EY665753

Overview
NameEY665753
Unique NameEY665753
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_ECO57 (Chaperone protein clpB OS=Escherichia coli O157:H7 GN=clpB PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.603e-39
Identity = 86/166 (51.81%), Postives = 118/166 (71.08%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETE 498
            LARGEL C+GATTLDEYR++IEKD ALERRFQ V V EPSV++TI IL+GL+ERYE+HH ++ TD A+V+AA LS++YI+DR LPDKAIDLIDEA S +R++    PEE   L++ + Q+  E+   ++  D     E   + +D+  +   L DK ++ S+ E E
Sbjct:  303 LARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESD-----EASKKRLDMLNE--ELSDKERQYSELEEE 461          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_CLOAB (Chaperone protein clpB OS=Clostridium acetobutylicum GN=clpB PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.603e-39
Identity = 86/161 (53.42%), Postives = 115/161 (71.43%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMS 483
            LARGEL CIGATT DEYRK+IEKD ALERRFQ V++ EP+VD+ I IL+GL+ER+EIHH +R  D A+V+AA+LS +YI+ RFLPDKAIDLIDEAG+ VR+    +P E   L++++ Q+  EK    +  D       R+R   ++ ++S L DK K M+
Sbjct:  307 LARGELHCIGATTFDEYRKYIEKDKALERRFQKVQIDEPTVDDAISILRGLKERFEIHHGVRIHDNAIVAAAKLSDRYITGRFLPDKAIDLIDEAGAMVRMEIDSMPTELDMLKRKIFQMEIEKEALSKESDKFS----RERLESIQKELSDLKDKDKAMT 463          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_BORPE (Chaperone protein clpB OS=Bordetella pertussis GN=clpB PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.603e-39
Identity = 88/167 (52.69%), Postives = 116/167 (69.46%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEA 501
            LARGEL CIGATTLDEYRK+IEKD ALERRFQ V V EP V+ TI IL+GL+ERYE+HH +  TD A+V+AA+LS++YI+DRFLPDKAIDLIDEAG+R+R+     PE    L++ + Q+  E+    +  D      L   E +L+ ++    +  +E+ KAE  A
Sbjct:  302 LARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVGEPDVESTIAILRGLQERYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAGARIRMEIDSKPEVMDRLDRRIIQLKIEREAVKKETDDASMRRLAVIEEELE-KLQREYNDYEEIWKAEKAA 467          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_BORPA (Chaperone protein clpB OS=Bordetella parapertussis GN=clpB PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.603e-39
Identity = 88/167 (52.69%), Postives = 116/167 (69.46%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEA 501
            LARGEL CIGATTLDEYRK+IEKD ALERRFQ V V EP V+ TI IL+GL+ERYE+HH +  TD A+V+AA+LS++YI+DRFLPDKAIDLIDEAG+R+R+     PE    L++ + Q+  E+    +  D      L   E +L+ ++    +  +E+ KAE  A
Sbjct:  302 LARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVGEPDVESTIAILRGLQERYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAGARIRMEIDSKPEVMDRLDRRIIQLKIEREAVKKETDDASMRRLAVIEEELE-KLQREYNDYEEIWKAEKAA 467          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_BORBR (Chaperone protein clpB OS=Bordetella bronchiseptica GN=clpB PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.603e-39
Identity = 88/167 (52.69%), Postives = 116/167 (69.46%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEA 501
            LARGEL CIGATTLDEYRK+IEKD ALERRFQ V V EP V+ TI IL+GL+ERYE+HH +  TD A+V+AA+LS++YI+DRFLPDKAIDLIDEAG+R+R+     PE    L++ + Q+  E+    +  D      L   E +L+ ++    +  +E+ KAE  A
Sbjct:  302 LARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVGEPDVESTIAILRGLQERYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAGARIRMEIDSKPEVMDRLDRRIIQLKIEREAVKKETDDASMRRLAVIEEELE-KLQREYNDYEEIWKAEKAA 467          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_VIBVY (Chaperone protein clpB OS=Vibrio vulnificus (strain YJ016) GN=clpB PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 6.012e-39
Identity = 85/164 (51.83%), Postives = 118/164 (71.95%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAE 492
            LARGEL C+GATTLDEYR++IEKDPALERRFQ V V EP+V++TI IL+GL+ERYE+HH +  TD A+V+AA LS++Y+SDR LPDKAIDLIDEA S +R++    PE   +LE+++ Q+  E  +     + ++A E R R ++       L +K +E ++ E
Sbjct:  303 LARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIE--QQALSNEHDEASEKRLRSLN-----EELNEKEREFAELE 459          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_VIBVU (Chaperone protein clpB OS=Vibrio vulnificus GN=clpB PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 6.012e-39
Identity = 85/164 (51.83%), Postives = 118/164 (71.95%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAE 492
            LARGEL C+GATTLDEYR++IEKDPALERRFQ V V EP+V++TI IL+GL+ERYE+HH +  TD A+V+AA LS++Y+SDR LPDKAIDLIDEA S +R++    PE   +LE+++ Q+  E  +     + ++A E R R ++       L +K +E ++ E
Sbjct:  303 LARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIE--QQALSNEHDEASEKRLRSLN-----EELNEKEREFAELE 459          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_SALTY (Chaperone protein clpB OS=Salmonella typhimurium GN=clpB PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 6.012e-39
Identity = 86/166 (51.81%), Postives = 118/166 (71.08%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETE 498
            LARGEL C+GATTLDEYR++IEKD ALERRFQ V V EPSV++TI IL+GL+ERYE+HH ++ TD A+V+AA LS++YI+DR LPDKAIDLIDEA S +R++    PEE   L++ + Q+  E+   ++  D     E   + +D+  +   L DK ++ S+ E E
Sbjct:  303 LARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESD-----EASKKRLDMLNE--ELDDKERQYSELEEE 461          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_SALTI (Chaperone protein clpB OS=Salmonella typhi GN=clpB PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 6.012e-39
Identity = 86/166 (51.81%), Postives = 118/166 (71.08%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETE 498
            LARGEL C+GATTLDEYR++IEKD ALERRFQ V V EPSV++TI IL+GL+ERYE+HH ++ TD A+V+AA LS++YI+DR LPDKAIDLIDEA S +R++    PEE   L++ + Q+  E+   ++  D     E   + +D+  +   L DK ++ S+ E E
Sbjct:  303 LARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESD-----EASKKRLDMLNE--ELDDKERQYSELEEE 461          
BLAST of EY665753 vs. ExPASy Swiss-Prot
Match: CLPB_RICFE (Chaperone protein clpB OS=Rickettsia felis GN=clpB PE=3 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 6.012e-39
Identity = 87/176 (49.43%), Postives = 118/176 (67.05%), Query Frame = 1
Query:    1 LARGELPCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQD----------FEKAGELRDREMDLKAQISALVDKGKEMSKAETE 498
            LARGEL CIGATTLDEYRK+IEKD AL RRFQPV V EP+  +TI IL+G++E+YE+HH +R +D A+V+AA LS +YI+DR+LPDKAIDLIDEA SR+++  +  PEE  EL++ + QI  E     +  D           E+  +L  +  D+KA+  A   K ++  K + E
Sbjct:  304 LARGELHCIGATTLDEYRKYIEKDAALARRFQPVYVSEPTASDTISILRGIKEKYELHHAVRISDSAIVAAATLSNRYITDRYLPDKAIDLIDEACSRMKIELSSKPEELDELDRRIIQIKIELAALKKENDEHSKKKITHLTEELEKLESKSYDMKAKWQAEKSKLQQAQKLKEE 479          
The following BLAST results are available for this feature:
BLAST of EY665753 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
CLPB_ECO574.603e-3951.81Chaperone protein clpB OS=Escherichia coli O157:H7... [more]
CLPB_CLOAB4.603e-3953.42Chaperone protein clpB OS=Clostridium acetobutylic... [more]
CLPB_BORPE4.603e-3952.69Chaperone protein clpB OS=Bordetella pertussis GN=... [more]
CLPB_BORPA4.603e-3952.69Chaperone protein clpB OS=Bordetella parapertussis... [more]
CLPB_BORBR4.603e-3952.69Chaperone protein clpB OS=Bordetella bronchiseptic... [more]
CLPB_VIBVY6.012e-3951.83Chaperone protein clpB OS=Vibrio vulnificus (strai... [more]
CLPB_VIBVU6.012e-3951.83Chaperone protein clpB OS=Vibrio vulnificus GN=clp... [more]
CLPB_SALTY6.012e-3951.81Chaperone protein clpB OS=Salmonella typhimurium G... [more]
CLPB_SALTI6.012e-3951.81Chaperone protein clpB OS=Salmonella typhi GN=clpB... [more]
CLPB_RICFE6.012e-3949.43Chaperone protein clpB OS=Rickettsia felis GN=clpB... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-B11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665753 ID=EY665753; Name=EY665753; organism=Citrus sinensis; type=EST; length=859bp
CTTGCCCGAGGAGAGTTACCGTGTATTGGTGCCACAACACTAGATGAATA
TAGAAAGCACATTGAGAAAGATCCAGCATTAGAAAGACGATTCCAGCCAG
TTAAAGTGCCAGAACCGTCAGTGGATGAAACCATACAAATTTTGAAAGGG
CTTCGAGAGCGATATGAAATTCACCACAAGCTTCGTTACACTGATGAAGC
ACTAGTTTCTGCTGCTCAGTTGTCATACCAGTACATCAGTGACCGTTTTC
TCCCTGATAAAGCTATTGATTTGATTGATGAAGCTGGTTCTCGGGTTCGT
CTTCGTCATGCACAGCTCCCCGAGGAAGCTAGAGAGCTTGAAAAAGAGCT
CAGGCAGATAACTAAGGAGAAGAATGAGGCTGTTCGTGGCCAAGACTTTG
AAAAGGCTGGAGAGTTACGTGATAGAGAAATGGACCTTAAGGCTCAGATA
TCTGCTCTTGTCGATAAAGGCAAAGAGATGAGCAAGGCAGAGACTGAAGC
AGGGGATGTTGGTCCTGTTGTGACTGAAGTGGACATTCAACCCTTTGTCT
CCGCTTGGACGGGGCTTTCCGGGTGAAAAAAGCCTCAACTGATGAATCTG
ATCGCCTTCCTCAAAATGAAGAAAACCCTTTCCCAAAAAAGTTATTGGGT
CGGGATGAAGCTGGCCAAAGTATTAAACCGGGCATTCCGGGGGGACCGGG
TTGGAACTCAAAAACCCCCATTCAACCAATTTGGGAATTTTCTTTTTTTT
CGGGCCCCATGGGGGGGCCGGAAAACTGAACTTGGGCCAAAACCCGGGGG
GCTTATTATTTTTGGTTTTAAAGAGGGGCCCACGAAAACGGTTTGAAAAA
TAAAAGGAT
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