EY665753

Overview
NameEY665753
Unique NameEY665753
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_MYCBO (Chaperone protein clpB OS=Mycobacterium bovis GN=clpB PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.431e-40
Identity = 123/318 (38.68%), Postives = 168/318 (52.83%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ-------ITKEKNEAVRGQDFEKAGELRDRE--------------------MDLKAQISAL--------------------------VDKGKEMSKAETEAGDVGPVVTEV---DIQPFVSAWTGLSG*KKPQLMNLIAFLKMKKTLSQKSYWVGMKLA-KVLNRAFRGDRVGTQKPPFNQFGNFLFFRAPWGGRKTEL 783
            LARGEL  +GATTLDEYRKHIEKD ALERRFQ V V EPSV++TI IL+GL++RYE+HH +R TD ALV+AA LS +YI+ RFLPDKAIDL+DEA SR+R+     P E  E+E+ +R+       ++KE++EA   +  +   EL D++                     DLK Q+ AL                          V+K  + +  + +A +   +  EV   DI   VSAWTG+   +  +       L+M+  L ++   +G K A   ++ A R  R G   P  N+      F  P G  KTEL
Sbjct:  304 LARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEVHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLVRRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQLEALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIADVVSAWTGIPAGRLLE-GETAKLLRMEDELGKRV--IGQKAAVTAVSDAVRRSRAGVSDP--NRPTGAFMFLGPTGVGKTEL 616          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_BRUME (Chaperone protein clpB OS=Brucella melitensis GN=clpB PE=3 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 1.869e-40
Identity = 85/161 (52.80%), Postives = 121/161 (75.16%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMS 483
            LARGEL C+GATTL+EYRK++EKD AL RRFQPV V EP+V++TI IL+GL+E+YE HHK+R +D ALV+AA LS +YI+DRFLPDKAIDL+DEA SR+R++    PEE  E+++ + Q+ K + EA++    E     +DR   ++ ++S L ++  E++
Sbjct:  304 LARGELHCVGATTLEEYRKYVEKDAALARRFQPVFVDEPTVEDTISILRGLKEKYEQHHKVRVSDSALVAAAMLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDEIDRRIMQL-KIEREALK---VETDAASKDRLQRIEKELSDLEEESAELT 460          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB1_STRAW (Chaperone protein clpB 1 OS=Streptomyces avermitilis GN=clpB1 PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.869e-40
Identity = 125/319 (39.18%), Postives = 166/319 (52.04%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKE-------------------------LRQITKEKNEAVRG---------QDFEKAGELRDREMDLKAQ--------------------ISALVDKGKEMSKAETEAGDVGPVVTEV---DIQPFVSAWTGLSG*KKPQLMNLIAFLKMKKTLSQKSYWVGMKLA-KVLNRAFRGDRVGTQKPPFNQFGNFLFFRAPWGGRKTEL 783
            LARGEL  +GATTLDEYR+ IEKDPALERRFQ V V EPSV++TI IL+GL+ RYE HHK++  D ALV+AA LS +YI+ RFLPDKAIDL+DEA SR+R+     P E  EL+++                         LR+   +K E +RG         Q   + GEL+++  +L+ Q                    I AL    +E S+AE EA     V  EV   DI   V +WTG+   +  +       L+M++ L  +   +G   A + ++ A R  R G   P     G+FLF   P G  KTEL
Sbjct:  305 LARGELRMVGATTLDEYRERIEKDPALERRFQQVLVAEPSVEDTIAILRGLKGRYEAHHKVQIADSALVAAAALSDRYITSRFLPDKAIDLVDEAASRLRMEIDSSPVEIDELQRQVDRLKMEELAIGKETDAASRERLEKLRRDLADKEEELRGLTARWEKEKQSLNRVGELKEKLDELRGQAERAQRDGDFDTASKLLYGEIPALERDLEEASEAEEEAARDTMVKEEVGPDDIADVVGSWTGIPAGRLLE-GETQKLLRMEEELGHR--LIGQSEAVQAVSDAVRRTRAGIADPD-RPTGSFLFL-GPTGVGKTEL 618          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_XYLFA (Chaperone protein clpB OS=Xylella fastidiosa GN=clpB PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.441e-40
Identity = 128/317 (40.38%), Postives = 168/317 (53.00%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ-------ITKEKNEAVRGQ--DFEKAGELRDREM-DLK---------AQISALVDKGKEMSKAETEAGD------------------------------------VGPVVTEVDIQPFVSAWTGLSG*KKPQLMNLIAFLKMKKTLSQKSYWVGMKLA-KVLNRAFRGDRVGTQKPPFNQFGNFLFFRAPWGGRKTEL 783
            LARGEL CIGATTLDEYRK+IEKD ALERRFQ V V EP+V++TI IL+GL+E+Y +HH +  TD A+V+AA LS +YI+DR LPDKAIDL+DEA SR+R+     PEE   LE+ L Q       + KEK+EA + +  D E+  E+ DRE  DL+          Q +  + +  E +K + EA                                      V   VT  +I   VS WTG+   K  +       L+M+  L ++   VG + A KV++ A R  R G   P     G+FLF   P G  KTEL
Sbjct:  303 LARGELHCIGATTLDEYRKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKEKYALHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASKQRLADLERDIEVLDREFSDLEEVWRSEKAALQGATKIKESIEQAKLDLEAAQRRQDYAKMSEIQYGVLPALEKQLVAASQAEQHDFTLVQEKVTAEEIAEVVSRWTGIPVSKMLE-GERDKLLRMEADLGRRV--VGQEEAIKVVSDAVRRSRTGLSDPN-RPSGSFLFL-GPTGVGKTEL 614          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_RHOBA (Chaperone protein clpB OS=Rhodopirellula baltica GN=clpB PE=3 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 2.441e-40
Identity = 89/178 (50.00%), Postives = 118/178 (66.29%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD 534
            LARG L CIGATTLDEYR+HIEKD ALERRFQPV V EP+V++T+ IL+GL+ RYE HH +R TD ALV+AA LS +YI+DRFLPDKAIDLIDEA SR+ +    +PE    L++ LRQ+     + V  Q+     +  + E ++++  + L    ++    +    DV  V  EVD
Sbjct:  304 LARGALRCIGATTLDEYRQHIEKDAALERRFQPVFVGEPNVEDTVAILRGLKPRYESHHGVRITDSALVAAANLSDRYIADRFLPDKAIDLIDEAASRLAMEKESVPEPIDRLQRRLRQLELVHRQLVDEQEASAVDKRVEVEEEMESAKAELASLKEQWETEKMGLDDVQSVRQEVD 481          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_PSESM (Chaperone protein clpB OS=Pseudomonas syringae pv. tomato GN=clpB PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.441e-40
Identity = 120/317 (37.85%), Postives = 168/317 (53.00%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRL--------------RHAQLPEEARELEKE-----LRQITKEKNEAVRGQ----DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV--------------------------------VTEVDIQPFVSAWTGLSG*KKPQLMNLIAFLKMKKTLSQKSYWVGMKLAKV-LNRAFRGDRVGTQKPPFNQFGNFLFFRAPWGGRKTEL 783
            LARGEL C+GATTL+EYR++IEKD ALERRFQ V V EPS ++TI IL+GL+ERYE+HHK+  TD A+++AA+LS++YI+DR LPDKAIDLIDEA SR+R+              R  QL  EA+ L+KE     ++++ K + E VR +    D E+       E+   AQI   +++ ++  +A    GD+  +                                VTE +I   VS WTG+   K  +       L+M+  L  +   +G + A V ++ A R  R G   P  N+      F  P G  KTEL
Sbjct:  303 LARGELHCVGATTLNEYRQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIKRLEKLQEEIVRLEKEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAELQYGIIPDLERSLQMVDQHGKPENQLLRSKVTEEEIAEVVSKWTGIPVSKMLE-GEREKLLRMETLLHNRV--IGQEEAVVAVSNAVRRSRAGLSDP--NRPSGSFMFLGPTGVGKTEL 614          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_PHOLL (Chaperone protein clpB OS=Photorhabdus luminescens subsp. laumondii GN=clpB PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.441e-40
Identity = 119/319 (37.30%), Postives = 169/319 (52.98%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPE--------------EARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETE-----------AGDVGPV--------------------------------VTEVDIQPFVSAWTGLSG*KKPQLMNLIAFLKMKKTLSQKSYWVGM-KLAKVLNRAFRGDRVGTQKPPFNQFGNFLFFRAPWGGRKTEL 783
            LARGEL C+GATTLDEYR++IEKD ALERRFQ V V EPSV++TI IL+GL+ERYE+HH ++ TD A+V+AA LS++YISDR LPDKAIDLIDEAG+ +R++    PE              E + L+KE    +K++ E +  +   K  E  + E + KA+ +AL   G +  KAE E           +GD+  +                                VT+ +I   ++ WTG+   +  +       L+M++ L ++   +G  +    ++ A R  R G   P     G+FLF   P G  KTEL
Sbjct:  303 LARGELHCVGATTLDEYRQYIEKDAALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRMLPDKAIDLIDEAGASLRMQMDSKPEALDRLERRVIQLKLEQQALKKESDDASKKRLEMLNEELLVKEREYSELEEEWKAEKAALT--GTQHIKAELENARISLEQARRSGDLAKMSEIQYGKIPGLEKQLAAATQAESKHMKLLRNKVTDAEIADILARWTGIPVARMLE-SEKDKLLRMEQELHKRV--IGQDEAVNAISNAIRRSRAGLADPN-RPIGSFLFL-GPTGVGKTEL 614          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_NEIMB (Chaperone protein clpB OS=Neisseria meningitidis serogroup B GN=clpB PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.188e-40
Identity = 94/183 (51.37%), Postives = 126/183 (68.85%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD--FEKAGELRDREMD-LKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 540
            LARGEL CIGATTLDEYR++IEKD ALERRFQ V V EPSV++TI IL+GL+ERYEIHH +  TD A+V+AA+LS +YI+DRFLPDKAIDLIDEA SRV++     PE   ++++ L Q+  EK    + +D   +K  EL D E++ L+ + + L +  K        A ++   + EV I+
Sbjct:  303 LARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIK 485          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_NEIMA (Chaperone protein clpB OS=Neisseria meningitidis serogroup A GN=clpB PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.188e-40
Identity = 94/183 (51.37%), Postives = 126/183 (68.85%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD--FEKAGELRDREMD-LKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 540
            LARGEL CIGATTLDEYR++IEKD ALERRFQ V V EPSV++TI IL+GL+ERYEIHH +  TD A+V+AA+LS +YI+DRFLPDKAIDLIDEA SRV++     PE   ++++ L Q+  EK    + +D   +K  EL D E++ L+ + + L +  K        A ++   + EV I+
Sbjct:  303 LARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIK 485          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_CORDI (Chaperone protein clpB OS=Corynebacterium diphtheriae GN=clpB PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.188e-40
Identity = 126/320 (39.38%), Postives = 167/320 (52.19%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ-------ITKEKNEAVR----------GQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEA------GDVGPV-------------------------------VTEVDIQPFVSAWTGLSG*KKPQ-----LMNLIAFLKMKKTLSQKSYWVGMKLAKVLNRAFRGDRVGTQKPPFNQFGNFLFFRAPWGGRKTEL 783
            LARGEL  +GATTLDEYRK+IEKD ALERRFQ V V EPSV++ + IL+GL+ERYE+HH +R  D ALV+AA LS +YI+ RFLPDKAIDL+DEA SR+R+     P+E  ELE+ +R+       ++KE + A +            + EK GEL  R  + K  I+ + +  +E+ +  +E+      GD G V                               VT   I   VSAWTG+   K  Q     L+N+ A L  K+ + Q    V       ++ A R  R G   P     G+FLF   P G  KTEL
Sbjct:  305 LARGELRLVGATTLDEYRKYIEKDAALERRFQQVFVGEPSVEDAVGILRGLKERYEVHHGVRIQDSALVAAATLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERIVRRLEIEEVALSKETDAASKDRLIKLRQELADEREKLGELVARWNNEKGAINKVREAKEELERLRSESEIAERDGDYGKVAELRYGRIPELEKQVAEAEEHTVETTMLSEEVTPDTIAEVVSAWTGIPAGKMLQGETEKLLNMEAELG-KRVVGQSEAVV------AVSDAVRRARAGVADPN-RPTGSFLFL-GPTGVGKTEL 615          
The following BLAST results are available for this feature:
BLAST of EY665753 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
CLPB_MYCBO1.431e-4038.68Chaperone protein clpB OS=Mycobacterium bovis GN=c... [more]
CLPB_BRUME1.869e-4052.80Chaperone protein clpB OS=Brucella melitensis GN=c... [more]
CLPB1_STRAW1.869e-4039.18Chaperone protein clpB 1 OS=Streptomyces avermitil... [more]
CLPB_XYLFA2.441e-4040.38Chaperone protein clpB OS=Xylella fastidiosa GN=cl... [more]
CLPB_RHOBA2.441e-4050.00Chaperone protein clpB OS=Rhodopirellula baltica G... [more]
CLPB_PSESM2.441e-4037.85Chaperone protein clpB OS=Pseudomonas syringae pv.... [more]
CLPB_PHOLL2.441e-4037.30Chaperone protein clpB OS=Photorhabdus luminescens... [more]
CLPB_NEIMB3.188e-4051.37Chaperone protein clpB OS=Neisseria meningitidis s... [more]
CLPB_NEIMA3.188e-4051.37Chaperone protein clpB OS=Neisseria meningitidis s... [more]
CLPB_CORDI3.188e-4039.38Chaperone protein clpB OS=Corynebacterium diphther... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-B11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665753 ID=EY665753; Name=EY665753; organism=Citrus sinensis; type=EST; length=859bp
CTTGCCCGAGGAGAGTTACCGTGTATTGGTGCCACAACACTAGATGAATA
TAGAAAGCACATTGAGAAAGATCCAGCATTAGAAAGACGATTCCAGCCAG
TTAAAGTGCCAGAACCGTCAGTGGATGAAACCATACAAATTTTGAAAGGG
CTTCGAGAGCGATATGAAATTCACCACAAGCTTCGTTACACTGATGAAGC
ACTAGTTTCTGCTGCTCAGTTGTCATACCAGTACATCAGTGACCGTTTTC
TCCCTGATAAAGCTATTGATTTGATTGATGAAGCTGGTTCTCGGGTTCGT
CTTCGTCATGCACAGCTCCCCGAGGAAGCTAGAGAGCTTGAAAAAGAGCT
CAGGCAGATAACTAAGGAGAAGAATGAGGCTGTTCGTGGCCAAGACTTTG
AAAAGGCTGGAGAGTTACGTGATAGAGAAATGGACCTTAAGGCTCAGATA
TCTGCTCTTGTCGATAAAGGCAAAGAGATGAGCAAGGCAGAGACTGAAGC
AGGGGATGTTGGTCCTGTTGTGACTGAAGTGGACATTCAACCCTTTGTCT
CCGCTTGGACGGGGCTTTCCGGGTGAAAAAAGCCTCAACTGATGAATCTG
ATCGCCTTCCTCAAAATGAAGAAAACCCTTTCCCAAAAAAGTTATTGGGT
CGGGATGAAGCTGGCCAAAGTATTAAACCGGGCATTCCGGGGGGACCGGG
TTGGAACTCAAAAACCCCCATTCAACCAATTTGGGAATTTTCTTTTTTTT
CGGGCCCCATGGGGGGGCCGGAAAACTGAACTTGGGCCAAAACCCGGGGG
GCTTATTATTTTTGGTTTTAAAGAGGGGCCCACGAAAACGGTTTGAAAAA
TAAAAGGAT
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