EY665753

Overview
NameEY665753
Unique NameEY665753
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_CLOPE (Chaperone protein clpB OS=Clostridium perfringens GN=clpB PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.188e-40
Identity = 88/174 (50.57%), Postives = 120/174 (68.97%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMS-KAETEAGDVGPV 519
            LARGEL CIGATT DEYR++IEKD ALERRFQPV V EP+V+ET+ IL+GL+ER+EIHH +R  D A+V+AA+LS++YI DR+LPDKAIDLIDEAG+ +R     LP E   + +++  +  EK    +  D       ++R + L+ +++ L DK  EM+ K E E   +  V
Sbjct:  308 LARGELHCIGATTFDEYRQYIEKDKALERRFQPVIVEEPTVEETVSILRGLKERFEIHHGIRIHDSAIVAAAKLSHRYIQDRYLPDKAIDLIDEAGAMIRSEIDSLPTELDIIRRKILMLETEKEALSKEND----DASKERLVALEKELAELQDKNDEMTIKYEKEKSHISAV 477          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_BRUSU (Chaperone protein clpB OS=Brucella suis GN=clpB PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.188e-40
Identity = 85/161 (52.80%), Postives = 120/161 (74.53%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMS 483
            LARGEL C+GATTL+EYRK++EKD AL RRFQPV V EP+V++TI IL+GL+E+YE HHK+R +D ALV+AA LS +YI+DRFLPDKAIDL+DEA SR+R+     PEE  E+++ + Q+ K + EA++    E     +DR   ++ ++S L ++  E++
Sbjct:  304 LARGELHCVGATTLEEYRKYVEKDAALARRFQPVFVDEPTVEDTISILRGLKEKYEQHHKVRVSDSALVAAATLSNRYITDRFLPDKAIDLVDEAASRLRMHVDSKPEELDEIDRRIMQL-KIEREALK---VETDAASKDRLQRIEKELSDLEEESAELT 460          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB2_SYNE7 (Chaperone protein clpB 2 OS=Synechococcus elongatus (strain PCC 7942) GN=clpB2 PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.188e-40
Identity = 121/327 (37.00%), Postives = 169/327 (51.68%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI-----------------------------TKEKNEAVRGQDF-------EKAGELRDREMDLKAQISAL-----VDKGKEMSKAETEAGD--------------------VGPVVTEVDIQPFVSAWTG-----LSG*KKPQLMNLIAFLKMKKTLSQKSYWVGMKLAKVLNRAFRGDRVGTQKPPFNQFGNFLFFRAPWGGRKTEL 783
            LARGEL CIGATT DEYR+ IEKDPALERRFQ V V +PSV++TI IL+GL+ERYE HH ++ TD AL++AA+LS++YISDRFLPDKAIDLIDEA +++++     P E  +LE+ L Q+                             T ++ +A   Q +       E+ G L++ E  L+ Q++       ++KG E+   + EA                      +   V E DI   V+ WT      L   ++ +L+ L +FL  ++ + Q    V   +A  + RA  G      K P    G+FLF   P G  KTEL
Sbjct:  309 LARGELRCIGATTTDEYRRTIEKDPALERRFQQVYVSQPSVEDTIAILRGLKERYEGHHGVKITDGALMAAAKLSHRYISDRFLPDKAIDLIDEASAQLKMEITSKPSELEDLERRLLQLEMEQLSLSGENGQASVHSDRLQQIQTELQTLQEQQARLNQQWQQEKQLLEELGRLQEEEETLRQQVNQAEREHDLNKGAELKFGQLEALQQQRQAIEEQIQALHANGQTLLREQVEEADIAEIVARWTNIPVQRLLESERQKLLQLESFLH-QRVIGQDEAVVA--VAAAIRRARAG-----MKDPSRPIGSFLFL-GPTGVGKTEL 626          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB2_CHLTE (Probable chaperone protein clpB 2 OS=Chlorobium tepidum GN=clpB2 PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.188e-40
Identity = 87/139 (62.59%), Postives = 110/139 (79.14%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGEL 417
            LARGEL CIGATTLDEYRKHIEKD ALERRFQ V V +PSV++T+ IL+GL+E+YEIHH +R  D ALV+AA+LS +YI+DRFLPDKAIDLIDEA SR+RL     PEE   + +ELR++  E+ EA++ ++ E  G +
Sbjct:  306 LARGELRCIGATTLDEYRKHIEKDAALERRFQTVIVDQPSVEDTVSILRGLKEKYEIHHGVRIKDAALVAAAELSNRYIADRFLPDKAIDLIDEACSRLRLEIDSEPEELDRINRELRRLEIER-EALK-RELEATGSV 442          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB1_SYNPX (Chaperone protein clpB 1 OS=Synechococcus sp. (strain WH8102) GN=clpB1 PE=3 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 3.188e-40
Identity = 119/320 (37.19%), Postives = 169/320 (52.81%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF----------EKAGELRDREMDLKA----------QISAL----------VDKGK---EMSK-AETEAGDVGPV-------------------------VTEVDIQPFVSAWTGLSG*KKPQLMNLIAFLKMKKTLSQKSYWVGMKLAKVLNRAFRGDRVGTQKPPFNQFGNFLFFRAPWGGRKTEL 783
            LARGEL CIGATTLDE+R+HIEKDPALERRFQ V V +P+V +TI IL+GL+ERYE+HH +R  D ALV+AA LS +YI+DRFLPDKAIDL+DE+ +R+++     PE+  E+++++ Q+  EK    R  D            +  EL +++  L A          Q+SAL          V++ K   +++K AE E G +  +                         VTE DI   ++ WTG+   +  Q   +   L+++  L Q+       +  V + A +  R G   P      +FLF   P G  KTEL
Sbjct:  304 LARGELRCIGATTLDEHRQHIEKDPALERRFQQVLVDQPTVPDTISILRGLKERYEVHHGVRIADSALVAAAMLSSRYITDRFLPDKAIDLVDESAARLKMEITSKPEQIDEIDRKILQLEMEKLSLGRESDSASQERLQRIERELAELGEQQSSLNAQWQSEKGAIDQLSALKEEIERVQLQVEQAKRNYDLNKAAELEYGTLATLQRQLQEQEDLLEDEDGTDKTLLREEVTEDDIAEVIAKWTGIPVARLVQ-SEMEKLLQLEDDLHQRVIGQNQAVTAVAD-AIQRSRAGLSDPN-RPIASFLFL-GPTGVGKTEL 619          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_XYLFT (Chaperone protein clpB OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=clpB PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.164e-40
Identity = 128/317 (40.38%), Postives = 167/317 (52.68%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQ-------ITKEKNEAVRGQ--DFEKAGELRDREM-DLK---------AQISALVDKGKEMSKAETEAGD------------------------------------VGPVVTEVDIQPFVSAWTGLSG*KKPQLMNLIAFLKMKKTLSQKSYWVGMKLA-KVLNRAFRGDRVGTQKPPFNQFGNFLFFRAPWGGRKTEL 783
            LARGEL CIGATTLDEYRK+IEKD ALERRFQ V V EP+V++TI IL+GL+E+Y +HH +  TD A+V+AA LS +YI+DR LPDKAIDL+DEA SR+R+     PEE   LE+ L Q       + KEK+EA + +  D E+  E+ DRE  DL+          Q +  + +  E +K + EA                                      V   VT  +I   VS WTG+   K  +       L+M+  L ++   VG   A KV++ A R  R G   P     G+FLF   P G  KTEL
Sbjct:  303 LARGELHCIGATTLDEYRKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKEKYALHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASKQRLVDLERDIEVLDREFSDLEEVWRSEKAALQGATKIKESIEQAKLDLEAAQRRQDYAKMSEIQYGVLPALEKQLVAASQAEQHDFTLVQEKVTAEEIAEVVSRWTGIPVSKMLE-GERDKLLRMEADLGRRV--VGQDEAIKVVSDAVRRSRTGLSDPN-RPSGSFLFL-GPTGVGKTEL 614          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_PROMP (Chaperone protein clpB OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=clpB PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.164e-40
Identity = 87/181 (48.07%), Postives = 123/181 (67.96%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD---FEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD 534
            LARGEL CIGATT++E++++IEKDPALERRFQ +K+  PSVD+TI IL+GLRE+YE+HH +R +D ALV+AA LS +YI+DRFLPDKAIDLIDEA SR+ +     PEE  E+++++ Q+  E     R  D    E+   + +   DLK + S L     +  K + E  ++  +  E++
Sbjct:  301 LARGELRCIGATTINEHKQNIEKDPALERRFQKIKINAPSVDDTISILRGLREKYEVHHSVRISDNALVAAASLSERYINDRFLPDKAIDLIDEAASRLNMIITSKPEEIDEIDRKVLQLEMENLSLQRESDNFSLERLKRINNELHDLKIRQSEL---NHQWQKEKEEIDEISNLKEEIE 478          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_MEIRU (Chaperone protein clpB OS=Meiothermus ruber GN=clpB PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 5.438e-40
Identity = 125/327 (38.23%), Postives = 172/327 (52.60%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRL------------------------------------RHAQLPEEARELEKELR------------------------QITKEKNEAVRGQDFEKAGELRDREM-DLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQPFVSAWTGLSG*K-----KPQLMNLIAFLKMKKTLSQKSYWVGMKLAKVLNRAFRGDRVGTQKPPFNQFGNFLFFRAPWGGRKTEL 783
            LARGEL  IGATTLDEYR+ IEKDPALERRFQPV V EPS++ET+ IL+G++E+YE+HH +R +D AL++AAQLS++YI+DR LPDKAIDL+DEA +R+R+                                    R  +L +E  +LE+E+R                        ++  +  +A R  D  KA  LR  E+  L+ +++ L D+   M+ A+     V P+VTE DI   VS WTG+   K     + +L+ L   L  K+ + Q    V   +A  + RA  G      K P    G+FLF   P G  KTEL
Sbjct:  295 LARGELHLIGATTLDEYRE-IEKDPALERRFQPVFVDEPSLEETVSILRGIKEKYEVHHGVRISDPALIAAAQLSHRYIADRKLPDKAIDLVDEAAARLRMALESSPESIDALNRRKLQLEIEREALKKETDAESKFRLGELEKEIADLEEEIRKQQAEWEAEREIMQKLRAAQQRLDEVRTQIEQAERAYDLNKAAPLRYGELPKLEQEVNELADR---MAGAQF----VRPMVTEEDIAAIVSRWTGIPVAKLMEGEREKLLRLEDELH-KRVVGQDEAIVA--VADAIRRARAG-----LKDPNRPIGSFLFL-GPTGVGKTEL 604          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_CORGL (Chaperone protein clpB OS=Corynebacterium glutamicum GN=clpB PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 5.438e-40
Identity = 122/318 (38.36%), Postives = 167/318 (52.52%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI--------------TKEKNEAVRGQ---DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEA------GDVGPV---------------------------------VTEVDIQPFVSAWTGLSG*KKPQLMNLIAFLKMKKTLSQKSYWVG-MKLAKVLNRAFRGDRVGTQKPPFNQFGNFLFFRAPWGGRKTEL 783
            LARGEL  +GATTL+EYRK+IEKD ALERRFQ V V EP+V++ I IL+GL+ERYE+HH +R  D ALV+AA+LS +YI+ RFLPDKAIDL+DEA SR+R+     P+E  ELE+ +R++              +KE+ E +R +   + EK  EL+ R  + K  I  + +  +E+    +E+      G+ G V                                 VT   I   VSAWTG+   K  Q       L M++ L  +   VG ++    ++ A R  R G   P     G+FLF   P G  KTEL
Sbjct:  305 LARGELRLVGATTLNEYRKYIEKDAALERRFQQVYVGEPTVEDAIGILRGLKERYEVHHGVRIQDSALVAAAELSNRYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERIVRRLEIEEMALSKESDAASKERLEKLRSELADEREKLSELKARWQNEKTAIDDVREMKEELEALRSESDIAERDGNYGRVAELRYGRIPELEKQIEDAESKVEVNENAMLTEEVTPDTIADVVSAWTGIPAGKMMQ-GETEKLLNMERVLGNRV--VGQLEAVTAVSDAVRRSRAGVADPN-RPTGSFLFL-GPTGVGKTEL 617          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB1_THEEB (Chaperone protein clpB 1 OS=Thermosynechococcus elongatus (strain BP-1) GN=clpB1 PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 5.438e-40
Identity = 88/172 (51.16%), Postives = 123/172 (71.51%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMS---KAETEAGD 507
            LARGEL CIGATTLDEYRK+IEKD ALERRFQ V V +PSV++TI IL+GL+ERYEIHH ++ +D ALV+AA LS +YISDRFLPDKAIDL+DEA +++++     PEE  E+++++ Q+  E+    +    E +   RDR   L+ +++ L ++   ++   +AE E  D
Sbjct:  304 LARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPSVEDTISILRGLKERYEIHHGVKISDTALVAAATLSARYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEIDRKILQLEMERLSLQK----ETSAASRDRLEKLERELADLKEEQSRLNAQWQAEKEVID 471          
The following BLAST results are available for this feature:
BLAST of EY665753 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
CLPB_CLOPE3.188e-4050.57Chaperone protein clpB OS=Clostridium perfringens ... [more]
CLPB_BRUSU3.188e-4052.80Chaperone protein clpB OS=Brucella suis GN=clpB PE... [more]
CLPB2_SYNE73.188e-4037.00Chaperone protein clpB 2 OS=Synechococcus elongatu... [more]
CLPB2_CHLTE3.188e-4062.59Probable chaperone protein clpB 2 OS=Chlorobium te... [more]
CLPB1_SYNPX3.188e-4037.19Chaperone protein clpB 1 OS=Synechococcus sp. (str... [more]
CLPB_XYLFT4.164e-4040.38Chaperone protein clpB OS=Xylella fastidiosa (stra... [more]
CLPB_PROMP4.164e-4048.07Chaperone protein clpB OS=Prochlorococcus marinus ... [more]
CLPB_MEIRU5.438e-4038.23Chaperone protein clpB OS=Meiothermus ruber GN=clp... [more]
CLPB_CORGL5.438e-4038.36Chaperone protein clpB OS=Corynebacterium glutamic... [more]
CLPB1_THEEB5.438e-4051.16Chaperone protein clpB 1 OS=Thermosynechococcus el... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-B11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665753 ID=EY665753; Name=EY665753; organism=Citrus sinensis; type=EST; length=859bp
CTTGCCCGAGGAGAGTTACCGTGTATTGGTGCCACAACACTAGATGAATA
TAGAAAGCACATTGAGAAAGATCCAGCATTAGAAAGACGATTCCAGCCAG
TTAAAGTGCCAGAACCGTCAGTGGATGAAACCATACAAATTTTGAAAGGG
CTTCGAGAGCGATATGAAATTCACCACAAGCTTCGTTACACTGATGAAGC
ACTAGTTTCTGCTGCTCAGTTGTCATACCAGTACATCAGTGACCGTTTTC
TCCCTGATAAAGCTATTGATTTGATTGATGAAGCTGGTTCTCGGGTTCGT
CTTCGTCATGCACAGCTCCCCGAGGAAGCTAGAGAGCTTGAAAAAGAGCT
CAGGCAGATAACTAAGGAGAAGAATGAGGCTGTTCGTGGCCAAGACTTTG
AAAAGGCTGGAGAGTTACGTGATAGAGAAATGGACCTTAAGGCTCAGATA
TCTGCTCTTGTCGATAAAGGCAAAGAGATGAGCAAGGCAGAGACTGAAGC
AGGGGATGTTGGTCCTGTTGTGACTGAAGTGGACATTCAACCCTTTGTCT
CCGCTTGGACGGGGCTTTCCGGGTGAAAAAAGCCTCAACTGATGAATCTG
ATCGCCTTCCTCAAAATGAAGAAAACCCTTTCCCAAAAAAGTTATTGGGT
CGGGATGAAGCTGGCCAAAGTATTAAACCGGGCATTCCGGGGGGACCGGG
TTGGAACTCAAAAACCCCCATTCAACCAATTTGGGAATTTTCTTTTTTTT
CGGGCCCCATGGGGGGGCCGGAAAACTGAACTTGGGCCAAAACCCGGGGG
GCTTATTATTTTTGGTTTTAAAGAGGGGCCCACGAAAACGGTTTGAAAAA
TAAAAGGAT
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