CN186363

Overview
NameCN186363
Unique NameCN186363
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length802
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: CYSN_METPB (Sulfate adenylyltransferase subunit 1 OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=cysN PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.789e-26
Identity = 74/239 (30.96%), Postives = 121/239 (50.63%), Query Frame = 3
Query:   84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQ 794
            + K  +  +  G VD GKST  G L++    I    +   ++++ +   +  +   A ++D L+AERE+GITID+A   F T +    V D PGH  + +NM TG S AD AV+++D+  G          QTR HALL   LG+ ++    NKMD     +S+ ++D I+    ++   + ++  +V  +P+S   GDN++   T   WY G  LL  L+ +           R+P+Q
Sbjct:   20 QSKEVLRFITCGSVDDGKSTLIGRLLHDTKQIFDDQVTALQRDSRKHGTQGAEVDLALLVDGLQAEREQGITIDVAYRFFSTDRRSFIVADTPGHEQYTRNMATGASTADVAVILVDARHG-------LTRQTRRHALLVSLLGIHRVALAINKMDLV--GWSQDKFDAILSGFQAFAAPLNFS--EVRAIPLSAKNGDNVVLPGTAATWYDGVPLLRYLEEVPVKSEERAAAFRMPVQ 247          
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: NODQ_AZOBR (Bifunctional enzyme nodQ OS=Azospirillum brasilense GN=nodQ PE=3 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 2.337e-26
Identity = 74/231 (32.03%), Postives = 120/231 (51.95%), Query Frame = 3
Query:   99 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRS--FKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPS-DKPLR 782
            +  +  G VD GKST  G L++  G I    +E+  +++    +      ++ ++D L+AERE+ ITID+A   F T +    V DAPGH  + +NM T  S A  AVL++D+  G          QTR HA++A  +G++ ++   NKMD    +  +  +  I +  + +   +G+    V  +P+S   GDN++ RS  + W+ GPTLL  L+       P+ D PLR
Sbjct:   10 LRFLTCGSVDDGKSTLIGRLLHDAGLISDDQLEQARRDSRGRAEEDGGIDFSLLVDGLEAEREQSITIDVAYRYFATDRRSFIVADAPGHEQYTRNMATAASGASLAVLLVDARKGLLT-------QTRRHAIVASLMGIRHVVLAVNKMDLV--EDGETVFAAIRQAFTVFSAPLGF--RSVTAIPLSARHGDNVVHRSAAMPWHHGPTLLGHLETAAAEDDPTEDGPLR 229          
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_KOSOT (Elongation factor Tu OS=Kosmotoga olearia (strain TBF 19.5.1) GN=tuf PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.337e-26
Identity = 82/244 (33.61%), Postives = 122/244 (50.00%), Query Frame = 3
Query:   84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDW-YKGPTLLDALDN-INEPKRPSDKPLRLPLQDV 800
            + K H+NI  IGH+D GK+T T  +                K  A      F     +DK   E+ RGITI++   ++ET K +   ID PGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  + V  M+   NK+D       +   + + +EV   L K  +  ++VP +    +   E DN  +      W  K   L+DA+DN + EP+R +DKP  +P++D+
Sbjct:    8 RTKPHLNIGTIGHIDHGKTTLTAAIT---------------KALAYKGFADFTPFDAIDKAPEEKARGITINVTHVEYETEKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAATDGVMP-------QTREHVLLARQVNVPAMVVFINKVDMVD---DEELVELVEEEVRDLLSKYEFPGDEVPVIKGSALMALEADNPDD-----PWVQKIYELMDAVDNYVPEPQRETDKPFLMPIEDI 221          
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_HELMI (Elongation factor Tu OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=tuf PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.337e-26
Identity = 82/241 (34.02%), Postives = 118/241 (48.96%), Query Frame = 3
Query:   84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWY-KGPTLLDALDN-INEPKRPSDKPLRLPLQDV 800
            + K H+NI  IGHVD GK+TTT  +   L               +++ K SFK    +D    ERERGITI+ A  ++ET   +   +D PGH D+IKNMITG +Q D A+L++ +  G          QTREH LLA  +GV  ++   NK D           + +  EV   L    +  + +P V  SG +           +W  K   L+D +D  I  P+R +DKP  +P++DV
Sbjct:    8 RTKPHVNIGTIGHVDHGKTTTTAAITLVL---------------SKVGKASFKKYDEIDAAPEERERGITINTAHVEYETDNRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVWLNKADMVD---DPELMELVEMEVRELLSSYEFPGDDIPIVAGSGLKALECGCGKRECEWCGKIWALMDEVDKYIPTPERATDKPFLMPVEDV 223          
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_UREPA (Elongation factor Tu OS=Ureaplasma parvum GN=tuf PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.052e-26
Identity = 83/243 (34.16%), Postives = 123/243 (50.62%), Query Frame = 3
Query:   84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISG---FEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDV 800
            + K H+NI  IGHVD GK+T T  +   L    + + + +                 +DK   ERERGITI+ +  ++ET   +   +D PGH D++KNMITG +Q D A+L+I ++ G          QT+EH LLA  +GV +++   NK D  T        D +  EV   L K G++ +  P +  SG    EGD + E        K   L+DA+D+ I  P+R +DKP  L ++DV
Sbjct:    8 RTKPHVNIGTIGHVDHGKTTLTAAISTVLAKKGQAIAQSYAD---------------VDKTPEERERGITINASHVEYETKTRHYAHVDCPGHADYVKNMITGAAQMDGAILVIAASDGVM-------AQTKEHILLARQVGVPKIVVFLNKCDFMT---DPDMQDLVEMEVRELLSKYGFDGDNTPVIRGSGLKALEGDPVWEA-------KIDELMDAVDSWIPLPERSTDKPFLLAIEDV 218          
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_UREP2 (Elongation factor Tu OS=Ureaplasma parvum serovar 3 (strain ATCC 27815 / 27 / NCTC 11736) GN=tuf PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.052e-26
Identity = 83/243 (34.16%), Postives = 123/243 (50.62%), Query Frame = 3
Query:   84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISG---FEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDV 800
            + K H+NI  IGHVD GK+T T  +   L    + + + +                 +DK   ERERGITI+ +  ++ET   +   +D PGH D++KNMITG +Q D A+L+I ++ G          QT+EH LLA  +GV +++   NK D  T        D +  EV   L K G++ +  P +  SG    EGD + E        K   L+DA+D+ I  P+R +DKP  L ++DV
Sbjct:    8 RTKPHVNIGTIGHVDHGKTTLTAAISTVLAKKGQAIAQSYAD---------------VDKTPEERERGITINASHVEYETKTRHYAHVDCPGHADYVKNMITGAAQMDGAILVIAASDGVM-------AQTKEHILLARQVGVPKIVVFLNKCDFMT---DPDMQDLVEMEVRELLSKYGFDGDNTPVIRGSGLKALEGDPVWEA-------KIDELMDAVDSWIPLPERSTDKPFLLAIEDV 218          
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_THEFY (Elongation factor Tu OS=Thermobifida fusca (strain YX) GN=tuf PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.052e-26
Identity = 82/244 (33.61%), Postives = 126/244 (51.64%), Query Frame = 3
Query:   84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKG-PTLLDALD-NINEPKRPSDKPLRLPLQDV 800
            + K H+NI  IGH+D GK+T T         I K + +++       +   F     +DK   ERERGITI I+  +++T   +   +D PGH D++KNMITG +Q D A+L++ +T G          QT+EH LLA  +GV  ++   NK D       +  +D +  EV   L +  +  ++VP + +S     EGD         +W K    L++A+D NI EP+R  DKP  +P++DV
Sbjct:    8 RTKPHVNIGTIGHIDHGKTTLTA-------AITKVLHDKYP------DLNPFTPFEDIDKAPEERERGITISISHVEYQTESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTKEHVLLARQVGVPYIVVALNKSDMVD---DEEIFDLVELEVRELLNEYEFPGDEVPVIRVSALKALEGDP--------EWGKKILELMEAVDQNIPEPQRDIDKPFLMPIEDV 220          
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_NOCFA (Elongation factor Tu OS=Nocardia farcinica GN=tuf PE=3 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 3.052e-26
Identity = 87/244 (35.66%), Postives = 131/244 (53.69%), Query Frame = 3
Query:   84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISG---FEGDNMIERSTNLDWYKG-PTLLDALD-NINEPKRPSDKPLRLPLQDV 800
            + K H+NI  IGHVD GK+T T         I K + +++     ++N+ SF +  + DK   E+ RGITI+I+  +++T K +   +DAPGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK D       +   + +  EV   L    ++ E+ P V +SG    EGD          W K    L+DA+D +I +P R +DKP  +P++DV
Sbjct:    8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLADKYP----DLNQ-SFAFDQI-DKAPEEKARGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADMVD---DEEILELVEMEVRELLAAQEFD-EEAPVVRVSGLKALEGDP--------KWVKSVEDLMDAVDESIPDPVRETDKPFLMPIEDV 219          
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_UREU1 (Elongation factor Tu OS=Ureaplasma urealyticum serovar 10 (strain ATCC 33699 / Western) GN=tuf PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.986e-26
Identity = 83/243 (34.16%), Postives = 123/243 (50.62%), Query Frame = 3
Query:   84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISG---FEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDV 800
            + K H+NI  IGHVD GK+T T  +   L    + + + +                 +DK   ERERGITI+ +  ++ET   +   +D PGH D++KNMITG +Q D A+L+I ++ G          QT+EH LLA  +GV +++   NK D  T        D +  EV   L K G++ +  P +  SG    EGD + E        K   L+DA+D+ I  P+R +DKP  L ++DV
Sbjct:    8 RTKPHVNIGTIGHVDHGKTTLTAAISTVLAKKGQAIAQSYAD---------------VDKTPEERERGITINASHVEYETKTRHYAHVDCPGHADYVKNMITGAAQMDGAILVIAASDGVM-------AQTKEHILLARQVGVPKIVVFLNKCDFMT---DPDMQDLVEMEVRELLTKYGFDGDNTPVIRGSGLKALEGDPVWEA-------KIDELMDAVDSWIPLPERSTDKPFLLAIEDV 218          
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_SULMW (Elongation factor Tu OS=Sulcia muelleri (strain GWSS) GN=tuf PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.986e-26
Identity = 80/242 (33.06%), Postives = 121/242 (50.00%), Query Frame = 3
Query:   84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG-PTLLDALDN-INEPKRPSDKPLRLPLQDV 800
            ++K H+NI  IGHVD GK+T T  +   L      V + F                 +D    E+ERGITI+ +  +++T   +   +D PGH D++KNM+TG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK+D    K       E+V+ E+   L K  Y+ E +P +     +G  +   +    W K   TL+  +DN I EP R  DKP  +P++DV
Sbjct:    8 RDKPHLNIGTIGHVDHGKTTLTASITKVLAKKGLAVAKEFSS---------------IDNAPEEKERGITINTSHVEYQTEIRHYAHVDCPGHADYVKNMVTGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVPNLVVFMNKVDQVDDK----EILELVEIEIRELLSKYEYDGENIPII-----QGSALGALNGEKKWEKQIETLMKTVDNYIKEPIRNIDKPFLMPIEDV 218          
The following BLAST results are available for this feature:
BLAST of CN186363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CYSN_METPB1.789e-2630.96Sulfate adenylyltransferase subunit 1 OS=Methyloba... [more]
NODQ_AZOBR2.337e-2632.03Bifunctional enzyme nodQ OS=Azospirillum brasilens... [more]
EFTU_KOSOT2.337e-2633.61Elongation factor Tu OS=Kosmotoga olearia (strain ... [more]
EFTU_HELMI2.337e-2634.02Elongation factor Tu OS=Heliobacterium modesticald... [more]
EFTU_UREPA3.052e-2634.16Elongation factor Tu OS=Ureaplasma parvum GN=tuf P... [more]
EFTU_UREP23.052e-2634.16Elongation factor Tu OS=Ureaplasma parvum serovar ... [more]
EFTU_THEFY3.052e-2633.61Elongation factor Tu OS=Thermobifida fusca (strain... [more]
EFTU_NOCFA3.052e-2635.66Elongation factor Tu OS=Nocardia farcinica GN=tuf ... [more]
EFTU_UREU13.986e-2634.16Elongation factor Tu OS=Ureaplasma urealyticum ser... [more]
EFTU_SULMW3.986e-2633.06Elongation factor Tu OS=Sulcia muelleri (strain GW... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002M13_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002M13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186363 ID=CN186363; Name=CN186363; organism=Citrus sinensis; type=EST; length=802bp
GCGGTTTTCCGAAGGGCGGCGAGAGAGAACCATTTTCGCGAATATCATTT
TAATAAGGTTTTTTCTAGATTTGCCTAATGGGTAAGGAGAAGACTCACAT
CAACATTGTGGTCATCGGCCATGTCGACTCTGGAAAGTCGACCACCACCG
GACACTTGATCTACAAGCTTGGTGGTATTGACAAGCGTGTGATCGAGAGG
TTCGAGAAGGAAGCTGCTGAGATGAACAAGAGGTCATTCAAATACGCCTG
GGTGCTCGACAAGCTCAAGGCTGAGCGTGAACGTGGTATTACCATTGATA
TTGCCTTGTGGAAGTTCGAGACCACCAAGTACTACTGCACCGTCATTGAT
GCTCCCGGACATCGTGACTTTATCAAGAACATGATTACCGGTACCTCACA
GGCTGACTGTGCTGTCCTCATCATTGACTCTACCACTGGTGGTTTTGAAG
CTGGTATCTCCAAGGATGGTCAGACTCGTGAGCATGCTTTGCTTGCTTTC
ACCCTTGGTGTGAAGCAGATGATTTGCTGCTGTAACAAGATGGACGCCAC
CACCCCCAAGTATTCAAAGGCTAGGTACGATGAAATTGTGAAGGAGGTCT
CTTCCTACCTGAAGAAGGTTGGATACAACCCCGAGAAAGTCCCATTCGTG
CCCATCTCTGGTTTCGAGGGTGACAACATGATTGAGAGGTCTACCAACCT
TGACTGGTACAAGGGTCCAACCCTGCTGGACGCTCTTGACAATATCAATG
AGCCGAAGAGGCCCTCAGACAAGCCCCTTCGTCTGCCACTCCAGGACGTG
TA
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