EY665753
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPC_STAS1 (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=clpC PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 5.413e-56 Identity = 128/262 (48.85%), Postives = 172/262 (65.65%), Query Frame = 1 Query: 1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQPFVSAWTGLSG*KKPQLMNLIAFLKMKKTLSQKSYWVGMKLAKV-LNRAFRGDRVGTQKPPFNQFGNFLFFRAPWGGRKTEL 783 LARGEL CIGATTLDEYRK+IEKD ALERRFQPV+V EP+V++TI+ILKGLR+RYE HH++ +DEALVSAA+LS++Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+++ Q+ EK+ AV Q+FE A LRD++ L+ Q K T+ GD ++E DI ++ WTG+ K + + L ++ TL + +G K A +++A R R G K P G+F+F P G KTEL Sbjct: 304 LARGELQCIGATTLDEYRKNIEKDAALERRFQPVQVDEPTVEDTIEILKGLRDRYEAHHRINISDEALVSAAKLSHRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPPNLKEIEQQIEQVKNEKDAAVHAQEFENAANLRDKQTKLEKQYEEANTNWK-----NTQNGD-NTSLSEEDIGEVIAGWTGIPLTKINETES-DRLLNLEDTLHNRV--IGQKDAVTSISKAVRRARAGL-KDPKRPIGSFIFL-GPTGVGKTEL 554
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPC_STAES (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus epidermidis (strain ATCC 12228) GN=clpC PE=3 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 5.066e-54 Identity = 123/266 (46.24%), Postives = 170/266 (63.91%), Query Frame = 1 Query: 1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQPFVSAWTG-----LSG*KKPQLMNLIAFLKMKKTLSQKSYWVGMKLAKVLNRAFRGDRVGTQKPPFNQFGNFLFFRAPWGGRKTEL 783 LARGEL CIGATTLDEYRK+IEKD ALERRFQP++V EP+V++TI+ILKGLR+RYE HH++ +DEAL +AA+LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q D E A+ G + ++E +I ++ WTG ++ + +L+NL L K+ + Q +++A R R G K P G+F+F P G KTEL Sbjct: 304 LARGELQCIGATTLDEYRKNIEKDAALERRFQPIQVDEPTVEDTIEILKGLRDRYEAHHRINISDEALEAAAKLSDRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPSNLKEIEQEIDKVKNEKDAAVHAQEFENAANLRDKQSKLEKQYE---DAKNEWKNAQ---GGLDTALSEENIAEVIAGWTGIPLTKINETESDRLLNLEDTLH-KRVIGQND------AVNSISKAVRRARAGL-KDPKRPIGSFIFL-GPTGVGKTEL 554
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPC_STAEQ (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=clpC PE=3 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 5.066e-54 Identity = 123/266 (46.24%), Postives = 170/266 (63.91%), Query Frame = 1 Query: 1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQPFVSAWTG-----LSG*KKPQLMNLIAFLKMKKTLSQKSYWVGMKLAKVLNRAFRGDRVGTQKPPFNQFGNFLFFRAPWGGRKTEL 783 LARGEL CIGATTLDEYRK+IEKD ALERRFQP++V EP+V++TI+ILKGLR+RYE HH++ +DEAL +AA+LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q D E A+ G + ++E +I ++ WTG ++ + +L+NL L K+ + Q +++A R R G K P G+F+F P G KTEL Sbjct: 304 LARGELQCIGATTLDEYRKNIEKDAALERRFQPIQVDEPTVEDTIEILKGLRDRYEAHHRINISDEALEAAAKLSDRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPSNLKEIEQEIDKVKNEKDAAVHAQEFENAANLRDKQSKLEKQYE---DAKNEWKNAQ---GGLDTALSEENIAEVIAGWTGIPLTKINETESDRLLNLEDTLH-KRVIGQND------AVNSISKAVRRARAGL-KDPKRPIGSFIFL-GPTGVGKTEL 554
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPC_STAHJ (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus haemolyticus (strain JCSC1435) GN=clpC PE=3 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 8.641e-54 Identity = 123/262 (46.95%), Postives = 169/262 (64.50%), Query Frame = 1 Query: 1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQPFVSAWTGLSG*KKPQLMNLIAFLKMKKTLSQKSYWVGMKLAKV-LNRAFRGDRVGTQKPPFNQFGNFLFFRAPWGGRKTEL 783 LARGEL CIGATTLDEYRK+IEKD ALERRFQP++V EP+V++TI ILKGLR+RYE HH++ +DEAL +AA+LS Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q ++ K T GD +++ DI ++ WTG+ K + + L +++TL + +G A +++A R R G K P G+F+F P G KTEL Sbjct: 304 LARGELQCIGATTLDEYRKNIEKDAALERRFQPIQVDEPTVEDTIAILKGLRDRYEAHHRINISDEALEAAAKLSDCYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQYEDAKNEWK------TTQGDQSTSLSKEDIGEVIAGWTGIPLTKINETES-DRLLNLEQTLHDRV--IGQNDAVTSISKAVRRARAGL-KDPKRPIGSFIFL-GPTGVGKTEL 554
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPC_MYCLE (Probable ATP-dependent Clp protease ATP-binding subunit OS=Mycobacterium leprae GN=clpC PE=3 SV=2) HSP 1 Score: 210.305 bits (534), Expect = 1.129e-53 Identity = 127/265 (47.92%), Postives = 172/265 (64.91%), Query Frame = 1 Query: 1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQPFVSAWTGLSG*KKPQLMNLIAFLKMKKTLSQKSYWVGMKLA-KVLNRAFRGDRVGTQKPPFNQFGNFLFFRAPWGGRKTEL 783 LARGEL IGATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD A+V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + +EK A+ QDFEKA LRDRE L AQ + + + +GD+ V+ EVD I + WTG+ K + L+M++ L ++ +G + A K +++A R R G K P G+F+ F P G KTEL Sbjct: 312 LARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDSAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIAEARREKESAIDAQDFEKAASLRDREKQLVAQ--------RAEREKQWRSGDL-DVIAEVDDEQIAEVLGNWTGIPVFKLTE-AETTRLLRMEEELHKRI--IGQEDAVKAVSKAIRRTRAGL-KDPKRPSGSFI-FAGPSGVGKTEL 562
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPC_MYCTU (Probable ATP-dependent Clp protease ATP-binding subunit OS=Mycobacterium tuberculosis GN=clpC PE=1 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 1.474e-53 Identity = 128/265 (48.30%), Postives = 172/265 (64.91%), Query Frame = 1 Query: 1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQPFVSAWTGLSG*KKPQLMNLIAFLKMKKTLSQKSYWVGMKLA-KVLNRAFRGDRVGTQKPPFNQFGNFLFFRAPWGGRKTEL 783 LARGEL IGATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD A+V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + +EK A+ QDFEKA LRDRE L AQ + + + +GD+ VV EVD I + WTG+ K + L+M++ L ++ +G + A K +++A R R G K P G+F+ F P G KTEL Sbjct: 312 LARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQ--------RAEREKQWRSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTE-AETTRLLRMEEELHKRI--IGQEDAVKAVSKAIRRTRAGL-KDPKRPSGSFI-FAGPSGVGKTEL 562
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPC_MYCBO (Probable ATP-dependent Clp protease ATP-binding subunit OS=Mycobacterium bovis GN=clpC PE=3 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 1.474e-53 Identity = 128/265 (48.30%), Postives = 172/265 (64.91%), Query Frame = 1 Query: 1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQPFVSAWTGLSG*KKPQLMNLIAFLKMKKTLSQKSYWVGMKLA-KVLNRAFRGDRVGTQKPPFNQFGNFLFFRAPWGGRKTEL 783 LARGEL IGATTLDEYRK+IEKD ALERRFQPV+V EP+V+ TI+ILKGLR+RYE HH++ TD A+V+AA L+ +YI+DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + +EK A+ QDFEKA LRDRE L AQ + + + +GD+ VV EVD I + WTG+ K + L+M++ L ++ +G + A K +++A R R G K P G+F+ F P G KTEL Sbjct: 312 LARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQ--------RAEREKQWRSGDL-DVVAEVDDEQIAEVLGNWTGIPVFKLTE-AETTRLLRMEEELHKRI--IGQEDAVKAVSKAIRRTRAGL-KDPKRPSGSFI-FAGPSGVGKTEL 562
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPC_STAAW (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain MW2) GN=clpC PE=3 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 2.514e-53 Identity = 121/262 (46.18%), Postives = 168/262 (64.12%), Query Frame = 1 Query: 1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQPFVSAWTGLSG*KKPQLMNLIAFLKMKKTLSQKSYWVGMKLA-KVLNRAFRGDRVGTQKPPFNQFGNFLFFRAPWGGRKTEL 783 LARGEL CIGATTLDEYRK+IEKD ALERRFQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q ++ K + + ++E DI ++ WTG+ K + + L ++ TL ++ +G K A +++A R R G K P G+F+F P G KTEL Sbjct: 304 LARGELQCIGATTLDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQYEEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTKINETES-EKLLSLEDTLHERV--IGQKDAVNSISKAVRRARAGL-KDPKRPIGSFIFL-GPTGVGKTEL 554
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPC_STAAS (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain MSSA476) GN=clpC PE=3 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 2.514e-53 Identity = 121/262 (46.18%), Postives = 168/262 (64.12%), Query Frame = 1 Query: 1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQPFVSAWTGLSG*KKPQLMNLIAFLKMKKTLSQKSYWVGMKLA-KVLNRAFRGDRVGTQKPPFNQFGNFLFFRAPWGGRKTEL 783 LARGEL CIGATTLDEYRK+IEKD ALERRFQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q ++ K + + ++E DI ++ WTG+ K + + L ++ TL ++ +G K A +++A R R G K P G+F+F P G KTEL Sbjct: 304 LARGELQCIGATTLDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQYEEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTKINETES-EKLLSLEDTLHERV--IGQKDAVNSISKAVRRARAGL-KDPKRPIGSFIFL-GPTGVGKTEL 554
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPC_STAAR (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain MRSA252) GN=clpC PE=3 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 2.514e-53 Identity = 121/262 (46.18%), Postives = 168/262 (64.12%), Query Frame = 1 Query: 1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQPFVSAWTGLSG*KKPQLMNLIAFLKMKKTLSQKSYWVGMKLA-KVLNRAFRGDRVGTQKPPFNQFGNFLFFRAPWGGRKTEL 783 LARGEL CIGATTLDEYRK+IEKD ALERRFQPV+V EPSV +T+ ILKGLR+RYE HH++ +DEA+ +A +LS +Y+SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q ++ K + + ++E DI ++ WTG+ K + + L ++ TL ++ +G K A +++A R R G K P G+F+F P G KTEL Sbjct: 304 LARGELQCIGATTLDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQYEEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTKINETES-EKLLSLEDTLHERV--IGQKDAVNSISKAVRRARAGL-KDPKRPIGSFIFL-GPTGVGKTEL 554 The following BLAST results are available for this feature:
BLAST of EY665753 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 194
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665753 ID=EY665753; Name=EY665753; organism=Citrus sinensis; type=EST; length=859bpback to top |