EY665753

Overview
NameEY665753
Unique NameEY665753
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_CHRVO (Chaperone protein clpB OS=Chromobacterium violaceum GN=clpB PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.066e-39
Identity = 92/167 (55.09%), Postives = 119/167 (71.26%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEA 501
            LARGEL CIGATTLDEYRK+IEKD ALERRFQ V V EPSV++TI IL+GL+E+YEIHH +  TD A+V+AA+LS +YI+DRFLPDKAIDLIDEA SR+++     PE   +L++ L Q+ K + EAV  +  E + +      D  A++S      +E+ KAE  A
Sbjct:  303 LARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQEKYEIHHGVDITDPAIVAAAELSQRYITDRFLPDKAIDLIDEAASRIKMELDSKPEAMDKLDRRLIQL-KIEREAVNKESDEASQKRLKLIEDEIAELSREYADLEEIWKAEKAA 468          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_RICPR (Chaperone protein clpB OS=Rickettsia prowazekii GN=clpB PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.699e-39
Identity = 87/170 (51.18%), Postives = 121/170 (71.18%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDV 510
            LARGEL CIGATTLDEYRK+IEKD AL RRFQPV V EPSV++TI IL+G++E+YE+HH +R +D A+V+AA LS +YI+DR+LPDKAIDLIDEA SR+++  +  PEE  EL++ + QI             E A   ++ +   K +I++L +   E+ K E+++ D+
Sbjct:  304 LARGELHCIGATTLDEYRKYIEKDAALARRFQPVYVGEPSVEDTISILRGIKEKYELHHAVRISDSAIVAAATLSNRYITDRYLPDKAIDLIDEACSRMKIELSSKPEELDELDRRIIQI-----------KIELAALKKENDEHSKKKITSLTE---ELKKLESKSYDM 459          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_RALSO (Chaperone protein clpB OS=Ralstonia solanacearum GN=clpB PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.699e-39
Identity = 95/180 (52.78%), Postives = 128/180 (71.11%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFE---KAGELRDREMD-LKAQISALVDKGKEMSKAETEAGDVGPVVTE 528
            LARGEL CIGATTLDEYRK+IEKD ALERRFQ V V EPSV+ TI IL+GL+E+YE+HH +  TD A+V+AA+LS++YI+DRFLPDKAIDLIDEA +R+++     PE   +L++ L Q+ K + EAV+ +  E   K  EL ++E++ L+ + + L    +E+ KAE  A      V E
Sbjct:  302 LARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAARIKMEIDSKPEAMDKLDRRLIQL-KIEREAVKKETDEASQKRLELIEQEIERLQKEYADL----EEIWKAEKGAAQGAAAVKE 476          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_PROMA (Chaperone protein clpB OS=Prochlorococcus marinus GN=clpB PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.699e-39
Identity = 84/183 (45.90%), Postives = 128/183 (69.95%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDF---EKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQ 540
            LARGEL CIGATT++E+R+HIEKDPALERRFQ V + EPS+++TI IL+GL+E+YE+HH +R +D ALV+AA LS +YIS+R+LPDKAIDLIDE+ S++++     PEE  E+++++ Q+  EK    R  +    EK   + +   +LK++ S+L  + +E  ++      +   + +V +Q
Sbjct:  304 LARGELRCIGATTINEHRQHIEKDPALERRFQQVLISEPSIEDTISILRGLKEKYEVHHGVRISDSALVAAAVLSNRYISERYLPDKAIDLIDESASKLKMEITSKPEELDEIDRKIIQLQMEKLSLKRESNLASQEKLNAIDNGLNELKSKQSSLNKQWQEEKESINTLSFLKEEIEKVQLQ 486          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_MYCPA (Chaperone protein clpB OS=Mycobacterium paratuberculosis GN=clpB PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.699e-39
Identity = 124/318 (38.99%), Postives = 169/318 (53.14%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI--------------TKEKNEAVRGQ---DFEKAGELRDR----------EMDLKAQISAL--------------------------VDKGKEMSKAETEAGDVGPVVTEV---DIQPFVSAWTGLSG*KKPQLMNLIAFLKMKKTLSQKSYWVGMKLA-KVLNRAFRGDRVGTQKPPFNQFGNFLFFRAPWGGRKTEL 783
            LARGEL  +GATTLDEYRK+IEKD ALERRFQ V V EPSV++T+ IL+GL++RYE+HH +R TD ALV+AA LS +YI+ RFLPDKAIDL+DEA SR+++     P E  E+E+ +R++              +KE+ E +R +     EK  EL  R            +LK Q+  L                          V+K  E +  + EA +   +  EV   DI   VSAWTG+   +  +       L+M+  L ++   VG K A + ++ A R  R G   P     G+F+F   P G  KTEL
Sbjct:  304 LARGELRLVGATTLDEYRKYIEKDAALERRFQQVFVGEPSVEDTVGILRGLKDRYEVHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLKMEIDSRPVEIDEVERLVRRLEIEEMALAKEEDEASKERLEKLRSELADQKEKLAELTTRWQNEKNAIDVVRELKEQLETLRGESDRAERDGDLAKAAELRYGRIPEVEKKLEAALPQAEARENVMLKEEVGPDDIAEVVSAWTGIPAGRMLE-GETAKLLRMEDELGKRV--VGQKRAVQAVSDAVRRARAGVADPN-RPTGSFMFL-GPTGVGKTEL 616          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_XANAC (Chaperone protein clpB OS=Xanthomonas axonopodis pv. citri GN=clpB PE=3 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 3.525e-39
Identity = 125/317 (39.43%), Postives = 161/317 (50.79%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDL--------------KAQISAL-----VDKGKEMSKAETEAGD------------------------------------VGPVVTEVDIQPFVSAWTGLSG*KKPQLMNLIAFLKMKKTLSQKSYWVGMKLA-KVLNRAFRGDRVGTQKPPFNQFGNFLFFRAPWGGRKTEL 783
            LARGEL CIGATTLDEYRK+IEKD ALERRFQ V V EP+V++TI IL+GL+ERY +HH +  TD A+V+AA LS +YI+DR LPDKAIDL+DEA SR+R+     PEE   LE+ L Q+  ++    + +D      L D E D+              K++ +AL     V +  E +K E EA                                      V   VT  +I   VS WTG+   K  +       L+M+  L  +   VG   A KV++ A R  R G   P     G+FLF   P G  KTEL
Sbjct:  303 LARGELHCIGATTLDEYRKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDDASRQRLADLETDIDKLEREFYDLNELWKSEKAALQGTTKVKEQIEHAKLELEAAQRRQDYAKMSEIQYGVLPQLEKQMALANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLE-GERDKLLRMEDELHHRV--VGQNEAIKVVSDAVRRSRAGLSDPN-RPSGSFLFL-GPTGVGKTEL 614          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_RICTY (Chaperone protein clpB OS=Rickettsia typhi GN=clpB PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.525e-39
Identity = 85/166 (51.20%), Postives = 115/166 (69.28%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETE 498
            LARGEL CIGATTLDEYRK+IEKD AL RRFQPV V EPSV++TI IL+G++E+YE+HH +R +D A+V+AA LS +YI+DR+LPDKAIDLIDEA SR+++  +  PEE  EL++ + QI  E     +  D     ++     +LK   S   D   +   A+++
Sbjct:  304 LARGELHCIGATTLDEYRKYIEKDAALARRFQPVYVGEPSVEDTISILRGIKEKYELHHAVRISDSAIVAAATLSNRYITDRYLPDKAIDLIDEACSRMKIELSSKPEELDELDRRIIQIKIELAALKKENDEHSKKKITSLTEELKQLDSKSYDMNTKWQAAKSK 469          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_SHIFL (Chaperone protein clpB OS=Shigella flexneri GN=clpB PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.603e-39
Identity = 86/166 (51.81%), Postives = 118/166 (71.08%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETE 498
            LARGEL C+GATTLDEYR++IEKD ALERRFQ V V EPSV++TI IL+GL+ERYE+HH ++ TD A+V+AA LS++YI+DR LPDKAIDLIDEA S +R++    PEE   L++ + Q+  E+   ++  D     E   + +D+  +   L DK ++ S+ E E
Sbjct:  303 LARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESD-----EASKKRLDMLNE--ELSDKERQYSELEEE 461          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_ECOLI (Chaperone protein clpB OS=Escherichia coli (strain K12) GN=clpB PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.603e-39
Identity = 86/166 (51.81%), Postives = 118/166 (71.08%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETE 498
            LARGEL C+GATTLDEYR++IEKD ALERRFQ V V EPSV++TI IL+GL+ERYE+HH ++ TD A+V+AA LS++YI+DR LPDKAIDLIDEA S +R++    PEE   L++ + Q+  E+   ++  D     E   + +D+  +   L DK ++ S+ E E
Sbjct:  303 LARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESD-----EASKKRLDMLNE--ELSDKERQYSELEEE 461          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_ECOL6 (Chaperone protein clpB OS=Escherichia coli O6 GN=clpB PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.603e-39
Identity = 86/166 (51.81%), Postives = 118/166 (71.08%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETE 498
            LARGEL C+GATTLDEYR++IEKD ALERRFQ V V EPSV++TI IL+GL+ERYE+HH ++ TD A+V+AA LS++YI+DR LPDKAIDLIDEA S +R++    PEE   L++ + Q+  E+   ++  D     E   + +D+  +   L DK ++ S+ E E
Sbjct:  303 LARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESD-----EASKKRLDMLNE--ELSDKERQYSELEEE 461          
The following BLAST results are available for this feature:
BLAST of EY665753 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
CLPB_CHRVO2.066e-3955.09Chaperone protein clpB OS=Chromobacterium violaceu... [more]
CLPB_RICPR2.699e-3951.18Chaperone protein clpB OS=Rickettsia prowazekii GN... [more]
CLPB_RALSO2.699e-3952.78Chaperone protein clpB OS=Ralstonia solanacearum G... [more]
CLPB_PROMA2.699e-3945.90Chaperone protein clpB OS=Prochlorococcus marinus ... [more]
CLPB_MYCPA2.699e-3938.99Chaperone protein clpB OS=Mycobacterium paratuberc... [more]
CLPB_XANAC3.525e-3939.43Chaperone protein clpB OS=Xanthomonas axonopodis p... [more]
CLPB_RICTY3.525e-3951.20Chaperone protein clpB OS=Rickettsia typhi GN=clpB... [more]
CLPB_SHIFL4.603e-3951.81Chaperone protein clpB OS=Shigella flexneri GN=clp... [more]
CLPB_ECOLI4.603e-3951.81Chaperone protein clpB OS=Escherichia coli (strain... [more]
CLPB_ECOL64.603e-3951.81Chaperone protein clpB OS=Escherichia coli O6 GN=c... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-B11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665753 ID=EY665753; Name=EY665753; organism=Citrus sinensis; type=EST; length=859bp
CTTGCCCGAGGAGAGTTACCGTGTATTGGTGCCACAACACTAGATGAATA
TAGAAAGCACATTGAGAAAGATCCAGCATTAGAAAGACGATTCCAGCCAG
TTAAAGTGCCAGAACCGTCAGTGGATGAAACCATACAAATTTTGAAAGGG
CTTCGAGAGCGATATGAAATTCACCACAAGCTTCGTTACACTGATGAAGC
ACTAGTTTCTGCTGCTCAGTTGTCATACCAGTACATCAGTGACCGTTTTC
TCCCTGATAAAGCTATTGATTTGATTGATGAAGCTGGTTCTCGGGTTCGT
CTTCGTCATGCACAGCTCCCCGAGGAAGCTAGAGAGCTTGAAAAAGAGCT
CAGGCAGATAACTAAGGAGAAGAATGAGGCTGTTCGTGGCCAAGACTTTG
AAAAGGCTGGAGAGTTACGTGATAGAGAAATGGACCTTAAGGCTCAGATA
TCTGCTCTTGTCGATAAAGGCAAAGAGATGAGCAAGGCAGAGACTGAAGC
AGGGGATGTTGGTCCTGTTGTGACTGAAGTGGACATTCAACCCTTTGTCT
CCGCTTGGACGGGGCTTTCCGGGTGAAAAAAGCCTCAACTGATGAATCTG
ATCGCCTTCCTCAAAATGAAGAAAACCCTTTCCCAAAAAAGTTATTGGGT
CGGGATGAAGCTGGCCAAAGTATTAAACCGGGCATTCCGGGGGGACCGGG
TTGGAACTCAAAAACCCCCATTCAACCAATTTGGGAATTTTCTTTTTTTT
CGGGCCCCATGGGGGGGCCGGAAAACTGAACTTGGGCCAAAACCCGGGGG
GCTTATTATTTTTGGTTTTAAAGAGGGGCCCACGAAAACGGTTTGAAAAA
TAAAAGGAT
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