EY665748

Overview
NameEY665748
Unique NameEY665748
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length521
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665748 vs. ExPASy Swiss-Prot
Match: CH10_EXISA (10 kDa chaperonin OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=groS PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.052e-18
Identity = 44/93 (47.31%), Postives = 63/93 (67.74%), Query Frame = 1
Query:   88 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 366
            LKPL DRV I+V E EE T GG++L + +KEKP  G V+AVG G + +EG R  L +   + V+YSKYAG + K  DG  Y+ +R S+++A++
Sbjct:    2 LKPLGDRVIIEVVEKEEKTIGGIVLPDTAKEKPQQGKVVAVGTGRVTDEGKRIDLDVKENDLVIYSKYAGTEVK-HDGKEYLIVRESDILAIV 93          
BLAST of EY665748 vs. ExPASy Swiss-Prot
Match: CH10_DESVV (10 kDa chaperonin OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=groS PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 8.618e-18
Identity = 40/94 (42.55%), Postives = 65/94 (69.15%), Query Frame = 1
Query:   85 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 366
            +LKPLNDRV +K  E+EE TAGGL + + +KEKPS G V+A GPG   ++G    +++  G+ V+++KYAG + K  DG  ++ +R  +++A++
Sbjct:    2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAAGPGKTADDGKLVAMTVKAGDMVLFNKYAGTEIK-IDGVEHLVMREDDILAII 94          
BLAST of EY665748 vs. ExPASy Swiss-Prot
Match: CH10_DESVH (10 kDa chaperonin OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=groS PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 8.618e-18
Identity = 40/94 (42.55%), Postives = 65/94 (69.15%), Query Frame = 1
Query:   85 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 366
            +LKPLNDRV +K  E+EE TAGGL + + +KEKPS G V+A GPG   ++G    +++  G+ V+++KYAG + K  DG  ++ +R  +++A++
Sbjct:    2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAAGPGKTADDGKLVAMTVKAGDMVLFNKYAGTEIK-IDGVEHLVMREDDILAII 94          
BLAST of EY665748 vs. ExPASy Swiss-Prot
Match: CH10_BACLD (10 kDa chaperonin OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=groS PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 8.618e-18
Identity = 43/93 (46.24%), Postives = 66/93 (70.97%), Query Frame = 1
Query:   88 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 366
            LKPL DRV I++ E+EE TA G++L +++KEKP  G V+A G G + E G R  L +  G+ +++SKYAG + K  +GT+Y+ LR S+++AV+
Sbjct:    2 LKPLGDRVVIELVESEEKTASGIVLPDSAKEKPQEGKVVAAGSGRVLESGERVALEVKTGDRIIFSKYAGTEVK-YEGTDYLILRESDILAVI 93          
BLAST of EY665748 vs. ExPASy Swiss-Prot
Match: CH10_CORJK (10 kDa chaperonin OS=Corynebacterium jeikeium (strain K411) GN=groS PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.126e-17
Identity = 41/94 (43.62%), Postives = 66/94 (70.21%), Query Frame = 1
Query:   85 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 366
            ++KPL DRV +++ EAE TTA GL++ +++KEKP   TVIAVGPG   ++ +R P+ +  G+TV++SKY G + K  +G  Y+ L   +++AV+
Sbjct:    5 NIKPLEDRVLVQIVEAETTTASGLVIPDSAKEKPQEATVIAVGPGRWADDDDRIPMDVKEGDTVVFSKYGGTELK-YNGEEYLLLTQRDILAVI 97          
BLAST of EY665748 vs. ExPASy Swiss-Prot
Match: CH10_CORDI (10 kDa chaperonin OS=Corynebacterium diphtheriae GN=groS PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.126e-17
Identity = 42/94 (44.68%), Postives = 67/94 (71.28%), Query Frame = 1
Query:   85 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 366
            ++KPL DRV ++++EAE TTA GL++ +++KEKP  G V+A GPG  D + +R P+ I  G+TV++SKY G + K  +G  Y+ L A +V+A++
Sbjct:    5 NIKPLEDRVLVQISEAETTTASGLVIPDSAKEKPQEGVVVAAGPGRFDGD-DRVPMDIKEGDTVVFSKYGGTELK-YNGEEYLLLNARDVLAII 96          
BLAST of EY665748 vs. ExPASy Swiss-Prot
Match: CH10_MYCLE (10 kDa chaperonin OS=Mycobacterium leprae GN=groS PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 1.470e-17
Identity = 44/95 (46.32%), Postives = 65/95 (68.42%), Query Frame = 1
Query:   88 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEG-NRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 369
            +KPL D++ ++  EAE  T  GL++ E +KEKP  GTV+AVGPG  DE+G  R P+ ++ G+ V+YSKY G + K  +G  Y+ L A +V+AV+S
Sbjct:    6 IKPLEDKILVQAGEAETMTPSGLVIPENAKEKPQEGTVVAVGPGRWDEDGAKRIPVDVSEGDIVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99          
BLAST of EY665748 vs. ExPASy Swiss-Prot
Match: CH10_MYCLB (10 kDa chaperonin OS=Mycobacterium leprae (strain Br4923) GN=groS PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.470e-17
Identity = 44/95 (46.32%), Postives = 65/95 (68.42%), Query Frame = 1
Query:   88 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEG-NRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 369
            +KPL D++ ++  EAE  T  GL++ E +KEKP  GTV+AVGPG  DE+G  R P+ ++ G+ V+YSKY G + K  +G  Y+ L A +V+AV+S
Sbjct:    6 IKPLEDKILVQAGEAETMTPSGLVIPENAKEKPQEGTVVAVGPGRWDEDGAKRIPVDVSEGDIVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99          
BLAST of EY665748 vs. ExPASy Swiss-Prot
Match: CH10_BACSU (10 kDa chaperonin OS=Bacillus subtilis GN=groS PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 1.470e-17
Identity = 42/93 (45.16%), Postives = 65/93 (69.89%), Query Frame = 1
Query:   88 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 366
            LKPL DRV I++ E+EE TA G++L +++KEKP  G ++A G G + E G R  L +  G+ +++SKYAG + K  +GT Y+ LR S+++AV+
Sbjct:    2 LKPLGDRVVIELVESEEKTASGIVLPDSAKEKPQEGKIVAAGSGRVLESGERVALEVKEGDRIIFSKYAGTEVK-YEGTEYLILRESDILAVI 93          
BLAST of EY665748 vs. ExPASy Swiss-Prot
Match: CH10_BACA2 (10 kDa chaperonin OS=Bacillus amyloliquefaciens (strain FZB42) GN=groS PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.470e-17
Identity = 42/93 (45.16%), Postives = 65/93 (69.89%), Query Frame = 1
Query:   88 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 366
            LKPL DRV I++ E+EE TA G++L +++KEKP  G ++A G G + E G R  L +  G+ +++SKYAG + K  +GT Y+ LR S+++AV+
Sbjct:    2 LKPLGDRVVIELVESEEKTASGIVLPDSAKEKPQEGKIVAAGSGRVLESGERVALEVKEGDRIIFSKYAGTEVK-YEGTEYLILRESDILAVI 93          
The following BLAST results are available for this feature:
BLAST of EY665748 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH10_EXISA5.052e-1847.3110 kDa chaperonin OS=Exiguobacterium sp. (strain A... [more]
CH10_DESVV8.618e-1842.5510 kDa chaperonin OS=Desulfovibrio vulgaris subsp.... [more]
CH10_DESVH8.618e-1842.5510 kDa chaperonin OS=Desulfovibrio vulgaris (strai... [more]
CH10_BACLD8.618e-1846.2410 kDa chaperonin OS=Bacillus licheniformis (strai... [more]
CH10_CORJK1.126e-1743.6210 kDa chaperonin OS=Corynebacterium jeikeium (str... [more]
CH10_CORDI1.126e-1744.6810 kDa chaperonin OS=Corynebacterium diphtheriae G... [more]
CH10_MYCLE1.470e-1746.3210 kDa chaperonin OS=Mycobacterium leprae GN=groS ... [more]
CH10_MYCLB1.470e-1746.3210 kDa chaperonin OS=Mycobacterium leprae (strain ... [more]
CH10_BACSU1.470e-1745.1610 kDa chaperonin OS=Bacillus subtilis GN=groS PE=... [more]
CH10_BACA21.470e-1745.1610 kDa chaperonin OS=Bacillus amyloliquefaciens (s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-B06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665748 ID=EY665748; Name=EY665748; organism=Citrus sinensis; type=EST; length=521bp
GACTGAGTTGGAGTTCCCTTTTCAAATCATCTCATAGTGAGGGAGGATGA
CGTAGTTGCCTTTCTTGAAACAGATGAAATCAAGGATCTTAAGCCCCTTA
ATGACAGAGTTTTCATCAAGGTTGCTGAGGCTGAGGAGACAACTGCTGGA
GGTTTGTTGTTGACGGAGGCAAGCAAGGAGAAACCTTCCATTGGAACGGT
CATTGCTGTTGGACCCGGTCCTCTAGATGAGGAAGGTAATAGGAAACCTC
TATCCATTGCACCAGGGAACACGGTGATGTATTCGAAGTATGCAGGGAAT
GACTTCAAGGGCAGTGATGGTACCAACTACATTGCTTTAAGAGCTTCTGA
AGTGATGGCTGTGCTCTCTTAGTTGTCTGTGTTTACTTGAGCGAGGCTTT
ATATGTATTAGTGAATTGAATTTTATGGTTGAGTTGCCTCAAGGCATACG
GATTTTGACTGTAATCTTATTTGAAAATAAAGAATTGCAGCTTGATCAAA
AAAAAAAAAAAAAAAAAAAAG
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