EY665753

Overview
NameEY665753
Unique NameEY665753
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_BRAJA (Chaperone protein clpB OS=Bradyrhizobium japonicum GN=clpB PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 6.012e-39
Identity = 120/316 (37.97%), Postives = 168/316 (53.16%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKEL------RQITKEKNEA---VRGQDFEK-AGELRDREMDLKAQISALVDKGKEMSKAETE-------------------AGDVG-------------------------PVVTEVDIQPFVSAWTGLSG*KKPQLMNLIAFLKMKKTLSQKSYWVGM-KLAKVLNRAFRGDRVGTQKPPFNQFGNFLFFRAPWGGRKTEL 783
            LARGEL CIGATTLDEY+KH+EKD AL RRFQP+ V EPSV++TI IL+GL+++YE HH +R TD ALV++A LS +YI+DRFLPDKAIDL+DEA +R++++    PEE   +++E+      ++  K++++A    R Q  EK   EL ++   L A+ SA  +K  +  K + E                   AG++                            VT   I   VS WTG+   K  +       LKM+ +L ++   VG  +    +  A R  R G Q P     G+F+F   P G  KTEL
Sbjct:  305 LARGELHCIGATTLDEYQKHVEKDAALARRFQPIFVSEPSVEDTISILRGLKDKYEQHHGVRITDSALVASATLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDSMDREIIRLKIEQEALKKESDAGSKSRLQTLEKELVELEEKSASLTARWSAEKNKLSDAQKLKAELDGLRVELANAQRRGEFQKAGELAYGRIPELERQLADIEAKENSGEMMEEAVTANHIAQVVSRWTGVPVDKMLE-GEKDKLLKMEDSLGKRV--VGQAEAVHAVATAVRRSRAGLQDPN-RPMGSFMFL-GPTGVGKTEL 615          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_PHOPR (Chaperone protein clpB OS=Photobacterium profundum GN=clpB PE=3 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 7.852e-39
Identity = 85/165 (51.52%), Postives = 115/165 (69.70%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRD--REMDLKAQISALVDKGKEMSKA 489
            LARGEL C+GATTLDEYR++IEKD ALERRFQ V V EP+V++TI IL+GL+ERYE+HH +  TD A+V+AA+LS++Y+SDR LPDKAIDLIDEA S +R++    PE    LE+ + Q+  E+    +  D      L D   E+D+K +  A +++     KA
Sbjct:  303 LARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAARLSHRYVSDRQLPDKAIDLIDEAASSIRMQIDSKPESLDRLERRIIQLKIEQQALSKESDAASQKRLNDICEELDVKEREYAELEEVWNAEKA 467          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_RICCN (Chaperone protein clpB OS=Rickettsia conorii GN=clpB PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.026e-38
Identity = 85/178 (47.75%), Postives = 118/178 (66.29%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD 534
            LARGEL CIGATTLDEYRK+IEKD AL RRFQPV V EP+V++TI IL+G++E+YE+HH +R +D A+V+AA LS +YI+DR+LPDKAIDLIDEA SR+++  +  PEE  EL++ + QI  E     +  D     ++      L+   S   D G +    +++      +  E+D
Sbjct:  304 LARGELHCIGATTLDEYRKYIEKDAALARRFQPVYVSEPTVEDTISILRGIKEKYELHHAVRISDSAIVAAATLSNRYITDRYLPDKAIDLIDEACSRMKIELSSKPEELDELDRRIIQIKIELAALKKENDEHSKKKIEHLTTALEKLESQSYDMGAKWQAEKSKLQQTQKLKEELD 481          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_PLEBO (Chaperone protein clpB OS=Plectonema boryanum GN=clpB PE=2 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 1.026e-38
Identity = 89/177 (50.28%), Postives = 123/177 (69.49%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEV 531
            LARGEL CIGATTLDEYRK+IEKD ALERRFQ V V +PSV++TI IL+GL+ERYE+HH ++ +D ALV+AA LS +YISDRFLP KAIDL+DEA +++++     PEE  E+++++ Q+  E+    +  D   AG  RDR   L+ +   L D  ++ SK   +      V+T++
Sbjct:  306 LARGELRCIGATTLDEYRKYIEKDAALERRFQQVFVDQPSVEDTISILRGLKERYEVHHGVKISDSALVAAATLSTRYISDRFLPSKAIDLVDEAAAKLKMEITSKPEELDEVDRKVLQLEMERLSLQKEND---AGS-RDRLERLERE---LADFKEDQSKLNAQWQAEKSVITDL 475          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_BIFLO (Chaperone protein clpB OS=Bifidobacterium longum GN=clpB PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.026e-38
Identity = 86/183 (46.99%), Postives = 124/183 (67.76%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD---FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 540
            LARGEL  IGATTLDEYR++IEKDPALERRFQ V V EPSV++TI IL+GL++RYE HHK+   D+ALV+AA LS +YIS R LPDKAIDL+DEA + +R+     PEE  EL++++ ++  E+ +  + +D    E+ G+L+    D + ++S L  +         + GD+   + ++ +Q
Sbjct:  304 LARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTIAILRGLKQRYEAHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAAHLRMELDSSPEEIDELQRKVTRLEMEEMQLKKAEDPASKERLGKLQAELADTREKLSGLKARWDAEQAGHNKVGDLRAKLDDLRVQ 486          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_LISIN (Chaperone protein clpB OS=Listeria innocua GN=clpB PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.749e-38
Identity = 87/173 (50.29%), Postives = 119/173 (68.79%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV 519
            LARGEL CIGATTLDEYR++IEKD ALERRFQ V VPEP+V++T+ IL+GL+ER+EIHH +   D ALV+AA LS +YI+DRFLPDKAIDL+DEA + +R+    +P E  E+ +++ Q+  E  EA   ++ + A E R  EM  +       +  K  SK E+E  ++  +
Sbjct:  305 LARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVPEPTVEDTVSILRGLKERFEIHHGVNIHDNALVAAASLSNRYITDRFLPDKAIDLVDEACATIRVEIDSMPSELDEVTRKVMQL--EIEEAALKEEKDPASE-RRLEMLQRELADYKEEANKMKSKWESEKSEISKI 474          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_GEOSL (Chaperone protein clpB OS=Geobacter sulfurreducens GN=clpB PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.749e-38
Identity = 87/157 (55.41%), Postives = 114/157 (72.61%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVR-GQD---FEKAGELRDREMDLKAQISAL 459
            LARGEL CIGATTL+EYRK+IEKD ALERRFQ V   EPSV++TI IL+GL+E+YE +H +R  D A+++AA LS +YI+DRFLPDKAIDLIDEA SR+R+    +P E  E+E+ + Q+  EK   +R  QD    E+  +L D   +LKA+ + L
Sbjct:  305 LARGELHCIGATTLNEYRKYIEKDAALERRFQQVYTGEPSVEDTIAILRGLKEKYENYHGIRIKDSAIIAAATLSDRYITDRFLPDKAIDLIDEAASRLRIEIDSMPTEIDEVERRIIQLEIEKQALLRESQDPHSLERLKKLADELEELKAKSAEL 461          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_BLOFL (Chaperone protein clpB OS=Blochmannia floridanus GN=clpB PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.749e-38
Identity = 115/321 (35.83%), Postives = 164/321 (51.09%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRL--------------RHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVD---------KGKEMSKAETEAGDVGPV--------------------------------VTEVDIQPFVSAWTGLS-----G*KKPQLMNLIAFLKMKKTLSQKSYWVGMKLAKVLNRAFRGDRVGTQKPPFNQFGNFLFFRAPWGGRKTEL 783
            LARGEL C+GATTLDEY ++IEKD ALERRFQ + + EP+++ TI IL+GL+ERYE+HH +  TD A+V+AA LS +YISDR LPDKAIDLIDEA S +R+              R  QL  E + L+KE  +++K++ E +  +  +K  E    E + K + S+L D         K K +       GD+  +                                V+EV+I   +S WTG+        +K +L+N+   L  +  + Q       +  +V++ A R  R G   P     G+F+F   P G  KTEL
Sbjct:  305 LARGELHCVGATTLDEYSRYIEKDAALERRFQKIFIIEPNIENTIAILRGLKERYELHHNVHITDPAIVAAATLSNRYISDRQLPDKAIDLIDEAASSIRIQIDSKPEDLDRLDRRIIQLKLECQALKKESDELSKKRLEILSMELSQKEQEYSVLESEWKRERSSLFDIQNIKSDLEKAKTILDQSRRIGDLAQMSELQYGRIPELEKKLFNAIQSSNKKMRLLRNYVSEVEIAEVLSKWTGIPISRILANEKNKLLNMETILH-QLVIGQD------EAVRVISNAIRRSRSGLSDPK-RPIGSFMFL-GPTGVGKTEL 616          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB2_SYNY3 (Chaperone protein clpB 2 OS=Synechocystis sp. (strain PCC 6803) GN=clpB2 PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.749e-38
Identity = 81/146 (55.48%), Postives = 105/146 (71.92%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDL 438
            LARG L CIGATTLDEYRK+IEKD ALERRFQ V V EP+V +TI IL+GL+ERYE+HH ++  D ALV+AA LS +YISDRFLPDKAIDL+DEA +++++     PEE  E+++++ Q+  E+    R  D      L   E +L
Sbjct:  305 LARGALRCIGATTLDEYRKYIEKDAALERRFQEVLVDEPNVLDTISILRGLKERYEVHHGVKIADSALVAAAMLSNRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEVDRKILQLEMERLSLQRENDSASKERLEKLEKEL 450          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_RICBR (Chaperone protein clpB OS=Rickettsia bellii (strain RML369-C) GN=clpB PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.285e-38
Identity = 78/123 (63.41%), Postives = 100/123 (81.30%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKE 369
            LARGEL CIGATTLDEYRK+IEKD A  RRFQPV V EP+V++TI IL+G++E+YE+HH +R +D A+V+AA LS +YI+DRFLPDKAIDLIDEA SR+++  +  PEE  EL++ + QI  E
Sbjct:  304 LARGELHCIGATTLDEYRKYIEKDAAFARRFQPVYVSEPTVEDTISILRGIKEKYELHHAVRISDSAIVAAATLSNRYITDRFLPDKAIDLIDEACSRMKIELSSKPEELDELDRRIIQIKIE 426          
The following BLAST results are available for this feature:
BLAST of EY665753 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
CLPB_BRAJA6.012e-3937.97Chaperone protein clpB OS=Bradyrhizobium japonicum... [more]
CLPB_PHOPR7.852e-3951.52Chaperone protein clpB OS=Photobacterium profundum... [more]
CLPB_RICCN1.026e-3847.75Chaperone protein clpB OS=Rickettsia conorii GN=cl... [more]
CLPB_PLEBO1.026e-3850.28Chaperone protein clpB OS=Plectonema boryanum GN=c... [more]
CLPB_BIFLO1.026e-3846.99Chaperone protein clpB OS=Bifidobacterium longum G... [more]
CLPB_LISIN1.749e-3850.29Chaperone protein clpB OS=Listeria innocua GN=clpB... [more]
CLPB_GEOSL1.749e-3855.41Chaperone protein clpB OS=Geobacter sulfurreducens... [more]
CLPB_BLOFL1.749e-3835.83Chaperone protein clpB OS=Blochmannia floridanus G... [more]
CLPB2_SYNY31.749e-3855.48Chaperone protein clpB 2 OS=Synechocystis sp. (str... [more]
CLPB_RICBR2.285e-3863.41Chaperone protein clpB OS=Rickettsia bellii (strai... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-B11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665753 ID=EY665753; Name=EY665753; organism=Citrus sinensis; type=EST; length=859bp
CTTGCCCGAGGAGAGTTACCGTGTATTGGTGCCACAACACTAGATGAATA
TAGAAAGCACATTGAGAAAGATCCAGCATTAGAAAGACGATTCCAGCCAG
TTAAAGTGCCAGAACCGTCAGTGGATGAAACCATACAAATTTTGAAAGGG
CTTCGAGAGCGATATGAAATTCACCACAAGCTTCGTTACACTGATGAAGC
ACTAGTTTCTGCTGCTCAGTTGTCATACCAGTACATCAGTGACCGTTTTC
TCCCTGATAAAGCTATTGATTTGATTGATGAAGCTGGTTCTCGGGTTCGT
CTTCGTCATGCACAGCTCCCCGAGGAAGCTAGAGAGCTTGAAAAAGAGCT
CAGGCAGATAACTAAGGAGAAGAATGAGGCTGTTCGTGGCCAAGACTTTG
AAAAGGCTGGAGAGTTACGTGATAGAGAAATGGACCTTAAGGCTCAGATA
TCTGCTCTTGTCGATAAAGGCAAAGAGATGAGCAAGGCAGAGACTGAAGC
AGGGGATGTTGGTCCTGTTGTGACTGAAGTGGACATTCAACCCTTTGTCT
CCGCTTGGACGGGGCTTTCCGGGTGAAAAAAGCCTCAACTGATGAATCTG
ATCGCCTTCCTCAAAATGAAGAAAACCCTTTCCCAAAAAAGTTATTGGGT
CGGGATGAAGCTGGCCAAAGTATTAAACCGGGCATTCCGGGGGGACCGGG
TTGGAACTCAAAAACCCCCATTCAACCAATTTGGGAATTTTCTTTTTTTT
CGGGCCCCATGGGGGGGCCGGAAAACTGAACTTGGGCCAAAACCCGGGGG
GCTTATTATTTTTGGTTTTAAAGAGGGGCCCACGAAAACGGTTTGAAAAA
TAAAAGGAT
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