EY665757

Overview
NameEY665757
Unique NameEY665757
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_THEEB (50S ribosomal protein L15 OS=Thermosynechococcus elongatus (strain BP-1) GN=rplO PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.323e-27
Identity = 73/143 (51.05%), Postives = 91/143 (63.64%), Query Frame = 1
Query:    4 GSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPK---YVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 423
            GSR+R  R GRGIAAGQG S GFGMRGQKSRSG   R GFEGGQ PLYRR+PKL+      H  L K   Y  +N+  +          V++++L + G++  +    K PLK+LGDGEL+ KL   A AFS SA+ K+EAAG
Sbjct:   11 GSRRRKRRIGRGIAAGQGASGGFGMRGQKSRSGRPTRPGFEGGQNPLYRRLPKLK------HFPLVKRKVYTTINVGRLNT--LPANSVVTVQSLLEAGILTTA----KYPLKVLGDGELNVKLEVHAAAFSGSARSKIEAAG 141          
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_GLOVI (50S ribosomal protein L15 OS=Gloeobacter violaceus GN=rplO PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.323e-27
Identity = 71/145 (48.97%), Postives = 88/145 (60.69%), Query Frame = 1
Query:    4 GSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTV 438
            GSR R +R GRG +AGQG + G GMRGQK RSG GVR GFEGGQ+PLY R+PKL+G           Y  VNLK +         EV++ETL   G++  +      PL++LGDGE    L   A  F+ SA+EK+EAAG T TV
Sbjct:   14 GSRHRKLRVGRGHSAGQGKTSGRGMRGQKCRSGGGVRPGFEGGQIPLYMRLPKLKGFE---LVNPSSYTIVNLKQLR--DLPADSEVNIETLLDAGILTATSG----PLRVLGDGEAHVALQITAAYFTASAREKIEAAGGTCTV 149          
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_GEOTN (50S ribosomal protein L15 OS=Geobacillus thermodenitrificans (strain NG80-2) GN=rplO PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.323e-27
Identity = 70/141 (49.65%), Postives = 91/141 (64.54%), Query Frame = 1
Query:    1 PGSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 423
            PGSRK+ +R GRGI +G G + G G +GQK+RSG GVR GFEGGQ PL+RR+PK     G  +    +Y  VNL  +    F +G EV+ E L +KG+I+    + K  +KILG G++ KKL  KA  FS SAKE +EAAG
Sbjct:   10 PGSRKKAVRVGRGIGSGNGKTAGRGHKGQKARSGGGVRLGFEGGQTPLFRRLPK----RGFTNINRKEYAVVNLDRLNI--FEDGTEVTPELLLEKGVIS----KLKSGVKILGKGQIEKKLTVKAHKFSASAKEAIEAAG 140          
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_CARHZ (50S ribosomal protein L15 OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=rplO PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.218e-26
Identity = 73/148 (49.32%), Postives = 91/148 (61.49%), Query Frame = 1
Query:    1 PGSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPK-YVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 441
            PGSR++P RKG+GI +G G + G G +GQK+RSG GVR GFEGGQMPLYRR+PK      G H    K  + +N+  +    F +G  V+ E L + G+I   G      +KILG GEL K L  KA AFS SAKEK+ AAG    VL
Sbjct:   10 PGSRQKPTRKGQGIGSGLGKTAGRGQKGQKARSGGGVRPGFEGGQMPLYRRLPK-----RGFHNKFAKEIIAINVDRLNK--FEDGTVVTPELLLETGIIKKIGD----GVKILGGGELKKALTVKAHAFSESAKEKITAAGGQAEVL 146          
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_ANOFW (50S ribosomal protein L15 OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=rplO PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.218e-26
Identity = 71/147 (48.30%), Postives = 93/147 (63.27%), Query Frame = 1
Query:    1 PGSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 441
            PGSRK   R GRGI +G G + G G +GQ +RSG GVR GFEGGQ PL+RR+PK     G  +    +Y  VNL+ +    F +G EV+ E L + G+++    + K  +K+LGDGEL+KKL  KA  FS SAKE +EAAG T  V+
Sbjct:   10 PGSRKERNRVGRGIGSGNGKTSGKGHKGQNARSGGGVRIGFEGGQTPLFRRLPK----RGFTNIHRKEYAIVNLEALNR--FEDGTEVTPELLLETGVVS----KLKAGIKVLGDGELTKKLTVKAHKFSASAKEAIEAAGGTTEVI 146          
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_CYAA5 (50S ribosomal protein L15 OS=Cyanothece sp. (strain ATCC 51142) GN=rplO PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.590e-26
Identity = 71/142 (50.00%), Postives = 91/142 (64.08%), Query Frame = 1
Query:    4 GSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLR--GIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 423
            GS KR  R GRGI+AGQG S GFGMRGQKSRSG G + GFEGGQMPLYRR+PKL+   +    H     Y  +N+  + +       EV+LE+L + GLI  +      PLK+LG+GEL+  L  +A  F+ SAK K+E+AG
Sbjct:   11 GSTKRRRRIGRGISAGQGASGGFGMRGQKSRSGTGTKAGFEGGQMPLYRRVPKLKHFPLVNPSH-----YTIINVGKLNSLS--PNTEVTLESLMEVGLITSNDG----PLKVLGNGELTVPLTVRAPKFTASAKAKIESAG 141          
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_BACSU (50S ribosomal protein L15 OS=Bacillus subtilis GN=rplO PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.543e-26
Identity = 71/146 (48.63%), Postives = 91/146 (62.33%), Query Frame = 1
Query:    4 GSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 441
            GSRK   R GRGI +G G + G G +GQ +RSG GVR GFEGGQMPL++R+PK     G  +    +Y  VNL  +   GF EG EV+ E L + G+I+    +    +KILG+G+L KKL  KA  FS SAKE +EAAG T  V+
Sbjct:   11 GSRKTRNRVGRGIGSGNGKTAGKGHKGQNARSGGGVRPGFEGGQMPLFQRLPK----RGFTNINRKEYAVVNLDKLN--GFAEGTEVTPELLLETGVIS----KLNAGVKILGNGKLEKKLTVKANKFSASAKEAVEAAGGTAEVI 146          
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_SYNY3 (50S ribosomal protein L15 OS=Synechocystis sp. (strain PCC 6803) GN=rplO PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.627e-26
Identity = 70/143 (48.95%), Postives = 90/143 (62.94%), Query Frame = 1
Query:    4 GSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDI---EAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 423
            G++KR  R GRGIAAGQG SCGFGMRGQKSRSG G + GFEGGQMPLYRR+PKL+          P Y P +   +   + AG      V+LE+L + G++  +      PLK+LG+GEL+  L   A   S +A+ K+EAAG
Sbjct:   11 GAKKRRRRVGRGIAAGQGASCGFGMRGQKSRSGTGTKAGFEGGQMPLYRRLPKLK--------HFPLYNPKHFTVVNVGKLAGLAPNTVVTLESLMEAGIVTSNDG----PLKVLGNGELAVALTVHAPC-SKAAQAKIEAAG 140          
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_CLOTH (50S ribosomal protein L15 OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=rplO PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.627e-26
Identity = 71/147 (48.30%), Postives = 91/147 (61.90%), Query Frame = 1
Query:    1 PGSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 441
            PGS+K P RKGRG   G G + G G +GQ +RSG GVR GFEGGQMPLYRR+PK     G  +     Y  VN+  + A  F +G  V+ E LK+KG+I    ++    + ILG+GEL KKL  KA  FS +A EK+EAAG  + V+
Sbjct:   10 PGSKKLPKRKGRGHGTGNGKTAGRGHKGQNARSGGGVRPGFEGGQMPLYRRVPK----RGFTNIFSKVYTEVNVSALNA--FDDGTVVTQELLKEKGII----KKINDGVVILGNGELKKKLTVKAARFSKTAAEKIEAAGGKVEVI 146          
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_GEOKA (50S ribosomal protein L15 OS=Geobacillus kaustophilus GN=rplO PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.043e-26
Identity = 68/141 (48.23%), Postives = 90/141 (63.83%), Query Frame = 1
Query:    1 PGSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 423
            PGSRK+ +R GRGI +G G + G G +GQ +RSG GVR GFEGGQ PL+RR+PK     G  +    +Y  VNL+ +    F +G EV+ E L + G+I+    + K  +KILG G++ KKL  KA  FS SAKE +EAAG
Sbjct:   10 PGSRKKAVRVGRGIGSGNGKTSGRGQKGQNARSGGGVRLGFEGGQTPLFRRLPK----RGFTNINRKEYAVVNLEKLNR--FEDGTEVTPELLLETGVIS----KLKSGVKILGKGQIEKKLTVKAHKFSASAKEAIEAAG 140          
The following BLAST results are available for this feature:
BLAST of EY665757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL15_THEEB9.323e-2751.0550S ribosomal protein L15 OS=Thermosynechococcus e... [more]
RL15_GLOVI9.323e-2748.9750S ribosomal protein L15 OS=Gloeobacter violaceus... [more]
RL15_GEOTN9.323e-2749.6550S ribosomal protein L15 OS=Geobacillus thermoden... [more]
RL15_CARHZ1.218e-2649.3250S ribosomal protein L15 OS=Carboxydothermus hydr... [more]
RL15_ANOFW1.218e-2648.3050S ribosomal protein L15 OS=Anoxybacillus flavith... [more]
RL15_CYAA51.590e-2650.0050S ribosomal protein L15 OS=Cyanothece sp. (strai... [more]
RL15_BACSU3.543e-2648.6350S ribosomal protein L15 OS=Bacillus subtilis GN=... [more]
RL15_SYNY34.627e-2648.9550S ribosomal protein L15 OS=Synechocystis sp. (st... [more]
RL15_CLOTH4.627e-2648.3050S ribosomal protein L15 OS=Clostridium thermocel... [more]
RL15_GEOKA6.043e-2648.2350S ribosomal protein L15 OS=Geobacillus kaustophi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-C03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665757 ID=EY665757; Name=EY665757; organism=Citrus sinensis; type=EST; length=876bp
CCGGGTTCGAGAAAGAGACCTATGAGAAAGGGGAGAGGAATAGCAGCTGG
GCAAGGTAACAGCTGTGGGTTTGGAATGAGAGGTCAGAAATCGAGGTCTG
GTCCTGGCGTTAGAAAGGGTTTTGAAGGTGGTCAAATGCCTCTTTATCGT
CGAATTCCTAAGCTCCGTGGGATTGCCGGAGGTATGCATGCTGGGTTACC
TAAGTATGTCCCTGTTAACTTGAAAGACATAGAAGCAGCTGGTTTTCTAG
AGGGGGATGAAGTCTCACTAGAGACTTTGAAGAAGAAGGGCTTGATCAAT
CCCTCAGGAAGAGAAAGGAAACTGCCTTTAAAGATTCTTGGTGATGGAGA
ATTAAGCAAGAAGCTGAACTTCAAGGCTCGTGCCTTCTCTACATCAGCAA
AGGAGAAGCTTGAAGCTGCAGGCTGTACCCTCACTGTCTTACCTGGCCGA
AAGAAGTGGGTGAAACCATCAGTAGCTAAGAACCTTGCACGAGCTGAAGA
ATACTTCGCCCAAGAAGAGAGCTGCTGCAGCTGCATCCGATTCAACTTCA
GCTTGAACCACTTGGTTTTTTTCCCTCCCTGTAACTAAGTAGAGCCCATT
GAATTGTCTTCCGATTCTTTTTTCTCTGGTTTTAAGGTCTTCGGGGGTAC
CAAAATTGAAAGGAGGGTGGTCTAATACTGGTAATTTTCGGGAATTTCGT
CTCCTTATTGTTATTCCCCTTCCTTTTTTAAATTTTAGTGTTAATATTTA
CATGTTCTCGCTTCCCGCGTGTTACTTCCCTCGCCCTTCCCTCTCCTTCC
GTTATTATTGTTGTGACTCAAACGCCTATTTTGTGTTTCGCGCAGAGCAA
TACTGACCCCAACCACTCTCACAAGT
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