPFLFHYADGGAYAEHTLRHNVSDLAGIALRQRVLKNMSELSLETRLFDETLSMPVALAPVGLTGMYARRGEVQAARAAAAHGIPFTMSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKAAGVKTLVFTVDMPVPGARYRDAHSGMSGANGPMRRVLQAMTHPEWAWDVG 196          
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_ECOL6 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O6 GN=lldD PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.977e-21
Identity = 67/219 (30.59%), Postives = 103/219 (47.03%), Query Frame = 1
Query:  115 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINPQL---KNLEGLLSPKVTSDHGSNLK----------TGCREGMEAFFNWEG 732
            ++++  A+  LP   + +  GGA  E+TL+ NVE    +  R RIL ++S + L TT+ + K+S P+ + P     +    GEV  A+AA +      LS  S   IEEVA +     ++QLYVL+ R      ++RA+  G   LV T D P  G R  D  + M  P     + L+ +  P+   D G N +           G   G+E +  W G
Sbjct:    7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLG 225          
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_ECOL5 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.977e-21
Identity = 67/219 (30.59%), Postives = 103/219 (47.03%), Query Frame = 1
Query:  115 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINPQL---KNLEGLLSPKVTSDHGSNLK----------TGCREGMEAFFNWEG 732
            ++++  A+  LP   + +  GGA  E+TL+ NVE    +  R RIL ++S + L TT+ + K+S P+ + P     +    GEV  A+AA +      LS  S   IEEVA +     ++QLYVL+ R      ++RA+  G   LV T D P  G R  D  + M  P     + L+ +  P+   D G N +           G   G+E +  W G
Sbjct:    7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLG 225          
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_ECO81 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O81 (strain ED1a) GN=lldD PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.977e-21
Identity = 67/219 (30.59%), Postives = 103/219 (47.03%), Query Frame = 1
Query:  115 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINPQL---KNLEGLLSPKVTSDHGSNLK----------TGCREGMEAFFNWEG 732
            ++++  A+  LP   + +  GGA  E+TL+ NVE    +  R RIL ++S + L TT+ + K+S P+ + P     +    GEV  A+AA +      LS  S   IEEVA +     ++QLYVL+ R      ++RA+  G   LV T D P  G R  D  + M  P     + L+ +  P+   D G N +           G   G+E +  W G
Sbjct:    7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLG 225          
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_ECO7I (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.977e-21
Identity = 67/219 (30.59%), Postives = 103/219 (47.03%), Query Frame = 1
Query:  115 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINPQL---KNLEGLLSPKVTSDHGSNLK----------TGCREGMEAFFNWEG 732
            ++++  A+  LP   + +  GGA  E+TL+ NVE    +  R RIL ++S + L TT+ + K+S P+ + P     +    GEV  A+AA +      LS  S   IEEVA +     ++QLYVL+ R      ++RA+  G   LV T D P  G R  D  + M  P     + L+ +  P+   D G N +           G   G+E +  W G
Sbjct:    7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLG 225          
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_CAUCR (L-lactate dehydrogenase [cytochrome] OS=Caulobacter crescentus GN=lldD PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.977e-21
Identity = 60/168 (35.71%), Postives = 86/168 (51.19%), Query Frame = 1
Query:  118 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINP 621
            +F+E AR  LP+  +D+  GGA  E T+  N++    I  R R+L+DVS +D STT+   + + P+ +AP     +    GE   ARAAA+      LS  S   ++EV A+     ++QLYVL+ R     L+ RA   G   LV T D P  G R  D  + M  P
Sbjct:    8 DFREAARRRLPRFLFDYIDGGAYAERTMARNIDDLADIALRQRVLMDVSVVDPSTTLFGVRQALPVALAPVGLTGMYARRGECQAARAAAAKGVPFCLSTVSVCDVDEVRAASATPFWFQLYVLRDRGFMRDLLARASAAGATTLVFTVDMPVPGARYRDAHSGMSGP 175          
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_CAUCN (L-lactate dehydrogenase [cytochrome] OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=lldD PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.977e-21
Identity = 60/168 (35.71%), Postives = 86/168 (51.19%), Query Frame = 1
Query:  118 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINP 621
            +F+E AR  LP+  +D+  GGA  E T+  N++    I  R R+L+DVS +D STT+   + + P+ +AP     +    GE   ARAAA+      LS  S   ++EV A+     ++QLYVL+ R     L+ RA   G   LV T D P  G R  D  + M  P
Sbjct:    8 DFREAARRRLPRFLFDYIDGGAYAERTMARNIDDLADIALRQRVLMDVSVVDPSTTLFGVRQALPVALAPVGLTGMYARRGECQAARAAAAKGVPFCLSTVSVCDVDEVRAASATPFWFQLYVLRDRGFMRDLLARASAAGATTLVFTVDMPVPGARYRDAHSGMSGP 175          
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_XANCP (L-lactate dehydrogenase [cytochrome] OS=Xanthomonas campestris pv. campestris GN=lldD PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.582e-21
Identity = 68/217 (31.34%), Postives = 102/217 (47.00%), Query Frame = 1
Query:  115 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINPQL---KNLEGLLSPKVTSDHG--------SNLKT--GCREGMEAFFNW 726
            ++++  A   LP   + +  GGA  EHTL+ NV     I  R R+L ++S + LST +    ++ P+ +AP     +    GEV  ARAAA+      LS  S   IEEVA + +   ++QLYVLK R      ++RA+  G   LV T D P  G R  D  + M  P     + L+ +  P+   D G         N+ T  G   G++ +  W
Sbjct:    7 SDYRAAAEARLPPFLFHYIDGGAYAEHTLRRNVSDLADIALRQRVLRNMSDLSLSTELFGETLAMPVALAPVGLTGMYARRGEVQAARAAAARGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKTAGVTTLVFTVDMPTPGARYRDAHSGMSGPNASLRRMLQAMTHPRWAWDVGLLGKPHDLGNISTYRGSPTGLQDYIGW 223          
The following BLAST results are available for this feature:
BLAST of EY665760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
LLDD_PSEPG1.159e-2134.39L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_PSEP11.159e-2134.39L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_PSEPW1.977e-2133.86L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_ECOL61.977e-2130.59L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOL51.977e-2130.59L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECO811.977e-2130.59L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECO7I1.977e-2130.59L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_CAUCR1.977e-2135.71L-lactate dehydrogenase [cytochrome] OS=Caulobacte... [more]
LLDD_CAUCN1.977e-2135.71L-lactate dehydrogenase [cytochrome] OS=Caulobacte... [more]
LLDD_XANCP2.582e-2131.34L-lactate dehydrogenase [cytochrome] OS=Xanthomona... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665760 ID=EY665760; Name=EY665760; organism=Citrus sinensis; type=EST; length=869bp
CTTGACTTTGACTCTGCCGCCTATTCACTGTTGTAATCTGCTTCACGATC
GACCTTCATCAGTTGAAATTTTTAGTCATTCGGGTTTCAAATGGCAGCTG
AACCTGTTAATTTGAATGAGTTCCAAGAATTGGCAAGGCTGGCCCTTCCA
AAAATGTATTATGATTTCTACGCTGGTGGAGCAGAAGATGAACATACCCT
AAAAGAGAATGTGGAAGCCTTTCATAGAATTACGTTTCGGCCAAGAATTC
TTGTCGATGTCAGCAGAATAGATTTATCGACTACTATACTTGATTACAAA
ATCTCGGCTCCCATTATCATTGCTCCAACGGCTTGGCATAAGCTTGCAAA
CCCTGAAGGAGAGGTAGCCACAGCCAGAGCAGCAGCTTCATGTAACACCA
TAATGGTTTTATCCTTCACATCTAGCAGCTCCATAGAGGAGGTTGCGGCC
AGCTGCAATGCTGTTTGCTTCTATCAATTATATGTATTAAAGAAACGAGA
TATAGCAGCTACTCTAGTGCAGAGAGCTGAAAGGAATGGTTTTAAGGCTC
TTGTCCTAACTGCTGATGCTCCAAGACTTGGTAAAAGGGAGGAAGATATA
AAGAACAAAATGATTAACCCGCAGTTGAAAAATTTGGAAGGCCTCTTATC
ACCCAAAGTCACTTCTGATCACGGGTCAAATTTAAAAACTGGATGCCGGG
AAGGCATGGAAGCTTTTTTTAATTGGGAAGGATTTAAAAGGTTAAAAATA
TTTAAAACATTCCCCATTTTTATCAAGGGGGAAATTAAACCTTGAAAAAG
CAAAAAAAAGGTGGGGAAAAAAGGGTGTGGTGGGGATTTATTTCCCCCAC
ACCCCGGGAGCCCCAACAA
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