CN186363
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_CORDI (Elongation factor Tu OS=Corynebacterium diphtheriae GN=tuf PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.239e-27 Identity = 81/243 (33.33%), Postives = 127/243 (52.26%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDAL----DNINEPKRPSDKPLRLPLQDV 800 + K H+NI IGHVD GK+TTT + L + E F +A +DK E+ERGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D + + + E+ L + Y+ E+ P + IS + E+ T +++D + D+I +P+R +DKP +P++D+ Sbjct: 8 RTKPHVNIGTIGHVDHGKTTTTAAITKVLADAYPELNEAFAFDA-------------IDKAPEEKERGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKCDMVD---DEEIIELVEMEIRELLAEQDYD-EEAPIIHISALKALEGDEKWTQ-------SIIDLMQACDDSIPDPERETDKPFLMPIEDI 219
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU2_PELTS (Elongation factor Tu 2 OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=tuf2 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.239e-27 Identity = 80/241 (33.20%), Postives = 121/241 (50.21%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGP-TLLDALDN-INEPKRPSDKPLRLPLQDV 800 + K H+NI IGHVD GK+T T + L + K +++++K +D ERERGITI+ A ++ET K + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D D V+E+ S + G +++P + S + +W K L+DA+D I P+R DKP +P++DV Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTAAITMVLATVGKAQVKKYDK---------------IDNAPEERERGITINTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVYLNKADMVDDPELLELVDMEVRELLSTYEFPG---DEIPIITGSALKAMECACGKRECEWCKSIWELMDAVDEYIPTPQRAVDKPFLMPVEDV 223
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_LACS1 (Elongation factor Tu OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=tuf PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.618e-27 Identity = 87/243 (35.80%), Postives = 124/243 (51.03%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDV 800 + K H+NI IGHVD GK+T T I K + E+ EA++ YA + D ERERGITI+ A ++ET K + IDAPGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV+ ++ NK D D + EV L + + + +P + + EGD E L+D +D I P+RP+DKP +P++DV Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLAEKGLAEASD-------YASI-DAAPEERERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVEYIVVFLNKCDLVD---DDELLDLVEMEVRDLLSEYDFPGDDIPVIRGSALKALEGDKDAEAQI-------MELMDTVDEYIPTPQRPTDKPFLMPVEDV 218
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_STRTD (Elongation factor Tu OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=tuf PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.114e-27 Identity = 88/243 (36.21%), Postives = 127/243 (52.26%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDV 800 + K H+NI IGHVD GK+T T + V+ R A K YA + D ERERGITI+ A ++ET K + IDAPGH D++KNMITG +Q D A+L++ ST G QTREH LL+ +GVK +I NK+D + + + E+ L + + + +P + + EGD+ E +D L++ +D I EP+R +DKPL LP++DV Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAIT--------TVLARRLPSAVNTPK---DYASI-DAAPEERERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKVDLVD---DEELLELVEMEIRDLLSEYDFPGDDIPVIQGSALKALEGDSKYE-DIIMD------LMNTVDEYIPEPERDTDKPLLLPVEDV 221
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_STRT2 (Elongation factor Tu OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=tuf PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.114e-27 Identity = 88/243 (36.21%), Postives = 127/243 (52.26%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDV 800 + K H+NI IGHVD GK+T T + V+ R A K YA + D ERERGITI+ A ++ET K + IDAPGH D++KNMITG +Q D A+L++ ST G QTREH LL+ +GVK +I NK+D + + + E+ L + + + +P + + EGD+ E +D L++ +D I EP+R +DKPL LP++DV Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAIT--------TVLARRLPSAVNTPK---DYASI-DAAPEERERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKVDLVD---DEELLELVEMEIRDLLSEYDFPGDDIPVIQGSALKALEGDSKYE-DIIMD------LMNTVDEYIPEPERDTDKPLLLPVEDV 221
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_STRT1 (Elongation factor Tu OS=Streptococcus thermophilus (strain CNRZ 1066) GN=tuf PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.114e-27 Identity = 88/243 (36.21%), Postives = 127/243 (52.26%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDV 800 + K H+NI IGHVD GK+T T + V+ R A K YA + D ERERGITI+ A ++ET K + IDAPGH D++KNMITG +Q D A+L++ ST G QTREH LL+ +GVK +I NK+D + + + E+ L + + + +P + + EGD+ E +D L++ +D I EP+R +DKPL LP++DV Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAIT--------TVLARRLPSAVNTPK---DYASI-DAAPEERERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKVDLVD---DEELLELVEMEIRDLLSEYDFPGDDIPVIQGSALKALEGDSKYE-DIIMD------LMNTVDEYIPEPERDTDKPLLLPVEDV 221
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_DESHY (Elongation factor Tu OS=Desulfitobacterium hafniense (strain Y51) GN=tuf PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.114e-27 Identity = 78/241 (32.37%), Postives = 122/241 (50.62%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWY-KGPTLLDALDN-INEPKRPSDKPLRLPLQDV 800 + K H+N+ IGHVD GK+T+T + L V + F++ +DK ERERGITI + ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + + E+ L + + + +P +P SG + S + +W K L+DA+D+ I P+R +DKP +P++DV Sbjct: 8 RTKPHVNVGTIGHVDHGKTTSTAAITLVLSKAGGAVAQAFDQ---------------IDKAPEERERGITISTSHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVWLNKADMVD---DPELMELVEMEIRELLSEYEFPGDDIPIIPGSGLKALQCGCGSRDCEWCGKIWNLMDAVDSYIPTPERATDKPFLMPVEDV 223
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_DESHD (Elongation factor Tu OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=tuf PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.114e-27 Identity = 78/241 (32.37%), Postives = 122/241 (50.62%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWY-KGPTLLDALDN-INEPKRPSDKPLRLPLQDV 800 + K H+N+ IGHVD GK+T+T + L V + F++ +DK ERERGITI + ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + + E+ L + + + +P +P SG + S + +W K L+DA+D+ I P+R +DKP +P++DV Sbjct: 8 RTKPHVNVGTIGHVDHGKTTSTAAITLVLSKAGGAVAQAFDQ---------------IDKAPEERERGITISTSHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVWLNKADMVD---DPELMELVEMEIRELLSEYEFPGDDIPIIPGSGLKALQCGCGSRDCEWCGKIWNLMDAVDSYIPTPERATDKPFLMPVEDV 223
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_PELLD (Elongation factor Tu OS=Pelodictyon luteolum (strain DSM 273) GN=tuf PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.761e-27 Identity = 87/243 (35.80%), Postives = 125/243 (51.44%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDV 800 ++K H+NI IGHVD GK+T T + L +K AE R+F +DK ERERGITI A +++T K + ID PGH D+IKNMITG +Q D A+L++ T G QTREH LLA + V ++ NK+D P+ + + E+ L + G+ + +P + + EGD E++ L+DA+DN I EP R DKP +P++DV Sbjct: 8 RDKPHVNIGTIGHVDHGKTTLTAAITSVLS----------KKGFAE--SRAFGD---IDKAPEERERGITISTAHVEYQTEKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAGTDGPMP-------QTREHILLARQVNVPALVVFLNKVDIADPEL----LELVEMELRELLTEYGFPGDDIPIIKGSALKALEGDPEGEKAI-------LELMDAVDNYIPEPVRDVDKPFLMPVEDV 217
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_CLAMS (Elongation factor Tu OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=tuf PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.761e-27 Identity = 86/244 (35.25%), Postives = 128/244 (52.46%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISG---FEGD-NMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDV 800 + K H+NI IGHVD GK+T T I K + +++ +A +R F +D ER+RGITI+I+ ++ET K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D + + + EV L ++ + P V +SG EGD +E+ L++A+D +I EP R DKP +P++DV Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AISKVLADKYP--SATNVQRDFAS---IDSAPEERQRGITINISHVEYETPKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPM-------AQTREHVLLAKQVGVPYLLVALNKSDMVD---DEEILELVELEVRELLSSQDFDGDNAPVVQVSGLKALEGDEKWVEQIVK--------LMEAVDESIPEPVRDKDKPFLMPVEDV 221 The following BLAST results are available for this feature:
BLAST of CN186363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186363 ID=CN186363; Name=CN186363; organism=Citrus sinensis; type=EST; length=802bpback to top |