CX674980

Overview
NameCX674980
Unique NameCX674980
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: FABG_STAAN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain N315) GN=fabG PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.256e-22
Identity = 68/197 (34.52%), Postives = 104/197 (52.79%), Query Frame = 1
Query:  232 DTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALA---HLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            D+F    +V   ++V + +   V +FG+LD++VNNAGI+      +      E++ V D N+KGVF+ ++ A   M+ Q  G II++ SV GA+G  G   Y  +K  V+GL K+ A EL   GI VN V+P  + + +  A    L E+  T+  +  F                  D+AN V FLASD+A+YI+G
Sbjct:   55 DSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQ--------------DTDIANTVAFLASDKAKYITG 235          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: FABG_STAAM (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=fabG PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.256e-22
Identity = 68/197 (34.52%), Postives = 104/197 (52.79%), Query Frame = 1
Query:  232 DTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALA---HLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            D+F    +V   ++V + +   V +FG+LD++VNNAGI+      +      E++ V D N+KGVF+ ++ A   M+ Q  G II++ SV GA+G  G   Y  +K  V+GL K+ A EL   GI VN V+P  + + +  A    L E+  T+  +  F                  D+AN V FLASD+A+YI+G
Sbjct:   55 DSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQ--------------DTDIANTVAFLASDKAKYITG 235          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: FABG_STAAC (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain COL) GN=fabG PE=3 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.256e-22
Identity = 68/197 (34.52%), Postives = 104/197 (52.79%), Query Frame = 1
Query:  232 DTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALA---HLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            D+F    +V   ++V + +   V +FG+LD++VNNAGI+      +      E++ V D N+KGVF+ ++ A   M+ Q  G II++ SV GA+G  G   Y  +K  V+GL K+ A EL   GI VN V+P  + + +  A    L E+  T+  +  F                  D+AN V FLASD+A+YI+G
Sbjct:   55 DSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQ--------------DTDIANTVAFLASDKAKYITG 235          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: BACC_BACAM (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus amyloliquefaciens GN=bacC PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.640e-22
Identity = 77/232 (33.19%), Postives = 120/232 (51.72%), Query Frame = 1
Query:  130 STVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAE-LGKYGIRVNCVSPYAVATGL-ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGT 816
            + V+ F    A V +AD+ +  G+ + +    +    F   D+T E    +A+   V+KFG LD+++NNAGI   AP   I E +LS++ KV ++N+ G+F   KHA + M+   KG II+ CSV G +      AY  SK  VL  +       + K+ IRVNCV P  + T L   + L   E T + +   +  V     +   E    ++AN +LFLASD + Y++G+
Sbjct:   20 AAVQAFLNQQANVVVADIDEAQGEAMIRKENNDR-LHFVQTDITNEPACQNAILSAVDKFGGLDVLINNAGIEIVAP---IHEMELSDWNKVLNVNLTGMFLMSKHALKYMLKSGKGNIINTCSVGGVVAWPDIPAYNASKGGVLQTDAFYRPSIIAKHNIRVNCVCPGIIDTPLNEKSFLENNEGTLEEIKKEKAKVNPLLRLGKPE----EIANVMLFLASDLSSYMTGS 243          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: YGCW_ECOLI (Uncharacterized oxidoreductase ygcW OS=Escherichia coli (strain K12) GN=ygcW PE=3 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 8.141e-22
Identity = 72/223 (32.29%), Postives = 111/223 (49.78%), Query Frame = 1
Query:  151 KHGAKVCIADVQDNLGQ--QVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            K GA + I     + G+  ++ +  G E D  F    +T E      +    E+FGT+DI+VNNAGI       + +   ++++ + D+N+   F     AA+IMIPQ  G II+ICS+   +GG    AY+ +KHA+ G  K    ELG+Y I+VN ++P   AT + LA     E  +  +          AN  G      D+  A +FLAS  + Y++G
Sbjct:   40 KAGANIFIPSFVKDNGETKEMIEKQGVEVD--FMQVGITAEGAPQKIIAACCERFGTVDILVNNAGI--CKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHI------PANRWG---DTQDLMGAAVFLASPASNYVNG 249          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: DHB14_BOVIN (17-beta-hydroxysteroid dehydrogenase 14 OS=Bos taurus GN=HSD17B14 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.141e-22
Identity = 83/230 (36.09%), Postives = 119/230 (51.74%), Query Frame = 1
Query:  136 VRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAP-CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGL--ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGT 816
            VR F + GA+V I D  +  G+ V + L   P T F  CDVT+EEDV + V  T+ +FG LD +VNNAG    P  P+  E     F ++ ++N+ G +   K A    + +++G +I+I S+ GAIG      Y  +K AV  + K +A +  +YG+RVNC+SP  + T L   LA       T D     R      A   G      +VA A +FLAS EA + +GT
Sbjct:   26 VRAFVESGAQVVICDKDEARGRAVEREL---PGTVFLLCDVTREEDVRTLVSETIRRFGRLDCIVNNAGYHPPPQWPE--ETSAQGFRQLLELNLLGTYTLTKLALP-HLRKSRGNVINISSLVGAIGQSQAVPYVATKGAVTAMTKALALDESQYGVRVNCISPGNIWTPLWEELA-----ASTPDPTATIRE--GTLAQPLGRMGQPAEVAAAAVFLAS-EATFCTGT 241          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: HDHA_ECOLI (7-alpha-hydroxysteroid dehydrogenase OS=Escherichia coli (strain K12) GN=hdhA PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.063e-21
Identity = 73/227 (32.16%), Postives = 111/227 (48.90%), Query Frame = 1
Query:  145 FHKHGAKVCIADVQDNLGQQVC---QSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVAT-GLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            F   GA V ++D+  +    V    Q LGG+   F C CD+T E+++ +  D  + K G +DI+VNNAG  G P P   +  +++F + +++NV   FH  +  A  M     G I++I S+A     +   +Y  SK A   L +N+A +LG+  IRVN ++P A+ T  L     PE E+        R                 D+ANA LFL S  A ++SG
Sbjct:   31 FATAGASVVVSDINADAANHVVDEIQQLGGQ--AFACRCDITSEQELSALADFAISKLGKVDILVNNAG-GGGPKPF--DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLG-----------QPQDIANAALFLCSPAASWVSG 241          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: HDHA_ECO57 (7-alpha-hydroxysteroid dehydrogenase OS=Escherichia coli O157:H7 GN=hdhA PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.063e-21
Identity = 73/227 (32.16%), Postives = 111/227 (48.90%), Query Frame = 1
Query:  145 FHKHGAKVCIADVQDNLGQQVC---QSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVAT-GLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            F   GA V ++D+  +    V    Q LGG+   F C CD+T E+++ +  D  + K G +DI+VNNAG  G P P   +  +++F + +++NV   FH  +  A  M     G I++I S+A     +   +Y  SK A   L +N+A +LG+  IRVN ++P A+ T  L     PE E+        R                 D+ANA LFL S  A ++SG
Sbjct:   31 FATAGASVVVSDINADAANHVVDEIQQLGGQ--AFACRCDITSEQELSALADFAISKLGKVDILVNNAG-GGGPKPF--DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLG-----------QPQDIANAALFLCSPAASWVSG 241          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: HSD_STREX (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Streptomyces exfoliatus PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.389e-21
Identity = 80/220 (36.36%), Postives = 107/220 (48.64%), Query Frame = 1
Query:  157 GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNF-VARNANMQGTELTANDVANAVLFLASDEARYISG 813
            GA+V +ADV D  G    + LG      + H DVT EED    V    E+FG++D +VNNAGIS      +    +  F KV DIN+ GVF GMK     M     G+I++I S AG +G     +Y  SK  V GL+K  A ELG   IRVN V P     G+    +  E         + N  + R  N  G      ++A AV+ L SD + Y++G
Sbjct:   30 GARVVLADVLDEEGAATARELGDAAR--YQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMF--LETESVERFRKVVDINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHP-----GMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPG------EIAGAVVKLLSDTSSYVTG 234          
BLAST of CX674980 vs. ExPASy Swiss-Prot
Match: FABG_CHLMU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia muridarum GN=fabG PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.040e-21
Identity = 66/227 (29.07%), Postives = 113/227 (49.78%), Query Frame = 1
Query:  139 RLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDT--FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 813
            +LF +HGA V I  + +  G+   Q L  +  +   F   DV+K + V + V   + ++GT+D++VNNAGI+      +      E+  V D N+  +++      R MI    G I++I S+ G  G  G   Y  +K  ++G +K ++ E+G   IRVNC++P  + T          + T+      +N   +   + G   T  ++A A LFLAS+++ YI+G
Sbjct:   25 KLFAEHGANVQIWGINEEAGKSAAQDLSDKTGSKVSFALVDVSKNDMVSAQVQKFLAEYGTIDVVVNNAGITRDSL--LMRMSEEEWSSVIDTNLGSIYNVCSAVIRPMIKARSGAIVNISSIVGLRGSPGQTNYAAAKAGIIGFSKALSKEVGSKNIRVNCIAPGFIDT----------DMTKGLSDNLKNEWLKGVPL-GRVGTPEEIAMAALFLASNQSSYITG 238          
The following BLAST results are available for this feature:
BLAST of CX674980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
FABG_STAAN1.256e-2234.523-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAM1.256e-2234.523-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAC1.256e-2234.523-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
BACC_BACAM1.640e-2233.19Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
YGCW_ECOLI8.141e-2232.29Uncharacterized oxidoreductase ygcW OS=Escherichia... [more]
DHB14_BOVIN8.141e-2236.0917-beta-hydroxysteroid dehydrogenase 14 OS=Bos tau... [more]
HDHA_ECOLI1.063e-2132.167-alpha-hydroxysteroid dehydrogenase OS=Escherichi... [more]
HDHA_ECO571.063e-2132.167-alpha-hydroxysteroid dehydrogenase OS=Escherichi... [more]
HSD_STREX1.389e-2136.363-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]
FABG_CHLMU4.040e-2129.073-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_9H02_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-9H02-O3-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674980 ID=CX674980; Name=CX674980; organism=Citrus sinensis; type=EST; length=820bp
GGCAATAGTTTTATTGTGTGAAATGTTCTACGTCTTCCTAAATGGCCTTA
GACGTGTTTTCTTTTCCTAACATTTTGTTGGTATAATTATTTTGTTTTAC
TTATTGTTTTAATAATTTAGATGGTTATGAGCACTGTACGCCTATTCCAC
AAGCATGGTGCAAAAGTTTGCATTGCAGATGTGCAAGACAATCTTGGTCA
GCAGGTCTGTCAATCCCTTGGTGGTGAGCCAGACACTTTTTTTTGCCATT
GTGATGTCACAAAGGAGGAAGATGTTTGCTCTGCTGTTGACCTCACAGTC
GAAAAATTTGGCACACTTGATATCATGGTCAATAATGCTGGCATTTCAGG
GGCTCCTTGTCCTGACATCCGTGAGGCGGACTTATCAGAGTTTGAGAAGG
TATTTGACATAAATGTGAAGGGAGTTTTCCATGGAATGAAGCATGCAGCT
CGGATCATGATCCCACAAACTAAGGGCACTATCATATCAATCTGCAGTGT
TGCAGGTGCCATTGGTGGTCTTGGCCCACATGCCTATACGGGGTCCAAGC
ATGCCGTTTTGGGACTCAACAAGAATGTTGCCGCTGAGCTTGGAAAATAT
GGCATCCGCGTGAACTGTGTTTCTCCTTATGCTGTTGCAACAGGCTTGGC
TTTGGCTCACTTGCCTGAAGAGGAGAGGACAGAGGATGCCATGGTAGGTT
TCCGTAATTTTGTTGCAAGAAATGCTAACATGCAGGGCACGGAGTTGACA
GCTAATGATGTGGCTAACGCTGTTCTCTTCCTAGCAAGTGATGAAGCTAG
GTACATAAGTGGAACGAATC
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