EY665757

Overview
NameEY665757
Unique NameEY665757
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_PROM9 (50S ribosomal protein L15 OS=Prochlorococcus marinus (strain MIT 9312) GN=rplO1 PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.658e-31
Identity = 77/146 (52.74%), Postives = 100/146 (68.49%), Query Frame = 1
Query:    4 GSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 441
            GSRK+ +RKGRGIAAGQG SCGFGMRGQKSRSG   R GFEGGQMPLYRR+PKL+            +  +NL  ++   F + D V+L++L KKGLI     + K PLKILG+G+++ KL  +A AF+  AK+K+E AG +  +L
Sbjct:   13 GSRKKKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFE---IINQKNFSIINLDKLK--DFNDNDTVNLDSLVKKGLI----FKPKFPLKILGNGKVNVKLTVQAHAFTKVAKQKIEDAGGSCELL 149          
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_PROMS (50S ribosomal protein L15 OS=Prochlorococcus marinus (strain AS9601) GN=rplO PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.148e-31
Identity = 74/140 (52.86%), Postives = 97/140 (69.29%), Query Frame = 1
Query:    4 GSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 423
            GSRK+ +RKGRGIAAGQG SCGFGMRGQKSRSG   R GFEGGQMPLYRR+PKL+            +  +NL+ +    F + D V++++L KKGLI     + K PLKILG+G+++ KL  +A +F+  AK+K+E AG
Sbjct:   13 GSRKKKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFE---IINQKNFSIINLEKLN--DFKDNDTVNIDSLVKKGLI----FKPKFPLKILGNGKINVKLKVQAHSFTKVAKQKIEDAG 143          
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_SYNS9 (50S ribosomal protein L15 OS=Synechococcus sp. (strain CC9902) GN=rplO PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.390e-30
Identity = 82/153 (53.59%), Postives = 103/153 (67.32%), Query Frame = 1
Query:    4 GSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGL--PKYVPV----NLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELS-KKLNFKARAFSTSAKEKLEAAGCTLTVL 441
            G+R+R +RKGRGIAAGQG SCGFGMRGQKSRSG   R GFEGGQMPLYRR+PKL+      H  L  PK+  V     LKD++     +G  V+L++L K G++       K PLK+LG+GEL+ K L  +A AF+TSA+ K+EAAG T   L
Sbjct:   13 GARRRKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLK------HFPLVNPKHFTVLNVSALKDLK-----DGATVNLDSLVKDGIVT----SPKHPLKMLGNGELTVKNLTVQASAFTTSARTKIEAAGGTCETL 150          
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_CYAP8 (50S ribosomal protein L15 OS=Cyanothece sp. (strain PCC 8801) GN=rplO PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.390e-30
Identity = 81/149 (54.36%), Postives = 99/149 (66.44%), Query Frame = 1
Query:    4 GSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGL--PK-YVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 441
            GS KR  R GRGI+AGQG SCGFGMRGQKSRSG G + GFEGGQMPLYRRIPKL+      H  L  PK Y  +N+  +E+       EV+LE+L ++G+I  +      PLK+LGDG L+K L  KA AFS SA+EK+ A G +  VL
Sbjct:   11 GSTKRRRRVGRGISAGQGASCGFGMRGQKSRSGTGTKAGFEGGQMPLYRRIPKLK------HFPLVNPKHYTIINVGKLES--LEPNTEVTLESLMEQGIITTNDG----PLKVLGDGTLTKALTVKAAAFSKSAQEKIAATGGSWEVL 147          
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_SYNSC (50S ribosomal protein L15 OS=Synechococcus sp. (strain CC9605) GN=rplO PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.815e-30
Identity = 78/148 (52.70%), Postives = 100/148 (67.57%), Query Frame = 1
Query:    4 GSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFL-EGDEVSLETLKKKGLINPSGRERKLPLKILGDGEL-SKKLNFKARAFSTSAKEKLEAAGCTLTVL 441
            G+R+R +RKGRGIAAGQG SCGFGMRGQKSRSG   R GFEGGQMPLYRR+PKL+      H  L       + ++ A   L +G  V+L++L K G++       K PLK+LG+GEL +KKL  +A AF++SA  K+EAAG T  +L
Sbjct:   13 GARRRKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLK------HFPLVNPKHFTVLNVSALNDLKDGSTVNLDSLVKDGIVT----SPKHPLKMLGNGELTAKKLTVQAAAFTSSALTKIEAAGGTCDIL 150          
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_PROMA (50S ribosomal protein L15 OS=Prochlorococcus marinus GN=rplO PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.371e-30
Identity = 76/141 (53.90%), Postives = 92/141 (65.25%), Query Frame = 1
Query:    4 GSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFL-EGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 423
            G+RKR  RKGRGIAAGQG SCGFGMRGQKSRSG   R GFEGGQMPLYRR+PKL+      H  L       L ++ +   L EG  V+L++L K G++       K PLK+LG+G L  KL  +A AF+ SAK K+E AG
Sbjct:   14 GARKRKTRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLK------HFPLVNSKSFTLINVASLNSLKEGSTVNLDSLVKTGIVT----SPKYPLKVLGNGNLKVKLVVQAAAFTASAKTKIEGAG 144          
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_SYNPX (50S ribosomal protein L15 OS=Synechococcus sp. (strain WH8102) GN=rplO PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.282e-30
Identity = 76/142 (53.52%), Postives = 97/142 (68.31%), Query Frame = 1
Query:    4 GSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFL-EGDEVSLETLKKKGLINPSGRERKLPLKILGDGEL-SKKLNFKARAFSTSAKEKLEAAG 423
            G+R+R +RKGRGIAAGQG SCGFGMRGQKSRSG   R GFEGGQMPLYRR+PKL+      H  L       + ++ A   L +G  V+L++L K G++       K PLKILG+G+L +KKL  +A AF+ SA+ K+EAAG
Sbjct:   14 GARRRKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLK------HFPLVNPKHFTVLNVSALNSLKDGSTVNLDSLVKDGVVT----SPKHPLKILGNGDLTAKKLTVQAAAFTASARTKIEAAG 145          
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_PROM5 (50S ribosomal protein L15 OS=Prochlorococcus marinus (strain MIT 9515) GN=rplO PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.282e-30
Identity = 78/147 (53.06%), Postives = 98/147 (66.67%), Query Frame = 1
Query:    4 GSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETL-KKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 441
            GSRK+ +RKGRGIAAGQG SCGFGMRGQKSRSG   R GFEGGQMPLYRR+PKL+            Y  VNL  +  + F + + V++++L KKK L  P     K PLKILG+G +  KL  +A AF+  A+EK+E+AG +  VL
Sbjct:   13 GSRKKKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFE---IINQKNYSIVNLSKL--SEFKDNEIVNIDSLVKKKLLFKP-----KFPLKILGNGVVKVKLKVQAHAFTKVAQEKIESAGGSCEVL 149          
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_SYNR3 (50S ribosomal protein L15 OS=Synechococcus sp. (strain RCC307) GN=rplO PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 6.898e-30
Identity = 75/140 (53.57%), Postives = 92/140 (65.71%), Query Frame = 1
Query:    4 GSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 423
            G+R+R MRKGRGIAAGQG SCGFGMRGQKSRSG   R GFEGGQMPLYRR+PKL+           ++  VN+   E A    G  V+ ++L + G++       K  LK+LGDGEL  KL   A AF+ SA+EK+EAAG
Sbjct:   13 GARRRKMRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFT---LVNPKRFTVVNVG--ELAELKAGTVVTRDSLTEAGILT----SPKHALKVLGDGELKVKLTVHAAAFTASAREKIEAAG 143          
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_MICAN (50S ribosomal protein L15 OS=Microcystis aeruginosa (strain NIES-843) GN=rplO PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 6.898e-30
Identity = 75/140 (53.57%), Postives = 91/140 (65.00%), Query Frame = 1
Query:    1 PGSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAA 420
            PGS KR  R GRG++AGQG SCG GMRGQKSRSG G R GFEGGQMPLYRR+PKL+           +Y  VNL+ +  A      EV+LE+L K  ++  +      PLK+LGDGE++  L  KA AFS SAKEK+ AA
Sbjct:   10 PGSTKRRRRVGRGVSAGQGASCGLGMRGQKSRSGTGTRPGFEGGQMPLYRRVPKLKHFP---LVNPRQYTIVNLRKL--ASLPANTEVTLESLLKAKILTSNDG----PLKVLGDGEITVPLKVKAAAFSNSAKEKITAA 140          
The following BLAST results are available for this feature:
BLAST of EY665757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL15_PROM93.658e-3152.7450S ribosomal protein L15 OS=Prochlorococcus marin... [more]
RL15_PROMS8.148e-3152.8650S ribosomal protein L15 OS=Prochlorococcus marin... [more]
RL15_SYNS91.390e-3053.5950S ribosomal protein L15 OS=Synechococcus sp. (st... [more]
RL15_CYAP81.390e-3054.3650S ribosomal protein L15 OS=Cyanothece sp. (strai... [more]
RL15_SYNSC1.815e-3052.7050S ribosomal protein L15 OS=Synechococcus sp. (st... [more]
RL15_PROMA2.371e-3053.9050S ribosomal protein L15 OS=Prochlorococcus marin... [more]
RL15_SYNPX5.282e-3053.5250S ribosomal protein L15 OS=Synechococcus sp. (st... [more]
RL15_PROM55.282e-3053.0650S ribosomal protein L15 OS=Prochlorococcus marin... [more]
RL15_SYNR36.898e-3053.5750S ribosomal protein L15 OS=Synechococcus sp. (st... [more]
RL15_MICAN6.898e-3053.5750S ribosomal protein L15 OS=Microcystis aeruginos... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-C03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665757 ID=EY665757; Name=EY665757; organism=Citrus sinensis; type=EST; length=876bp
CCGGGTTCGAGAAAGAGACCTATGAGAAAGGGGAGAGGAATAGCAGCTGG
GCAAGGTAACAGCTGTGGGTTTGGAATGAGAGGTCAGAAATCGAGGTCTG
GTCCTGGCGTTAGAAAGGGTTTTGAAGGTGGTCAAATGCCTCTTTATCGT
CGAATTCCTAAGCTCCGTGGGATTGCCGGAGGTATGCATGCTGGGTTACC
TAAGTATGTCCCTGTTAACTTGAAAGACATAGAAGCAGCTGGTTTTCTAG
AGGGGGATGAAGTCTCACTAGAGACTTTGAAGAAGAAGGGCTTGATCAAT
CCCTCAGGAAGAGAAAGGAAACTGCCTTTAAAGATTCTTGGTGATGGAGA
ATTAAGCAAGAAGCTGAACTTCAAGGCTCGTGCCTTCTCTACATCAGCAA
AGGAGAAGCTTGAAGCTGCAGGCTGTACCCTCACTGTCTTACCTGGCCGA
AAGAAGTGGGTGAAACCATCAGTAGCTAAGAACCTTGCACGAGCTGAAGA
ATACTTCGCCCAAGAAGAGAGCTGCTGCAGCTGCATCCGATTCAACTTCA
GCTTGAACCACTTGGTTTTTTTCCCTCCCTGTAACTAAGTAGAGCCCATT
GAATTGTCTTCCGATTCTTTTTTCTCTGGTTTTAAGGTCTTCGGGGGTAC
CAAAATTGAAAGGAGGGTGGTCTAATACTGGTAATTTTCGGGAATTTCGT
CTCCTTATTGTTATTCCCCTTCCTTTTTTAAATTTTAGTGTTAATATTTA
CATGTTCTCGCTTCCCGCGTGTTACTTCCCTCGCCCTTCCCTCTCCTTCC
GTTATTATTGTTGTGACTCAAACGCCTATTTTGTGTTTCGCGCAGAGCAA
TACTGACCCCAACCACTCTCACAAGT
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