CN186363
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_SPHWW (Elongation factor Tu OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=tuf PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.756e-25 Identity = 83/245 (33.88%), Postives = 123/245 (50.20%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFV---PISGFEGDN-MIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDV 800 + K H NI IGHVD GK++ T + K AE +F +DK ERERGITI A ++ET + + +D PGH D++KNMITG +Q D +L++ +T G QTREH LLA +GV ++ NK+D A E+V+ EV L + + +P + + +G N I R+ L+ L+ A+D+ I +P+RP DKP +P++DV Sbjct: 8 RTKPHCNIGTIGHVDHGKTSLTAAIT---------------KVLAETGGATFVDYANIDKAPEERERGITISTAHVEYETEQRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSATDGPMP-------QTREHILLARQVGVPALVVFMNKVDLV----DDAEILELVELEVRELLSSYEFPGDDIPVIKGSAVKALDGTNDEIGRNAVLE------LMAAVDSYIPQPERPLDKPFLMPIEDV 220
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_RECAM (Elongation factor Tu, mitochondrial OS=Reclinomonas americana GN=TUFA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.756e-25 Identity = 76/243 (31.28%), Postives = 120/243 (49.38%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDV 800 + K H NI IGHVD GK+T T + L V +++ +DK E++RGITI + ++ETTK + ID PGH D++KNMITG +Q D A+L++ + G QTREH LL+ +GV ++ NK+D D + EV L Y +++P + + +G+ ++S L++A+DN I +P+R D+P +P++DV Sbjct: 8 RTKPHCNIGTIGHVDHGKTTLTAAITKVLSETGGAVFTDYDQ---------------IDKAPEEKKRGITISTSHVEYETTKRHYAHIDCPGHEDYVKNMITGAAQMDGAILVVSAVDGPMP-------QTREHILLSRQVGVPSLVVFLNKVDMVN---DPEMLDLVEMEVRELLLSYKYPGDEIPIIRGSALKALQGEIEYKKSI-------LKLMEAVDNYIPQPERSFDRPFLMPVEDV 218
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_PELPD (Elongation factor Tu OS=Pelobacter propionicus (strain DSM 2379) GN=tuf1 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.756e-25 Identity = 77/240 (32.08%), Postives = 118/240 (49.17%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDV 800 + K H+NI IGHVD GK+T T + L G + + F++ +D ERERGITI A ++ET K + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + + + E+ L + + +P V S + + + L L+DA+D+ I +P+R DKP +P++DV Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTAAITKVLAGKGQAEFKAFDQ---------------IDNAPEERERGITIATAHVEYETDKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVYLNKADMVD---DEELLELVELEIRELLSSYDFPGDDIPIVKGSALKA--LEGEKSELGEDSIIKLMDAVDSYIPDPERAVDKPFLMPVEDV 220
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_MYCPN (Elongation factor Tu OS=Mycoplasma pneumoniae GN=tuf PE=3 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 5.756e-25 Identity = 77/242 (31.82%), Postives = 120/242 (49.59%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQD 797 + K H+N+ IGH+D GK+T T + L K R+++ +DK E+ RGITI+ A ++ + K + +D PGH D+IKNMITG +Q D A+L++ +T S QTREH LLA +GV +M+ NK D T + + + + +EV L G++ + P + + EGD E + L++A+D I P+R DKP L ++D Sbjct: 8 RSKPHVNVGTIGHIDHGKTTLTAAICTVLAKEGKSAATRYDQ---------------IDKAPEEKARGITINSAHVEYSSDKRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSATD-------SVMPQTREHILLARQVGVPRMVVFLNKCDIATDEEVQ---ELVAEEVRDLLTSYGFDGKNTPIIYGSALKALEGDPKWEAKIH-------DLMNAVDEWIPTPEREVDKPFLLAIED 217
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_MACCJ (Elongation factor Tu OS=Macrococcus caseolyticus (strain JCSC5402) GN=tuf PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.756e-25 Identity = 81/244 (33.20%), Postives = 120/244 (49.18%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGH----LIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDV 800 + KTH NI IGHVD GK+T T L KLGG RS+ +D E+ERGITI+ + ++ET K + +D PGH D++KNMITG +Q D +L++ + G QTREH LL+ +GV ++ NK+D + + + EV L + + + VP + S + +E + K L+DA+D I P+R SDKP +P++DV Sbjct: 8 RSKTHANIGTIGHVDHGKTTLTAAIATVLSKKLGG----------------EARSYDQ---IDNAPEEKERGITINTSHIEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAADGPMP-------QTREHILLSRNVGVPALVVFLNKVDMVD---DEELLELVEMEVRDLLSEYDFPGDDVPVIAGSALKALEGVEEYED----KIMELMDAVDEYIPTPERDSDKPFMMPVEDV 218
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_DESDG (Elongation factor Tu OS=Desulfovibrio desulfuricans (strain G20) GN=tuf PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.756e-25 Identity = 86/249 (34.54%), Postives = 125/249 (50.20%), Query Frame = 3 Query: 78 MGKEK-----THINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGP--TLLDALDN-INEPKRPSDKPLRLPLQDV 800 MGKEK H+NI IGH+D GK+T T I K+ + +M ++ Y + DK E+ERGITI A ++ETT + +D PGH D+IKNMITG +Q D A++++ +T G QTREH LLA +GV ++ NK D + + + EV L + + P + S + +E + D P LLDA D+ I EP+R +DKP +P++DV Sbjct: 1 MGKEKFERTKPHVNIGTIGHIDHGKTTLTA-AITKIASL-------------KMGSKAVAYDEI-DKAPEEKERGITIATAHVEYETTLRHYAHVDCPGHADYIKNMITGAAQMDGAIIVVAATDGPMP-------QTREHILLARQVGVPSIVVFLNKCDMVD---DEELLELVELEVRELLSSYDFPGDDTPVIRGSALKA---LECDSADDDAAKPILELLDACDSYIPEPERDTDKPFLMPIEDV 221
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_DESDA (Elongation factor Tu OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=tuf PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.756e-25 Identity = 88/252 (34.92%), Postives = 120/252 (47.62%), Query Frame = 3 Query: 78 MGKEK-----THINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGD--NMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDV 800 MGKEK H+NI IGH+D GK+T T + K A + F +DK E+ERGITI + ++ET K + +D PGH D+IKNMITG +Q D +L++ +T G QTREH LLA +GV Q++ NK D + + + EV L + + VP + + E D N E LD LLDA D+ I EP R DKP +P++DV Sbjct: 1 MGKEKFERKKPHVNIGTIGHIDHGKTTLTAAIT---------------KVANLKSGGKFISYDEIDKAPEEKERGITIATSHVEYETDKRHYAHVDCPGHADYIKNMITGAAQMDGGILVVAATDGPMP-------QTREHILLARQVGVPQLVVFLNKCDLVD---DEELLELVELEVRELLSSYDFPGDDVPVIRGSALKALESDDPNSAEAKCILD------LLDACDSFIPEPVRDIDKPFLMPIEDV 221
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_ACICJ (Elongation factor Tu OS=Acidiphilium cryptum (strain JF-5) GN=tuf PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.756e-25 Identity = 79/240 (32.92%), Postives = 117/240 (48.75%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDV 800 + K H NI IGHVD GK++ T + K AE +F+ +D ER RGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NKMD P + + EV L K + + +P I G + + + L L++A+D+ I +P+RP DKP +P++DV Sbjct: 8 RTKPHCNIGTIGHVDHGKTSLTAAIT---------------KVLAESGGATFRAYDSIDAAPEERARGITIATAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPALVVFLNKMDMADPDL----VELVEMEVRDLLSKYEFPGDDIPI--IKGSALCALEDSNAELGREAILKLMEAVDSYIPQPERPKDKPFLMPVEDV 219
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_RICTY (Elongation factor Tu OS=Rickettsia typhi GN=tuf PE=3 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 7.518e-25 Identity = 78/246 (31.71%), Postives = 120/246 (48.78%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHL---IYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDV 800 + K H+NI IGHVD GK++ T + + K GG ++ +D E+ERGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV M+ NK+D + + EV L K G+ ++P + + EG E++ N L++A+D+ I +P R +DKP +P++DV Sbjct: 8 RTKPHVNIGTIGHVDHGKTSLTAAITIILAKTGGAKATAYDQ------------------IDAAPEEKERGITISTAHVEYETNNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPAMVVFLNKVDMVD---DPDLLELVEMEVRELLSKYGFPGNEIPIIKGSALQALEGKPEGEKAIN-------ELMNAVDSYIPQPIRATDKPFLMPIEDV 218
BLAST of CN186363 vs. ExPASy Swiss-Prot
Match: EFTU_LAWIP (Elongation factor Tu OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=tuf PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 7.518e-25 Identity = 80/240 (33.33%), Postives = 118/240 (49.17%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDV 800 + K H+N+ IGH+D GK+T T + K A+ F +DK E+ERGITI A ++ET K + +D PGH D+IKNMITG +Q D A++++ +T G QTREH LLA +GV ++ NK D + + E+ L GY + VP + S + N + + + D LLDA D+ I +P+R DKP +P++DV Sbjct: 8 RNKPHVNVGTIGHIDHGKTTLTAAIT---------------KVASMKMGGKFVGYDEIDKAPEEKERGITIATAHVEYETPKRHYAHVDCPGHADYIKNMITGAAQMDGAIIVVAATDGPMP-------QTREHILLARQVGVPYLVVFMNKCDMVD---DPELLELVELEIRELLSTYGYPGDDVPVIRGSALKALNS-DSADSDDAKPILELLDACDSYIPDPQRDIDKPFLMPIEDV 221 The following BLAST results are available for this feature:
BLAST of CN186363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186363 ID=CN186363; Name=CN186363; organism=Citrus sinensis; type=EST; length=802bpback to top |