CN186363
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_STRMU (Elongation factor Tu OS=Streptococcus mutans GN=tuf PE=3 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 3.986e-26 Identity = 84/243 (34.57%), Postives = 122/243 (50.21%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDV 800 + K H+NI IGHVD GK+T T + V+ R A K +D ERERGITI+ A ++ET K + IDAPGH D++KNMITG +Q D A+L++ ST G QTREH LL+ +GVK +I NK+D + + + E+ L + + + +P + + EGD E L+ +D+ I +P+R +DKPL LP++DV Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAIT--------TVLARRLPSAVNQPKDYSS----IDAAPEERERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKYLIVFMNKVDLVD---DEELLELVEMEIRDLLSEYDFPGDDIPVIQGSALKALEGDTAQEDII-------MELMHTVDDYIPDPERDTDKPLLLPVEDV 221
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_RHOE4 (Elongation factor Tu OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=tuf PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.986e-26 Identity = 91/249 (36.55%), Postives = 132/249 (53.01%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFE--KEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK----EVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDV 800 + K H+NI IGHVD GK+TTT I K + + F EA+ ++ +DK E+ RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D DEI++ EV L ++ E+ P +PIS EGD +S LD L+ A+D +I +P R +DKP +P++DV Sbjct: 8 RTKPHVNIGTIGHVDHGKTTTTA-------AITKVLADAFPDLNEASAFDQ--------IDKAPEEKARGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADMVDD-------DEILELVEMEVRELLAAQEFD-EEAPVIPISALKALEGDPKWTQSI-LD------LMAAVDESIPDPVRETDKPFLMPVEDV 219
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_PROA2 (Elongation factor Tu OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=tuf PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.986e-26 Identity = 82/243 (33.74%), Postives = 118/243 (48.56%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDV 800 +EK H+NI IGHVD GK+T T + L + F +DK ERERGITI A ++ET K + ID PGH D+IKNMITG +Q D A+L++ T G QTREH LLA + V ++ NK+D P+ + + E+ L + + + +P + + +GD E + L+DA+D+ I EP R DKP +P++DV Sbjct: 8 REKPHVNIGTIGHVDHGKTTLTAAITTVLAKKGMAQLREFGD---------------IDKAPEERERGITISTAHVEYETDKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAGTDGPMP-------QTREHILLARQVNVPALVVFLNKVDIADPEL----IELVELELRELLSEYEFPGDDIPIIKGSALKALDGDPESEAAI-------MELMDAVDSYIPEPVRDVDKPFLMPIEDV 217
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_CALS8 (Elongation factor Tu OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=tuf PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.986e-26 Identity = 82/241 (34.02%), Postives = 116/241 (48.13%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG-PTLLDALDN-INEPKRPSDKPLRLPLQDV 800 + K H+NI IGHVD GK+T T + K A K F +DK ERERGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA + V ++ NK+D + + EV L K GY ++VP V S + + N Y+ L+D +D I P+R DKP +P++DV Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTAAIT---------------KVLALKGKAQFMAYDQIDKAPEERERGITINTAHVEYETDARHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVNVPYIVVFLNKVDMVD---DPELIELVEMEVRELLSKYGYPGDEVPIVKGSALKALESPSQDPNAPEYQCILELMDVVDKYIPTPQRDVDKPFLMPIEDV 223
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_PEDPA (Elongation factor Tu OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=tuf PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.206e-26 Identity = 85/246 (34.55%), Postives = 125/246 (50.81%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDNINE----PKRPSDKPLRLPLQDV 800 + K H+NI IGHVD GK+T T I K + E+ +A++ YA + D E+ERGITI+ A ++ET K + IDAPGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D D + EV L + + + VP + + EGD E+ ++D +D I+E P+R +DKP +P++DV Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLSEKGLAKASD-------YADI-DAAPEEKERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLAHQVGVDYIVVFLNKTDLVD---DDELVDLVEMEVRELLSEYDFPGDDVPVLRGSALKALEGDAEQEK----------VIMDLMDTIDEYIPTPERSTDKPFLMPVEDV 218
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_MYCSS (Elongation factor Tu OS=Mycobacterium sp. (strain MCS) GN=tuf PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.206e-26 Identity = 87/245 (35.51%), Postives = 130/245 (53.06%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKG-PTLLDALD-NINEPKRPSDKPLRLPLQDV 800 + K H+NI IGHVD GK+T T I K + +++ E+N+ R+F +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ E P V +S EGD W K L+DA+D +I +P R +D+P +P++DV Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKYP----ELNESRAFDQ---IDNAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADAVD---DEELIELVEMEVRELLAAQDFD-EDAPVVRVSALKALEGDE--------KWVKSVEELMDAVDESIPDPVRDTDRPFLMPVEDV 219
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_MYCSK (Elongation factor Tu OS=Mycobacterium sp. (strain KMS) GN=tuf PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.206e-26 Identity = 87/245 (35.51%), Postives = 130/245 (53.06%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKG-PTLLDALD-NINEPKRPSDKPLRLPLQDV 800 + K H+NI IGHVD GK+T T I K + +++ E+N+ R+F +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ E P V +S EGD W K L+DA+D +I +P R +D+P +P++DV Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKYP----ELNESRAFDQ---IDNAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADAVD---DEELIELVEMEVRELLAAQDFD-EDAPVVRVSALKALEGDE--------KWVKSVEELMDAVDESIPDPVRDTDRPFLMPVEDV 219
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_MYCSJ (Elongation factor Tu OS=Mycobacterium sp. (strain JLS) GN=tuf PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.206e-26 Identity = 87/245 (35.51%), Postives = 130/245 (53.06%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKG-PTLLDALD-NINEPKRPSDKPLRLPLQDV 800 + K H+NI IGHVD GK+T T I K + +++ E+N+ R+F +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ E P V +S EGD W K L+DA+D +I +P R +D+P +P++DV Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKYP----ELNESRAFDQ---IDNAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADAVD---DEELIELVEMEVRELLAAQDFD-EDAPVVRVSALKALEGDE--------KWVKSVEELMDAVDESIPDPVRDTDRPFLMPVEDV 219
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_MYCPU (Elongation factor Tu OS=Mycoplasma pulmonis GN=tuf PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.206e-26 Identity = 82/243 (33.74%), Postives = 123/243 (50.62%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDV 800 + K H+NI IGHVD GK+T T + L +K AE YA + D E+ RGITI+ A ++ET K + +D PGH D++KNMITG +Q D +L++ +T G QTREH LL+ +GV +M+ NK+D + E+ E+ S L + G++ +K P + + EG+ E++ L+DA+DN I P + DKP L ++DV Sbjct: 8 RSKEHVNIGTIGHVDHGKTTLTAAIATVLS----------KKGLAEAKD----YASI-DAAPEEKARGITINTAHIEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSATDGPMP-------QTREHILLSKQVGVPKMVVFLNKVDMLEGEDEMIELVEL--EIRSLLSEYGFDGDKTPIIKGSALKALEGNPQYEKNIE-------ELMDAVDNYIETPVKELDKPFLLAVEDV 219
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_MYCHP (Elongation factor Tu OS=Mycoplasma hominis (strain ATCC 23114 / IFO 14850 / NCTC 10111 / PG21) GN=tuf PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.206e-26 Identity = 80/243 (32.92%), Postives = 123/243 (50.62%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDV 800 + K H+NI IGHVD GK+T T + L +K AE YA + D E+ RGITI+ + +++T K + +D PGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV +++ NK+D + + +V S L + G++ + P + + +GD E+ L+DA+D I EPKR +DKP + ++DV Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAIATVLA----------KKGLAEARD----YASI-DNAPEEKARGITINTSHIEYQTEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVPKIVVFLNKIDMFKDDEREEMVGLVEMDVRSLLSEYGFDGDNAPIIAGSALKALQGDPEYEKGI-------LELMDAVDTYIEEPKRETDKPFLMAVEDV 221 The following BLAST results are available for this feature:
BLAST of CN186363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186363 ID=CN186363; Name=CN186363; organism=Citrus sinensis; type=EST; length=802bpback to top |