EY665760

Overview
NameEY665760
Unique NameEY665760
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_HAEIE (L-lactate dehydrogenase [cytochrome] OS=Haemophilus influenzae (strain PittEE) GN=lldD PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.282e-20
Identity = 69/217 (31.80%), Postives = 101/217 (46.54%), Query Frame = 1
Query:  115 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINPQ---LKNLEGLLSPKVTSDHG--------SNLKT--GCREGMEAFFNW 726
            ++++E AR  +P   + +  GG+  E TL  NV     I  R R+L D+S +D S  +   K+S P I+AP     +    GEV  A+AA +      LS  S   IEEVA +     ++QLYVLK R      ++RA+  G   LV T D P  G R  D+ + M  P     + L+G   P    D G         N+ T  G + G++ +  W
Sbjct:    7 SDYREAARRRVPPFMFHYADGGSYAEQTLARNVSDLENIALRQRVLKDMSELDTSIELFGEKLSMPTILAPVGACGMYARRGEVQAAQAADNKGVPFTLSTVSICPIEEVAPAIKRPMWFQLYVLKDRGFMKNALERAKAAGCSTLVFTVDMPTPGARYRDMHSGMSGPYKEIRRVLQGFTHPFWAYDVGIKGKPHTLGNVSTYMGRQIGLDDYIGW 223          
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_HAEI8 (L-lactate dehydrogenase [cytochrome] OS=Haemophilus influenzae (strain 86-028NP) GN=lldD PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.282e-20
Identity = 69/217 (31.80%), Postives = 101/217 (46.54%), Query Frame = 1
Query:  115 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINPQ---LKNLEGLLSPKVTSDHG--------SNLKT--GCREGMEAFFNW 726
            ++++E AR  +P   + +  GG+  E TL  NV     I  R R+L D+S +D S  +   K+S P I+AP     +    GEV  A+AA +      LS  S   IEEVA +     ++QLYVLK R      ++RA+  G   LV T D P  G R  D+ + M  P     + L+G   P    D G         N+ T  G + G++ +  W
Sbjct:    7 SDYREAARRRVPPFMFHYADGGSYAEQTLARNVSDLENIALRQRVLKDMSELDTSIELFGEKLSMPTILAPVGACGMYARRGEVQAAQAADNKGVPFTLSTVSICPIEEVAPAIKRPMWFQLYVLKDRGFMKNALERAKAAGCSTLVFTVDMPTPGARYRDMHSGMSGPYKEIRRVLQGFTHPFWAYDVGIKGKPHTLGNVSTYMGRQIGLDDYIGW 223          
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_ALCFA (L-lactate dehydrogenase [cytochrome] OS=Alcaligenes faecalis GN=lldD PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.282e-20
Identity = 57/168 (33.93%), Postives = 85/168 (50.60%), Query Frame = 1
Query:  118 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINP 621
            +++  A+  LP   + +  GGA  EHTL+ NV+    +  R R+L D+S++D S  +   K+S P+ ++P     +    GEV  ARAA +      +S  S   IEEVA   +   ++QLYVLK R      ++RA+  G   LV T D P  G R  D  + M  P
Sbjct:    8 DYRRAAQKRLPPFLFHYIDGGAYAEHTLRRNVDDLAEVALRQRVLKDMSQLDTSIDLFGEKLSMPVALSPVGLTGMYARRGEVQAARAADARGIPFTMSSVSVCPIEEVAPRLSRPMWFQLYVLKDRGFMRNALERAQAAGCSTLVFTVDMPVPGARYRDAHSGMSGP 175          
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_XANAC (L-lactate dehydrogenase [cytochrome] OS=Xanthomonas axonopodis pv. citri GN=lldD PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.674e-20
Identity = 67/219 (30.59%), Postives = 101/219 (46.12%), Query Frame = 1
Query:  115 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINPQL---KNLEGLLSPKVTSDHG--------SNLKT--GCREGMEAFFNWEG 732
            ++++  A   LP   + +  GGA  EHTL+ NV     +  R R+L ++S + LST +    ++ P+ +AP     +    GEV  ARAAA+      LS  S   IEEVA +     ++QLYVLK R      ++RA+  G   LV T D P  G R  D  + M  P     + L+ +  P+   D G         N+    G   G++ +  W G
Sbjct:    7 SDYRAAAEARLPPFLFHYIDGGAYAEHTLRRNVSDLADVALRQRVLRNMSDLRLSTELFGETLAMPVALAPVGLTGMYARRGEVQAARAAAARGIPFTLSTVSVCPIEEVAPAIERPMWFQLYVLKDRGFMRNALERAKAAGVTTLVFTVDMPTPGARYRDAHSGMSGPNASLRRMLQAVTHPRWAWDVGLLGKPHDLGNISAYRGSPTGLQDYIGWLG 225          
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_SALTY (L-lactate dehydrogenase [cytochrome] OS=Salmonella typhimurium GN=lldD PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.674e-20
Identity = 65/217 (29.95%), Postives = 102/217 (47.00%), Query Frame = 1
Query:  115 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINPQL---KNLEGLLSPKVTSDHGSNLK----------TGCREGMEAFFNW 726
            ++++  A+  LP   + +  GGA  E+TL+ NVE   ++  R R+L ++S + L TT+ +  +S P+ +AP     +    GEV  A AA +      LS  S   IEEVA +     ++QLYVL+ R      ++RA+  G   LV T D P  G R  D  + M  P     +  + ++ PK   D G N +           G   G+E +  W
Sbjct:    7 SDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGW 223          
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_SALTI (L-lactate dehydrogenase [cytochrome] OS=Salmonella typhi GN=lldD PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.674e-20
Identity = 65/217 (29.95%), Postives = 102/217 (47.00%), Query Frame = 1
Query:  115 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINPQL---KNLEGLLSPKVTSDHGSNLK----------TGCREGMEAFFNW 726
            ++++  A+  LP   + +  GGA  E+TL+ NVE   ++  R R+L ++S + L TT+ +  +S P+ +AP     +    GEV  A AA +      LS  S   IEEVA +     ++QLYVL+ R      ++RA+  G   LV T D P  G R  D  + M  P     +  + ++ PK   D G N +           G   G+E +  W
Sbjct:    7 SDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTLKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGW 223          
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_SALSV (L-lactate dehydrogenase [cytochrome] OS=Salmonella schwarzengrund (strain CVM19633) GN=lldD PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.674e-20
Identity = 65/217 (29.95%), Postives = 102/217 (47.00%), Query Frame = 1
Query:  115 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINPQL---KNLEGLLSPKVTSDHGSNLK----------TGCREGMEAFFNW 726
            ++++  A+  LP   + +  GGA  E+TL+ NVE   ++  R R+L ++S + L TT+ +  +S P+ +AP     +    GEV  A AA +      LS  S   IEEVA +     ++QLYVL+ R      ++RA+  G   LV T D P  G R  D  + M  P     +  + ++ PK   D G N +           G   G+E +  W
Sbjct:    7 SDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTLKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGW 223          
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_SALPK (L-lactate dehydrogenase [cytochrome] OS=Salmonella paratyphi A (strain AKU_12601) GN=lldD PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.674e-20
Identity = 65/217 (29.95%), Postives = 102/217 (47.00%), Query Frame = 1
Query:  115 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINPQL---KNLEGLLSPKVTSDHGSNLK----------TGCREGMEAFFNW 726
            ++++  A+  LP   + +  GGA  E+TL+ NVE   ++  R R+L ++S + L TT+ +  +S P+ +AP     +    GEV  A AA +      LS  S   IEEVA +     ++QLYVL+ R      ++RA+  G   LV T D P  G R  D  + M  P     +  + ++ PK   D G N +           G   G+E +  W
Sbjct:    7 SDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIQRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGW 223          
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_SALPC (L-lactate dehydrogenase [cytochrome] OS=Salmonella paratyphi C (strain RKS4594) GN=lldD PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.674e-20
Identity = 65/217 (29.95%), Postives = 102/217 (47.00%), Query Frame = 1
Query:  115 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINPQL---KNLEGLLSPKVTSDHGSNLK----------TGCREGMEAFFNW 726
            ++++  A+  LP   + +  GGA  E+TL+ NVE   ++  R R+L ++S + L TT+ +  +S P+ +AP     +    GEV  A AA +      LS  S   IEEVA +     ++QLYVL+ R      ++RA+  G   LV T D P  G R  D  + M  P     +  + ++ PK   D G N +           G   G+E +  W
Sbjct:    7 SDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIQRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGW 223          
BLAST of EY665760 vs. ExPASy Swiss-Prot
Match: LLDD_SALPB (L-lactate dehydrogenase [cytochrome] OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=lldD PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.674e-20
Identity = 65/217 (29.95%), Postives = 102/217 (47.00%), Query Frame = 1
Query:  115 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAWHKLANPEGEVATARAAASCNTIMVLSFTSSSSIEEVAASCNAVCFYQLYVLKKRDIAATLVQRAERNGFKALVLTADAPRLGKREEDIKNKMINPQL---KNLEGLLSPKVTSDHGSNLK----------TGCREGMEAFFNW 726
            ++++  A+  LP   + +  GGA  E+TL+ NVE   ++  R R+L ++S + L TT+ +  +S P+ +AP     +    GEV  A AA +      LS  S   IEEVA +     ++QLYVL+ R      ++RA+  G   LV T D P  G R  D  + M  P     +  + ++ PK   D G N +           G   G+E +  W
Sbjct:    7 SDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGW 223          
The following BLAST results are available for this feature:
BLAST of EY665760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
LLDD_HAEIE1.282e-2031.80L-lactate dehydrogenase [cytochrome] OS=Haemophilu... [more]
LLDD_HAEI81.282e-2031.80L-lactate dehydrogenase [cytochrome] OS=Haemophilu... [more]
LLDD_ALCFA1.282e-2033.93L-lactate dehydrogenase [cytochrome] OS=Alcaligene... [more]
LLDD_XANAC1.674e-2030.59L-lactate dehydrogenase [cytochrome] OS=Xanthomona... [more]
LLDD_SALTY1.674e-2029.95L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALTI1.674e-2029.95L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALSV1.674e-2029.95L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALPK1.674e-2029.95L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALPC1.674e-2029.95L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALPB1.674e-2029.95L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665760 ID=EY665760; Name=EY665760; organism=Citrus sinensis; type=EST; length=869bp
CTTGACTTTGACTCTGCCGCCTATTCACTGTTGTAATCTGCTTCACGATC
GACCTTCATCAGTTGAAATTTTTAGTCATTCGGGTTTCAAATGGCAGCTG
AACCTGTTAATTTGAATGAGTTCCAAGAATTGGCAAGGCTGGCCCTTCCA
AAAATGTATTATGATTTCTACGCTGGTGGAGCAGAAGATGAACATACCCT
AAAAGAGAATGTGGAAGCCTTTCATAGAATTACGTTTCGGCCAAGAATTC
TTGTCGATGTCAGCAGAATAGATTTATCGACTACTATACTTGATTACAAA
ATCTCGGCTCCCATTATCATTGCTCCAACGGCTTGGCATAAGCTTGCAAA
CCCTGAAGGAGAGGTAGCCACAGCCAGAGCAGCAGCTTCATGTAACACCA
TAATGGTTTTATCCTTCACATCTAGCAGCTCCATAGAGGAGGTTGCGGCC
AGCTGCAATGCTGTTTGCTTCTATCAATTATATGTATTAAAGAAACGAGA
TATAGCAGCTACTCTAGTGCAGAGAGCTGAAAGGAATGGTTTTAAGGCTC
TTGTCCTAACTGCTGATGCTCCAAGACTTGGTAAAAGGGAGGAAGATATA
AAGAACAAAATGATTAACCCGCAGTTGAAAAATTTGGAAGGCCTCTTATC
ACCCAAAGTCACTTCTGATCACGGGTCAAATTTAAAAACTGGATGCCGGG
AAGGCATGGAAGCTTTTTTTAATTGGGAAGGATTTAAAAGGTTAAAAATA
TTTAAAACATTCCCCATTTTTATCAAGGGGGAAATTAAACCTTGAAAAAG
CAAAAAAAAGGTGGGGAAAAAAGGGTGTGGTGGGGATTTATTTCCCCCAC
ACCCCGGGAGCCCCAACAA
back to top