EL492562
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EL492562 vs. ExPASy Swiss-Prot
Match: RS16_BOVIN (40S ribosomal protein S16 OS=Bos taurus GN=RPS16 PE=2 SV=3) HSP 1 Score: 70.8626 bits (172), Expect = 2.373e-12 Identity = 33/39 (84.62%), Postives = 37/39 (94.87%), Query Frame = 1 Query: 13 IRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEI 129 +RVKGGGH +QIYAIRQSI+KALVA+YQKYVDE SKKEI Sbjct: 70 VRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEI 108
BLAST of EL492562 vs. ExPASy Swiss-Prot
Match: RS16_ICTPU (40S ribosomal protein S16 OS=Ictalurus punctatus GN=rps16 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.100e-12 Identity = 32/39 (82.05%), Postives = 37/39 (94.87%), Query Frame = 1 Query: 13 IRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEI 129 +RVKGGGH +Q+YAIRQSI+KALVA+YQKYVDE SKKEI Sbjct: 70 VRVKGGGHVAQVYAIRQSISKALVAYYQKYVDEASKKEI 108
BLAST of EL492562 vs. ExPASy Swiss-Prot
Match: RS16_ORYSJ (40S ribosomal protein S16 OS=Oryza sativa subsp. japonica GN=RPS16A PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.906e-12 Identity = 33/39 (84.62%), Postives = 37/39 (94.87%), Query Frame = 1 Query: 13 IRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEI 129 IRV+GGG TSQIYAIRQ+IAKALVA+YQKYVDE SKKE+ Sbjct: 73 IRVRGGGKTSQIYAIRQAIAKALVAYYQKYVDEASKKEV 111
BLAST of EL492562 vs. ExPASy Swiss-Prot
Match: RS16_ORYSI (40S ribosomal protein S16 OS=Oryza sativa subsp. indica GN=RPS16A PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.906e-12 Identity = 33/39 (84.62%), Postives = 37/39 (94.87%), Query Frame = 1 Query: 13 IRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEI 129 IRV+GGG TSQIYAIRQ+IAKALVA+YQKYVDE SKKE+ Sbjct: 73 IRVRGGGKTSQIYAIRQAIAKALVAYYQKYVDEASKKEV 111
BLAST of EL492562 vs. ExPASy Swiss-Prot
Match: RS16_HETFO (40S ribosomal protein S16 OS=Heteropneustes fossilis GN=rps16 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.906e-12 Identity = 31/39 (79.49%), Postives = 37/39 (94.87%), Query Frame = 1 Query: 13 IRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEI 129 +RVKGGGH +Q+YAIRQ+I+KALVA+YQKYVDE SKKEI Sbjct: 70 VRVKGGGHVAQVYAIRQAISKALVAYYQKYVDEASKKEI 108
BLAST of EL492562 vs. ExPASy Swiss-Prot
Match: RS162_ARATH (40S ribosomal protein S16-2 OS=Arabidopsis thaliana GN=RPS16B PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.906e-12 Identity = 33/39 (84.62%), Postives = 37/39 (94.87%), Query Frame = 1 Query: 13 IRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEI 129 IR GGG+TS++YAIRQSIAKALVA+YQKYVDEQSKKEI Sbjct: 70 IRATGGGNTSRVYAIRQSIAKALVAYYQKYVDEQSKKEI 108
BLAST of EL492562 vs. ExPASy Swiss-Prot
Match: RS16_DROME (40S ribosomal protein S16 OS=Drosophila melanogaster GN=RpS16 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 9.019e-12 Identity = 32/39 (82.05%), Postives = 36/39 (92.31%), Query Frame = 1 Query: 13 IRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEI 129 +RV GGGH +QIYAIRQ+I+KALVAFYQKYVDE SKKEI Sbjct: 72 VRVSGGGHVAQIYAIRQAISKALVAFYQKYVDEASKKEI 110
BLAST of EL492562 vs. ExPASy Swiss-Prot
Match: RS16_SPOFR (40S ribosomal protein S16 OS=Spodoptera frugiperda GN=RpS16 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.009e-11 Identity = 30/39 (76.92%), Postives = 36/39 (92.31%), Query Frame = 1 Query: 13 IRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEI 129 + VKGGGH +Q+YAIRQ+I+KAL+AFYQKYVDE SKKEI Sbjct: 75 VTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEI 113
BLAST of EL492562 vs. ExPASy Swiss-Prot
Match: RS16_CAEEL (40S ribosomal protein S16 OS=Caenorhabditis elegans GN=rps-16 PE=1 SV=3) HSP 1 Score: 66.6254 bits (161), Expect = 4.476e-11 Identity = 29/39 (74.36%), Postives = 36/39 (92.31%), Query Frame = 1 Query: 13 IRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEI 129 IRV GGGH +QIYA+RQ++AKALVA+Y KYVDEQSK+E+ Sbjct: 68 IRVSGGGHVAQIYAVRQALAKALVAYYHKYVDEQSKREL 106
BLAST of EL492562 vs. ExPASy Swiss-Prot
Match: RS16_AEDAE (40S ribosomal protein S16 OS=Aedes aegypti GN=RpS16 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.846e-11 Identity = 30/39 (76.92%), Postives = 36/39 (92.31%), Query Frame = 1 Query: 13 IRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEI 129 IRV GGGH +QIYAIRQ+I+KALV+FYQKYVDE S+KE+ Sbjct: 72 IRVSGGGHVAQIYAIRQAISKALVSFYQKYVDEASRKEL 110 The following BLAST results are available for this feature:
BLAST of EL492562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >EL492562 ID=EL492562; Name=EL492562; organism=Citrus sinensis; type=EST; length=255bpback to top |