EY665748

Overview
NameEY665748
Unique NameEY665748
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length521
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665748 vs. ExPASy Swiss-Prot
Match: CH10_NOCSJ (10 kDa chaperonin OS=Nocardioides sp. (strain BAA-499 / JS614) GN=groS PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.165e-20
Identity = 45/95 (47.37%), Postives = 68/95 (71.58%), Query Frame = 1
Query:   85 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 369
            ++KPL DR+ +K  +AE+TTA GL++ + +KEKP  G V+A+GPG +D+ GNR PL +  G+ V+YSKY G + K + G  Y+ L A +V+AV+S
Sbjct:    4 NIKPLEDRIVVKPLDAEQTTASGLVIPDTAKEKPQEGEVLAIGPGRIDDNGNRVPLDVTVGDKVIYSKYGGTEVKYA-GEEYLILSARDVLAVVS 97          
BLAST of EY665748 vs. ExPASy Swiss-Prot
Match: CH10_MYCTU (10 kDa chaperonin OS=Mycobacterium tuberculosis GN=groS PE=1 SV=3)

HSP 1 Score: 97.8265 bits (242), Expect = 3.165e-20
Identity = 47/96 (48.96%), Postives = 70/96 (72.92%), Query Frame = 1
Query:   85 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 369
            ++KPL D++ ++  EAE TTA GL++ + +KEKP  GTV+AVGPG  DE+G ++ PL +A G+TV+YSKY G + K  +G  Y+ L A +V+AV+S
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99          
BLAST of EY665748 vs. ExPASy Swiss-Prot
Match: CH10_MYCTA (10 kDa chaperonin OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=groS PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.165e-20
Identity = 47/96 (48.96%), Postives = 70/96 (72.92%), Query Frame = 1
Query:   85 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 369
            ++KPL D++ ++  EAE TTA GL++ + +KEKP  GTV+AVGPG  DE+G ++ PL +A G+TV+YSKY G + K  +G  Y+ L A +V+AV+S
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99          
BLAST of EY665748 vs. ExPASy Swiss-Prot
Match: CH10_MYCS2 (10 kDa chaperonin OS=Mycobacterium smegmatis GN=groS PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.165e-20
Identity = 47/96 (48.96%), Postives = 70/96 (72.92%), Query Frame = 1
Query:   85 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 369
            ++KPL D++ ++  EAE TTA GL++ + +KEKP  GTV+AVGPG  DE+G ++ PL +A G+TV+YSKY G + K  +G  Y+ L A +V+AV+S
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99          
BLAST of EY665748 vs. ExPASy Swiss-Prot
Match: CH10_MYCBT (10 kDa chaperonin OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=groS PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.165e-20
Identity = 47/96 (48.96%), Postives = 70/96 (72.92%), Query Frame = 1
Query:   85 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 369
            ++KPL D++ ++  EAE TTA GL++ + +KEKP  GTV+AVGPG  DE+G ++ PL +A G+TV+YSKY G + K  +G  Y+ L A +V+AV+S
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99          
BLAST of EY665748 vs. ExPASy Swiss-Prot
Match: CH10_MYCBP (10 kDa chaperonin OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=groS PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.165e-20
Identity = 47/96 (48.96%), Postives = 70/96 (72.92%), Query Frame = 1
Query:   85 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 369
            ++KPL D++ ++  EAE TTA GL++ + +KEKP  GTV+AVGPG  DE+G ++ PL +A G+TV+YSKY G + K  +G  Y+ L A +V+AV+S
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99          
BLAST of EY665748 vs. ExPASy Swiss-Prot
Match: CH10_MYCBO (10 kDa chaperonin OS=Mycobacterium bovis GN=groS PE=1 SV=4)

HSP 1 Score: 97.8265 bits (242), Expect = 3.165e-20
Identity = 47/96 (48.96%), Postives = 70/96 (72.92%), Query Frame = 1
Query:   85 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 369
            ++KPL D++ ++  EAE TTA GL++ + +KEKP  GTV+AVGPG  DE+G ++ PL +A G+TV+YSKY G + K  +G  Y+ L A +V+AV+S
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99          
BLAST of EY665748 vs. ExPASy Swiss-Prot
Match: CH10_NOSP7 (10 kDa chaperonin OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=groS PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.398e-20
Identity = 47/97 (48.45%), Postives = 70/97 (72.16%), Query Frame = 1
Query:   79 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRASEVMAVL 366
            +  +KPL+DRVF+KV  +EE TAGGL L + +KEKP +G V+A+GPG  +E+G+R+ L I  G+ V+YSKYAG D K G++   Y+ L   +++AV+
Sbjct:    8 VSTVKPLSDRVFVKVNASEEKTAGGLYLPDTAKEKPQVGEVVALGPGKRNEDGSRQELEIKVGDKVLYSKYAGTDIKLGTE--EYVLLSEKDILAVV 102          
BLAST of EY665748 vs. ExPASy Swiss-Prot
Match: CH10_MYCUA (10 kDa chaperonin OS=Mycobacterium ulcerans (strain Agy99) GN=groS PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.398e-20
Identity = 47/96 (48.96%), Postives = 69/96 (71.88%), Query Frame = 1
Query:   85 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 369
            ++KPL D++ ++  EAE TTA GL++ + +KEKP  GTV+AVGPG  DE+G ++ PL +A G+TV+YSKY G + K   G  Y+ L A +V+AV+S
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIK-YGGEEYLILSARDVLAVVS 99          
BLAST of EY665748 vs. ExPASy Swiss-Prot
Match: CH10_MYCMM (10 kDa chaperonin OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=groS PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.398e-20
Identity = 47/96 (48.96%), Postives = 69/96 (71.88%), Query Frame = 1
Query:   85 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 369
            ++KPL D++ ++  EAE TTA GL++ + +KEKP  GTV+AVGPG  DE+G ++ PL +A G+TV+YSKY G + K   G  Y+ L A +V+AV+S
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIK-YGGEEYLILSARDVLAVVS 99          
The following BLAST results are available for this feature:
BLAST of EY665748 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH10_NOCSJ3.165e-2047.3710 kDa chaperonin OS=Nocardioides sp. (strain BAA-... [more]
CH10_MYCTU3.165e-2048.9610 kDa chaperonin OS=Mycobacterium tuberculosis GN... [more]
CH10_MYCTA3.165e-2048.9610 kDa chaperonin OS=Mycobacterium tuberculosis (s... [more]
CH10_MYCS23.165e-2048.9610 kDa chaperonin OS=Mycobacterium smegmatis GN=gr... [more]
CH10_MYCBT3.165e-2048.9610 kDa chaperonin OS=Mycobacterium bovis (strain B... [more]
CH10_MYCBP3.165e-2048.9610 kDa chaperonin OS=Mycobacterium bovis (strain B... [more]
CH10_MYCBO3.165e-2048.9610 kDa chaperonin OS=Mycobacterium bovis GN=groS P... [more]
CH10_NOSP75.398e-2048.4510 kDa chaperonin OS=Nostoc punctiforme (strain AT... [more]
CH10_MYCUA5.398e-2048.9610 kDa chaperonin OS=Mycobacterium ulcerans (strai... [more]
CH10_MYCMM5.398e-2048.9610 kDa chaperonin OS=Mycobacterium marinum (strain... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-B06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665748 ID=EY665748; Name=EY665748; organism=Citrus sinensis; type=EST; length=521bp
GACTGAGTTGGAGTTCCCTTTTCAAATCATCTCATAGTGAGGGAGGATGA
CGTAGTTGCCTTTCTTGAAACAGATGAAATCAAGGATCTTAAGCCCCTTA
ATGACAGAGTTTTCATCAAGGTTGCTGAGGCTGAGGAGACAACTGCTGGA
GGTTTGTTGTTGACGGAGGCAAGCAAGGAGAAACCTTCCATTGGAACGGT
CATTGCTGTTGGACCCGGTCCTCTAGATGAGGAAGGTAATAGGAAACCTC
TATCCATTGCACCAGGGAACACGGTGATGTATTCGAAGTATGCAGGGAAT
GACTTCAAGGGCAGTGATGGTACCAACTACATTGCTTTAAGAGCTTCTGA
AGTGATGGCTGTGCTCTCTTAGTTGTCTGTGTTTACTTGAGCGAGGCTTT
ATATGTATTAGTGAATTGAATTTTATGGTTGAGTTGCCTCAAGGCATACG
GATTTTGACTGTAATCTTATTTGAAAATAAAGAATTGCAGCTTGATCAAA
AAAAAAAAAAAAAAAAAAAAG
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