EY665753
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPA_ECO57 (ATP-dependent Clp protease ATP-binding subunit clpA OS=Escherichia coli O157:H7 GN=clpA PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.536e-26 Identity = 61/145 (42.07%), Postives = 94/145 (64.83%), Query Frame = 1 Query: 1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEE---ARELEKELRQITKEKNEAVRGQDFEKAGELRDR 426 L+ G++ IG+TT E+ EKD AL RRFQ + + EPS++ET+QI+ GL+ +YE HH +RYT +A+ +A +L+ +YI+DR LPDKAID+IDEAG+R RL ++ ++E + +I + ++V D + L DR Sbjct: 311 LSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDR 455
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_YEREN (Chaperone protein clpB OS=Yersinia enterocolitica GN=clpB PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.422e-26 Identity = 71/167 (42.51%), Postives = 99/167 (59.28%), Query Frame = 1 Query: 1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLK-AQISALVDKGKEMSKAETE 498 LARG+L IGATT E+++HIEKDPAL RRFQ ++V EP D I +L+GL E HH + DEAL +A +LS++YI R LPDKAI L+D A +RV + P E ++L + E + + Q F K + R ++ AQ SA +K ++ +AE E Sbjct: 332 LARGQLRTIGATTWSEFKRHIEKDPALTRRFQVLQVDEPDEDTAISMLRGLTPALEKHHGVWIMDEALQAAVRLSHRYIPARQLPDKAISLLDTACARVAVAQFSQPAELQQLTFQSETAQTELSSLEKAQHFGKGQDERTALLEATIAQHSAAANKLEQRWQAERE 498
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPV1_PSEAE (Protein clpV1 OS=Pseudomonas aeruginosa GN=clpV1 PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.590e-23 Identity = 71/192 (36.98%), Postives = 104/192 (54.17%), Query Frame = 1 Query: 1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARE-------LEKELRQITKE------------KNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV 519 LARG L + ATT EY+KHIEKDPAL RRFQ V+V EPS + I +++G+ E HH+++ DEAL +A +LS++YI R LPDK++ L+D A +R + +P E + LE EL I +E E + ++ E+ L R + K + L++ + +A EA D G V Sbjct: 334 LARGTLRTVAATTWAEYKKHIEKDPALTRRFQVVQVDEPSEHKAILMMRGVASTMEKHHQVQILDEALEAAVRLSHRYIPARQLPDKSVSLLDTACARTAISLHAVPAEVDDSRRRIEALETELAIIRRESAIGVATAERQRNAETLLAEERERLAALEQRWAEEKRLVDELLETRARL-RAAAEAVDAGGV 524
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPL_LACLA (ATP-dependent Clp protease ATP-binding subunit clpL OS=Lactococcus lactis subsp. lactis GN=clpL PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.998e-22 Identity = 82/257 (31.91%), Postives = 125/257 (48.64%), Query Frame = 1 Query: 13 ELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQPFVSAWTGLSG*KKPQLMNLIAFLKMKKTLSQKSYWVGMKLAKVLNRAFRGDRVGTQKPPFNQFGNFLFFRAPWGGRKTEL 783 +L IGATT DEYR I K+ AL RRF V + EP+ +T++IL+G++E YE HH + D+ +A S +YI +R LPDKAIDLID+ GS + L++ L+ + + A++ +DF KA +++ + K +I K + K DV V + P + + L NL LK+ ++ K++ +A R +R G + G+FLF P G KTEL Sbjct: 284 KLSVIGATTQDEYRNTILKNAALARRFNDVVINEPTAADTLRILQGIKELYEKHHHVVLPDDEKKAAVDYSIKYIHNRHLPDKAIDLIDDCGS---FSGKNSQTDVETLDQRLKNKRQLRRPAIKSEDFAKAADIKRVDRGTKQKIK----KTHQKEKITATIDDVAQSVERLTGIPV----SDMGANDIEHLKNLDKRLKVMVIGEDEA-------VKMVAKAIRRNRAGFSEGD-QPKGSFLFV-GPTGVGKTEL 520 The following BLAST results are available for this feature:
BLAST of EY665753 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 194
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665753 ID=EY665753; Name=EY665753; organism=Citrus sinensis; type=EST; length=859bpback to top |