EY665757

Overview
NameEY665757
Unique NameEY665757
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_BACST (50S ribosomal protein L15 OS=Bacillus stearothermophilus GN=rplO PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.043e-26
Identity = 68/141 (48.23%), Postives = 90/141 (63.83%), Query Frame = 1
Query:    1 PGSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 423
            PGSRK+ +R GRGI +G G + G G +GQ +RSG GVR GFEGGQ PL+RR+PK     G  +    +Y  VNL+ +    F +G EV+ E L + G+I+    + K  +KILG G++ KKL  KA  FS SAKE +EAAG
Sbjct:   10 PGSRKKAVRVGRGIGSGNGKTSGRGQKGQNARSGGGVRLGFEGGQTPLFRRLPK----RGFTNINRKEYAVVNLEKLNR--FEDGTEVTPELLLETGVIS----KLKSGVKILGKGQIEKKLTVKAHKFSASAKEAIEAAG 140          
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_BACLD (50S ribosomal protein L15 OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=rplO PE=3 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 6.043e-26
Identity = 70/146 (47.95%), Postives = 92/146 (63.01%), Query Frame = 1
Query:    4 GSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 441
            GSRK   R GRGI +G G + G G +GQ +RSG GVR GFEGGQMPL++R+PK     G  +    ++  VNL  + +  F EG EV+ E L + G+I+    + K  +KILGDG+L KKL  KA  FS SAK+ +EAAG T  V+
Sbjct:   11 GSRKTRNRVGRGIGSGNGKTAGKGHKGQNARSGGGVRPGFEGGQMPLFQRLPK----RGFTNINRKEFAVVNLDKLNS--FAEGTEVTPELLLETGVIS----KLKSGVKILGDGKLEKKLTVKANKFSASAKQAIEAAGGTAEVI 146          
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_ACAM1 (50S ribosomal protein L15 OS=Acaryochloris marina (strain MBIC 11017) GN=rplO PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.031e-25
Identity = 71/143 (49.65%), Postives = 90/143 (62.94%), Query Frame = 1
Query:    4 GSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVN---LKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 423
            GS+ R  R GRGIAAGQG SCGFGMRGQKSRSG   R GFEGGQ PLYRR+PKL+           +Y  +N   L +++A       +V+LE+L  +G+I  +      PLK+LGDGEL+  LN +A A + SA  K+E AG
Sbjct:   11 GSQHRRRRVGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQNPLYRRVPKLKHFT---LINQKQYTTINVGKLNELKAK-----SDVTLESLMAEGIITSNDG----PLKVLGDGELTVALNVQAAAATQSAIAKVEGAG 141          
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_BACP2 (50S ribosomal protein L15 OS=Bacillus pumilus (strain SAFR-032) GN=rplO PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.999e-25
Identity = 70/146 (47.95%), Postives = 90/146 (61.64%), Query Frame = 1
Query:    4 GSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 441
            GSRK   R GRGI +G G + G G +GQ +RSG GVR GFEGGQMPL++R+PK     G  +     Y  +NL  + +  F EG EV+ E L + G I+    + K  +KILG+G+L KKL  KA  FS SAKE +EAAG T  V+
Sbjct:   11 GSRKERNRVGRGIGSGNGKTSGKGHKGQNARSGGGVRPGFEGGQMPLFQRLPK----RGFTNINRKDYAVINLDRLNS--FDEGTEVTPELLLETGAIS----KLKAGVKILGNGKLEKKLTVKANKFSASAKEAIEAAGGTAEVI 146          
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_BACA2 (50S ribosomal protein L15 OS=Bacillus amyloliquefaciens (strain FZB42) GN=rplO PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.999e-25
Identity = 70/146 (47.95%), Postives = 90/146 (61.64%), Query Frame = 1
Query:    4 GSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 441
            GSRK   R GRGI +G G + G G +GQ +RSG GVR GFEGGQMPL++R+PK     G  +     Y  VN+  +   GF EG EV+ E L + G+I+    +    +KILG+G+L KKL  KA  FS SAKE +EAAG T  V+
Sbjct:   11 GSRKVRNRVGRGIGSGNGKTAGKGHKGQNARSGGGVRPGFEGGQMPLFQRLPK----RGFTNINRKDYAIVNVDKLN--GFAEGTEVTPELLLETGVIS----KLNAGVKILGNGKLEKKLTVKANKFSASAKEAVEAAGGTAEVI 146          
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_GEOSW (50S ribosomal protein L15 OS=Geobacillus sp. (strain WCH70) GN=rplO PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.917e-25
Identity = 68/141 (48.23%), Postives = 88/141 (62.41%), Query Frame = 1
Query:    1 PGSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 423
            PGSRK   R GRGI +G+G + G G +GQ +RSG GVR GFEGGQ PL+RR+PK     G  +    +Y  VNL  +    F +G EV+ E L + G+I+    + K  +KILG G++ KKL  KA  FS SAKE +EAAG
Sbjct:   10 PGSRKERTRVGRGIGSGKGKTSGRGQKGQNARSGGGVRLGFEGGQTPLFRRLPK----RGFTNINRKEYAIVNLDKLNR--FEDGTEVTPELLLETGVIS----KLKSGVKILGKGQIEKKLTVKAHKFSASAKEAIEAAG 140          
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_RUBXD (50S ribosomal protein L15 OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=rplO PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.681e-25
Identity = 67/149 (44.97%), Postives = 93/149 (62.42%), Query Frame = 1
Query:    1 PGSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHA-GLPK-YVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 441
            PGSR+   R GRG  +G G + G G +G K+RSG      +EGGQMPL RR+P+L+G A G H    PK Y PVN+ ++ A   +EGD + L+ L+  GLI    ++    +KILGDGE+ + +  +A AFS +A+EK+EAAG    VL
Sbjct:   10 PGSRRARKRVGRGEGSGYGKTSGRGQKGAKARSGTKAYTTYEGGQMPLQRRLPRLKGEARGRHTPAHPKVYDPVNVGELAA---VEGDTIGLDELRAAGLIR---KKADTLVKILGDGEIDRPVTVRAHAFSRAAREKIEAAGGRAEVL 152          
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_MOOTA (50S ribosomal protein L15 OS=Moorella thermoacetica (strain ATCC 39073) GN=rplO PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.681e-25
Identity = 70/147 (47.62%), Postives = 92/147 (62.59%), Query Frame = 1
Query:    1 PGSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 441
            PGSR R  R GRGI +G G + G G +GQK+RSG GVR+GFEGGQMPL RR+PK     G  +    K VP+N+ ++E   F     V+ E L   GL+    ++ +  +KILGDGEL+KKL  K +A S  A EK+EAAG  + V+
Sbjct:   10 PGSRPRATRVGRGIGSGLGKTSGRGHKGQKARSGGGVRRGFEGGQMPLTRRLPK----RGFTNIFARKLVPINVGELER--FEPETVVTPELLHDAGLV----KQARDGVKILGDGELTKKLTVKVQAASRKAIEKIEAAGGKVEVM 146          
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_THETN (50S ribosomal protein L15 OS=Thermoanaerobacter tengcongensis GN=rplO PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.726e-25
Identity = 69/140 (49.29%), Postives = 89/140 (63.57%), Query Frame = 1
Query:    4 GSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 423
            GS K+  R GRGI +G G + G G +GQ +RSG GVR GFEGGQMPL RRIPK     G  +    +Y  VN+  +E   F +G E++ E L +KG+I    ++ K  +KILGDGEL+KKL  KA  FS SA EK++A G
Sbjct:   11 GSTKKKKRVGRGIGSGHGKTSGRGHKGQNARSGGGVRPGFEGGQMPLTRRIPK----RGFTNIFKKEYAIVNVGTLEER-FEDGAEITPEVLIEKGII----KDVKDGVKILGDGELTKKLTVKAHKFSQSAVEKIQAVG 141          
BLAST of EY665757 vs. ExPASy Swiss-Prot
Match: RL15_DESAP (50S ribosomal protein L15 OS=Desulforudis audaxviator (strain MP104C) GN=rplO PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.726e-25
Identity = 68/140 (48.57%), Postives = 90/140 (64.29%), Query Frame = 1
Query:    4 GSRKRPMRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 423
            G+RK+P RKG+GIA GQG + G G +GQK+RSG GVR+GFEGGQMPL RR+PK     G  +     +  VNL+D+    F EG  V+ E L +  ++    R+    +KILG GEL K L  +A AFS +A+EK+ AAG
Sbjct:   11 GARKKPTRKGQGIATGQGKTAGRGHKGQKARSGGGVRRGFEGGQMPLTRRMPK----RGFTNIFKKFFAVVNLEDLNR--FEEGTVVTPEVLLENRMV----RKGVDGIKILGTGELKKPLTVRAHAFSGAAREKIAAAG 140          
The following BLAST results are available for this feature:
BLAST of EY665757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL15_BACST6.043e-2648.2350S ribosomal protein L15 OS=Bacillus stearothermo... [more]
RL15_BACLD6.043e-2647.9550S ribosomal protein L15 OS=Bacillus licheniformi... [more]
RL15_ACAM11.031e-2549.6550S ribosomal protein L15 OS=Acaryochloris marina ... [more]
RL15_BACP22.999e-2547.9550S ribosomal protein L15 OS=Bacillus pumilus (str... [more]
RL15_BACA22.999e-2547.9550S ribosomal protein L15 OS=Bacillus amyloliquefa... [more]
RL15_GEOSW3.917e-2548.2350S ribosomal protein L15 OS=Geobacillus sp. (stra... [more]
RL15_RUBXD6.681e-2544.9750S ribosomal protein L15 OS=Rubrobacter xylanophi... [more]
RL15_MOOTA6.681e-2547.6250S ribosomal protein L15 OS=Moorella thermoacetic... [more]
RL15_THETN8.726e-2549.2950S ribosomal protein L15 OS=Thermoanaerobacter te... [more]
RL15_DESAP8.726e-2548.5750S ribosomal protein L15 OS=Desulforudis audaxvia... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-C03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665757 ID=EY665757; Name=EY665757; organism=Citrus sinensis; type=EST; length=876bp
CCGGGTTCGAGAAAGAGACCTATGAGAAAGGGGAGAGGAATAGCAGCTGG
GCAAGGTAACAGCTGTGGGTTTGGAATGAGAGGTCAGAAATCGAGGTCTG
GTCCTGGCGTTAGAAAGGGTTTTGAAGGTGGTCAAATGCCTCTTTATCGT
CGAATTCCTAAGCTCCGTGGGATTGCCGGAGGTATGCATGCTGGGTTACC
TAAGTATGTCCCTGTTAACTTGAAAGACATAGAAGCAGCTGGTTTTCTAG
AGGGGGATGAAGTCTCACTAGAGACTTTGAAGAAGAAGGGCTTGATCAAT
CCCTCAGGAAGAGAAAGGAAACTGCCTTTAAAGATTCTTGGTGATGGAGA
ATTAAGCAAGAAGCTGAACTTCAAGGCTCGTGCCTTCTCTACATCAGCAA
AGGAGAAGCTTGAAGCTGCAGGCTGTACCCTCACTGTCTTACCTGGCCGA
AAGAAGTGGGTGAAACCATCAGTAGCTAAGAACCTTGCACGAGCTGAAGA
ATACTTCGCCCAAGAAGAGAGCTGCTGCAGCTGCATCCGATTCAACTTCA
GCTTGAACCACTTGGTTTTTTTCCCTCCCTGTAACTAAGTAGAGCCCATT
GAATTGTCTTCCGATTCTTTTTTCTCTGGTTTTAAGGTCTTCGGGGGTAC
CAAAATTGAAAGGAGGGTGGTCTAATACTGGTAATTTTCGGGAATTTCGT
CTCCTTATTGTTATTCCCCTTCCTTTTTTAAATTTTAGTGTTAATATTTA
CATGTTCTCGCTTCCCGCGTGTTACTTCCCTCGCCCTTCCCTCTCCTTCC
GTTATTATTGTTGTGACTCAAACGCCTATTTTGTGTTTCGCGCAGAGCAA
TACTGACCCCAACCACTCTCACAAGT
back to top