EY665757

Overview
NameEY665757
Unique NameEY665757
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_CYAP7 (50S ribosomal protein L15 OS=Cyanothece sp. (strain PCC 7424) GN=rplO PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 9.009e-30
Identity = 77/145 (53.10%), Postives = 93/145 (64.14%), Query Frame = 1
Query:    4 GSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTV 438
            G+ KR  R GRGI+AGQG SCGFGMRGQKSRSG G + GFEGGQMPLYRRIPKL+           +Y  +N+  +  A      EV+LETL   GLI  +      PLKILG+GEL+  L  KA AF+  A+EK+EAAG +  V
Sbjct:   11 GATKRRRRVGRGISAGQGASCGFGMRGQKSRSGTGTKPGFEGGQMPLYRRIPKLKHFP---LVNRRQYTIINVGQL--ASLDPNSEVTLETLMDAGLITTNDG----PLKILGNGELTIPLTIKAAAFTKGAQEKIEAAGGSCVV 146          
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_PROMT (50S ribosomal protein L15 OS=Prochlorococcus marinus (strain NATL2A) GN=rplO PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.177e-29
Identity = 73/140 (52.14%), Postives = 93/140 (66.43%), Query Frame = 1
Query:    4 GSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 423
            GSR++ MRKGRGIAAGQG SCGFGMRGQKSRSG   R GFEGGQMPLYRR+PKL+            +  +N+  + A    +G  V+L+ L K+G++     + K PLKILG+G+L  KL  +A AF+ SAK K+E  G
Sbjct:   13 GSRRKKMRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFP---IVNQKNFTVLNVSRLNA--LKDGTIVNLDLLVKEGILT----KPKNPLKILGNGKLEVKLTVQAAAFTASAKNKIEEVG 143          
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_PROM1 (50S ribosomal protein L15 OS=Prochlorococcus marinus (strain NATL1A) GN=rplO PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.177e-29
Identity = 73/140 (52.14%), Postives = 93/140 (66.43%), Query Frame = 1
Query:    4 GSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 423
            GSR++ MRKGRGIAAGQG SCGFGMRGQKSRSG   R GFEGGQMPLYRR+PKL+            +  +N+  + A    +G  V+L+ L K+G++     + K PLKILG+G L  KL  +A AF+ SAK+K+E  G
Sbjct:   13 GSRRKKMRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFP---IVNQKNFTVLNVSRLNA--LKDGTIVNLDLLVKEGILT----KPKNPLKILGNGNLEVKLTVQAAAFTASAKKKIEEVG 143          
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_SYNP2 (50S ribosomal protein L15 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=rplO PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.621e-29
Identity = 75/140 (53.57%), Postives = 87/140 (62.14%), Query Frame = 1
Query:    4 GSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 423
            GS+KR  R GRGIAAGQG SCGFGMRGQKSRSG G + GFEGGQMPLYRR+PKL+                 L D+ A       EV+LE+L   G++  +      PLK+LGDGELS  L   A AFS  AK K+EAAG
Sbjct:   11 GSKKRRRRVGRGIAAGQGASCGFGMRGQKSRSGTGTKAGFEGGQMPLYRRVPKLKHFTIVNPKNFTIVNVGQLTDLPA-----NTEVTLESLMAAGIVTTNDG----PLKVLGDGELSVALKVTAAAFSNGAKAKIEAAG 141          
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_ANASP (50S ribosomal protein L15 OS=Anabaena sp. (strain PCC 7120) GN=rplO PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.621e-29
Identity = 75/146 (51.37%), Postives = 94/146 (64.38%), Query Frame = 1
Query:    4 GSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 441
            GS+KR  R GRGI+AGQG S G GMRGQKSRSG G R GFEGGQ PLYRRIPKL+G           Y  +N++ +  A      EV+LE+L+  G++  +    K PLKILG+G+L   LN KA AF+  A+ K+EAAG +  VL
Sbjct:   11 GSKKRRRRVGRGISAGQGASAGLGMRGQKSRSGSGTRPGFEGGQQPLYRRIPKLKGFP---VVNRKIYTTINVEKL--ADLPANTEVTLESLRAAGILTAA----KGPLKILGNGDLGVALNVKAAAFTGQARSKIEAAGGSCEVL 147          
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_SYNJA (50S ribosomal protein L15 OS=Synechococcus sp. (strain JA-3-3Ab) GN=rplO PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.839e-29
Identity = 73/141 (51.77%), Postives = 91/141 (64.54%), Query Frame = 1
Query:    1 PGSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 423
            PGS +R  R GRGIAAGQG SCG GMRGQK+R G G R GFEGGQ PLYRR+PKL+      +   P+Y  +NL+ +  A    G EVSLE+L   G++  +      PLKILGDGE+   L  +A A + SA+ K+EAAG
Sbjct:   10 PGSTRRRRRLGRGIAAGQGASCGKGMRGQKARKGGGPRPGFEGGQTPLYRRLPKLKHFP--RYVRRPQYTLINLRAL--AKLPAGSEVSLESLMDLGIVTTNDG----PLKILGDGEVGVPLTIRAAAITPSARAKVEAAG 142          
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_ANAVT (50S ribosomal protein L15 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=rplO PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.839e-29
Identity = 74/146 (50.68%), Postives = 93/146 (63.70%), Query Frame = 1
Query:    4 GSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 441
            GS+KR  R GRGI+AGQG S G GMRGQKSRSG G R GFEGGQ PLYRRIPKL+G           Y  +N++ +  A      EV+LE+L+  G++       K PLK+LG+G+L   LN KA AF+  A+ K+EAAG +  VL
Sbjct:   11 GSKKRRRRVGRGISAGQGASAGLGMRGQKSRSGSGTRPGFEGGQQPLYRRIPKLKGFP---VVNRKIYTTINVEKL--ADLPANTEVTLESLRASGILTAV----KGPLKVLGNGDLGVALNVKAAAFTGQARSKIEAAGGSCEVL 147          
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_SYNJB (50S ribosomal protein L15 OS=Synechococcus sp. GN=rplO PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.943e-28
Identity = 72/146 (49.32%), Postives = 94/146 (64.38%), Query Frame = 1
Query:    4 GSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 441
            GS +R  R GRG++AGQG SCG GMRGQK+R G   R GFEGGQ PLYRR+PKL+      +    +Y  VNL+ +  A    G EVSLE+L ++G++  +      PLKILGDGE+S  L  +A A + SAK K+EAAG  + +L
Sbjct:   11 GSTRRRRRLGRGVSAGQGASCGKGMRGQKARKGGSTRPGFEGGQTPLYRRLPKLKHFP--RYRRRLEYTLVNLRAL--ADLPAGSEVSLESLMERGIVTTNDG----PLKILGDGEVSVPLTIRAAAITASAKVKVEAAGGRVEIL 148          
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_NOSP7 (50S ribosomal protein L15 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=rplO PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.432e-28
Identity = 73/146 (50.00%), Postives = 92/146 (63.01%), Query Frame = 1
Query:    4 GSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 441
            GS+KR  R  RGI+AGQG S G GMRGQKSRSG G R GFEGGQ PLYRR+PKL+G           Y  +N++ +  A      EV+L +LK  G++       K PLKILG+GELS  L  +A AF+ +A+ K+EAAG +  VL
Sbjct:   11 GSKKRKKRVARGISAGQGASAGLGMRGQKSRSGSGTRPGFEGGQQPLYRRLPKLKGFP---IVNQKIYTTINVEKL--ASLPANTEVTLASLKAAGILTAV----KGPLKILGNGELSTPLKVQAAAFTGTARSKIEAAGGSCEVL 147          
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_TRIEI (50S ribosomal protein L15 OS=Trichodesmium erythraeum (strain IMS101) GN=rplO PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.138e-27
Identity = 71/140 (50.71%), Postives = 88/140 (62.86%), Query Frame = 1
Query:    4 GSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 423
            GS++R  R GRGI+AGQG SCG GMRGQKSRSG   R GFEGGQ PLYRR+PKL+G          KY  +N+  +  +      EV+L +L K G+I         PLKILGDG+L+  L   A AF+ SA+ K+EAAG
Sbjct:   11 GSQQRGRRVGRGISAGQGASCGKGMRGQKSRSGGSTRPGFEGGQNPLYRRLPKLKGFP---MVNRKKYTIINVSKL--SSLPANTEVTLASLIKVGIITTDDG----PLKILGDGDLNIPLKVYAAAFTASARSKIEAAG 141          
The following BLAST results are available for this feature:
BLAST of EY665757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL15_CYAP79.009e-3053.1050S ribosomal protein L15 OS=Cyanothece sp. (strai... [more]
RL15_PROMT1.177e-2952.1450S ribosomal protein L15 OS=Prochlorococcus marin... [more]
RL15_PROM11.177e-2952.1450S ribosomal protein L15 OS=Prochlorococcus marin... [more]
RL15_SYNP22.621e-2953.5750S ribosomal protein L15 OS=Synechococcus sp. (st... [more]
RL15_ANASP2.621e-2951.3750S ribosomal protein L15 OS=Anabaena sp. (strain ... [more]
RL15_SYNJA5.839e-2951.7750S ribosomal protein L15 OS=Synechococcus sp. (st... [more]
RL15_ANAVT5.839e-2950.6850S ribosomal protein L15 OS=Anabaena variabilis (... [more]
RL15_SYNJB4.943e-2849.3250S ribosomal protein L15 OS=Synechococcus sp. GN=... [more]
RL15_NOSP78.432e-2850.0050S ribosomal protein L15 OS=Nostoc punctiforme (s... [more]
RL15_TRIEI7.138e-2750.7150S ribosomal protein L15 OS=Trichodesmium erythra... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-C03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665757 ID=EY665757; Name=EY665757; organism=Citrus sinensis; type=EST; length=876bp
CCGGGTTCGAGAAAGAGACCTATGAGAAAGGGGAGAGGAATAGCAGCTGG
GCAAGGTAACAGCTGTGGGTTTGGAATGAGAGGTCAGAAATCGAGGTCTG
GTCCTGGCGTTAGAAAGGGTTTTGAAGGTGGTCAAATGCCTCTTTATCGT
CGAATTCCTAAGCTCCGTGGGATTGCCGGAGGTATGCATGCTGGGTTACC
TAAGTATGTCCCTGTTAACTTGAAAGACATAGAAGCAGCTGGTTTTCTAG
AGGGGGATGAAGTCTCACTAGAGACTTTGAAGAAGAAGGGCTTGATCAAT
CCCTCAGGAAGAGAAAGGAAACTGCCTTTAAAGATTCTTGGTGATGGAGA
ATTAAGCAAGAAGCTGAACTTCAAGGCTCGTGCCTTCTCTACATCAGCAA
AGGAGAAGCTTGAAGCTGCAGGCTGTACCCTCACTGTCTTACCTGGCCGA
AAGAAGTGGGTGAAACCATCAGTAGCTAAGAACCTTGCACGAGCTGAAGA
ATACTTCGCCCAAGAAGAGAGCTGCTGCAGCTGCATCCGATTCAACTTCA
GCTTGAACCACTTGGTTTTTTTCCCTCCCTGTAACTAAGTAGAGCCCATT
GAATTGTCTTCCGATTCTTTTTTCTCTGGTTTTAAGGTCTTCGGGGGTAC
CAAAATTGAAAGGAGGGTGGTCTAATACTGGTAATTTTCGGGAATTTCGT
CTCCTTATTGTTATTCCCCTTCCTTTTTTAAATTTTAGTGTTAATATTTA
CATGTTCTCGCTTCCCGCGTGTTACTTCCCTCGCCCTTCCCTCTCCTTCC
GTTATTATTGTTGTGACTCAAACGCCTATTTTGTGTTTCGCGCAGAGCAA
TACTGACCCCAACCACTCTCACAAGT
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