EY665746

Overview
NameEY665746
Unique NameEY665746
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length872
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665746 vs. ExPASy Swiss-Prot
Match: HAOX2_RAT (Hydroxyacid oxidase 2 OS=Rattus norvegicus GN=Hao2 PE=1 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 7.057e-27
Identity = 65/166 (39.16%), Postives = 101/166 (60.84%), Query Frame = 3
Query:  159 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPEAGSQRS*HQKQI 653
            +++A A+++L K  +D+    A+D  T  EN  AF RI  RPR L D+SK+D  TT+ G +IS PI I+PTA   +A P+GE               +SS+++ S+E++ +  P G R+FQLY+  D +   Q+V+RAE  GFKA+ +T+DTP  G++R   + Q+
Sbjct:    8 DFKAHAQKQLSKTSWDFIEGEADDGITYSENIAAFKRIRLRPRYLRDMSKVDTRTTIQGQEISAPICISPTAFHSIAWPDGEKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQL 173          
BLAST of EY665746 vs. ExPASy Swiss-Prot
Match: HAOX2_MOUSE (Hydroxyacid oxidase 2 OS=Mus musculus GN=Hao2 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.627e-25
Identity = 62/159 (38.99%), Postives = 96/159 (60.38%), Query Frame = 3
Query:  159 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPEAGSQR 632
            +++A A+++L K  +D+    A+D  T  +N  AF RI  RPR L DVSKID  TT+ G +I+ PI I+PTA   +A  +GE               +SS+++ +VE++ +  P G+ +FQLYV  D ++  Q+V+R E  GFKA+ +TVD P  G++R
Sbjct:    8 DFKAQAQKQLSKTSWDFIEGEADDGITYNDNLAAFRRIRLRPRYLRDVSKIDTRTTIQGQEINAPICISPTAFHSIAWADGEKSTAKAAQKANICYVISSYASYTVEDIVAAAPGGLHWFQLYVQPDWDINKQMVQRIEALGFKALVVTVDAPVLGNRR 166          
BLAST of EY665746 vs. ExPASy Swiss-Prot
Match: LLDD2_MYCTU (Putative L-lactate dehydrogenase [cytochrome] 2 OS=Mycobacterium tuberculosis GN=lldD2 PE=3 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 6.182e-23
Identity = 63/182 (34.62%), Postives = 96/182 (52.75%), Query Frame = 3
Query:   96 P*INLSRKQ---STVKMGEITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPEAGSQ 629
            P +  +R Q   S  ++G    + +   IAK + P+  FDY   GAED+ ++   R  F  I F P IL DV+ +     VLG    +P  IAPT   ++ H EGE          G   +LS+ +T ++E++    P G ++FQLY+++DR+    LVRR   AGF  + +TVD P AG++
Sbjct:   15 PLLQFNRPQFDTSKRRLGAALTIQDLRRIAKRRTPRAAFDYADGGAEDELSIARARQGFRDIEFHPTILRDVTTVCAGWNVLGQPTVLPFGIAPTGFTRLMHTEGEIAGARAAAAAGIPFSLSTLATCAIEDLVIAVPQGRKWFQLYMWRDRDRSMALVRRVAAAGFDTMLVTVDVPVAGAR 196          
BLAST of EY665746 vs. ExPASy Swiss-Prot
Match: LLDD_PSEFS (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas fluorescens (strain SBW25) GN=lldD PE=3 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 2.349e-22
Identity = 68/211 (32.23%), Postives = 103/211 (48.82%), Query Frame = 3
Query:  144 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPEAGSQ-RS*HQKQIPSTPLF*L*RFFRVWTLAKWTRQMTLGLLPIVLGQLIRSL 773
            I++  +Y A A+ KLP+ +FDY   GA  + T++ N +  + I  R RIL +V  + + TTV G ++ MP++++P  +  M    GE          G    LS+ S   +EEVAS      +FQLYV KDR  +   + RA+ AG   +  TVD P  G++ R  H     S P     R  +  T  +W   + L   P  LG + + L
Sbjct:    3 ISSASDYRAAAQRKLPRFLFDYIDGGAYAEHTMRANSSDLAEISLRQRILRNVDNLSLKTTVFGQELDMPVILSPVGLTGMYARRGEVQAAKAAANKGVPFCLSTVSVCPIEEVASQSARAIWFQLYVLKDRGFMRNALERAQAAGVTTLVFTVDMPTPGARYRDAHSGM--SGPFAAQRRMLQAMTKPQWAFDVGLMGRPHDLGNISKYL 211          
BLAST of EY665746 vs. ExPASy Swiss-Prot
Match: MDLB_PSEPU ((S)-mandelate dehydrogenase OS=Pseudomonas putida GN=mdlB PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.166e-21
Identity = 55/158 (34.81%), Postives = 88/158 (55.70%), Query Frame = 3
Query:  150 NVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPEAG 623
            NV +Y  + +++LPKMV+DY   GAED++ ++ NR+ F +  F+P+ L+DVS+  +   VLG + SMP++I PT +     P+G+          G    LS+ S  S+E++A    G  +FQLYV   R +   +V +A   G+  + LT D    G
Sbjct:    7 NVEDYRKLRQKRLPKMVYDYLEGGAEDEYGVKHNRDVFQQWRFKPKRLVDVSRRSLQAEVLGKRQSMPLLIGPTGLNGALWPKGDLALARAATKAGIPFVLSTASNMSIEDLARQCDGDLWFQLYVI-HREIAQGMVLKALHTGYTTLVLTTDVAVNG 163          
BLAST of EY665746 vs. ExPASy Swiss-Prot
Match: LLDD_PSEU2 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas syringae pv. syringae (strain B728a) GN=lldD PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.392e-21
Identity = 69/211 (32.70%), Postives = 101/211 (47.87%), Query Frame = 3
Query:  144 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPEAGSQ-RS*HQKQIPSTPLF*L*RFFRVWTLAKWTRQMTLGLLPIVLGQLIRSL 773
            I++  +Y A AK KLP+ +FDY   GA  + TL+ N +  + I  R R+L +V  + + T + G  ++MPI+++P  +  M    GE               LS+ S  S+EEVAS      +FQLYV KDR  +   + RA+ AG   +  TVD P  G++ R  H     S P     R  +  T   W   + L   P  LG + R L
Sbjct:    3 ISSASDYRAAAKRKLPRFLFDYIDGGAYAEHTLRANGSDLADISLRQRVLKNVDNVSLETRLFGESLAMPIILSPVGLSGMYARRGEVQVARAAANKRIPFCLSTVSVCSIEEVASQSDQAIWFQLYVLKDRGFMKNALERAKAAGVTTLVFTVDMPTPGARYRDAHSGM--SGPYAAPRRILQAMTKPDWALNVGLLGRPHDLGNISRYL 211          
BLAST of EY665746 vs. ExPASy Swiss-Prot
Match: LLDD_CITK8 (L-lactate dehydrogenase [cytochrome] OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=lldD PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.870e-21
Identity = 67/207 (32.37%), Postives = 101/207 (48.79%), Query Frame = 3
Query:  144 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPEAGSQ-RS*HQKQIPSTPLF*L*RFFRVWTLAKWTRQMTLGLLPIVLGQL 761
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R R+L ++S + + TT+   K+SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +DR  +   + RA+ AG   +  TVD P  G++ R  H     S P   L R+++  T  +W   + L   P  LG +
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYIDGGAYAEYTLRRNVEDLSEVALRQRVLKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGM--SGPNAALRRYWQAATHPQWAWDVGLNGRPHDLGNI 207          
BLAST of EY665746 vs. ExPASy Swiss-Prot
Match: LLDD_ESCF3 (L-lactate dehydrogenase [cytochrome] OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=lldD PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.289e-20
Identity = 66/207 (31.88%), Postives = 102/207 (49.28%), Query Frame = 3
Query:  144 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPEAGSQ-RS*HQKQIPSTPLF*L*RFFRVWTLAKWTRQMTLGLLPIVLGQL 761
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT+   K+SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +DR  +   + RA+ AG   +  TVD P  G++ R  H     S P   + R+++  T  +W   + L   P  LG +
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAGAADAHGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGM--SGPNAAMRRYWQAVTHPQWAWDVGLNGRPHDLGNI 207          
BLAST of EY665746 vs. ExPASy Swiss-Prot
Match: LLDD_VIBPA (L-lactate dehydrogenase [cytochrome] OS=Vibrio parahaemolyticus GN=lldD PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.684e-20
Identity = 54/157 (34.39%), Postives = 82/157 (52.23%), Query Frame = 3
Query:  159 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPEAGSQ 629
            +Y A AK KLP  +F Y   G+ D+ TL+ N +    +  R R+L D++ + + T + G K++MPI +AP  +  M    GE          G   T+S+ S   +EEVA       +FQLYV KDR  +  ++ RA+ AG   +  TVD P  G++
Sbjct:    8 DYRAAAKAKLPPFLFHYIDGGSYDERTLKRNTDDLGDVALRQRVLRDMTDLSLETEIFGEKLAMPIALAPVGLTGMYARRGEVQAAKAAEKKGIPFTMSTVSVCPIEEVAPAIERPMWFQLYVLKDRGFMKNVLERAKAAGVTTLVFTVDMPVPGAR 164          
BLAST of EY665746 vs. ExPASy Swiss-Prot
Match: LLDD_PSEMY (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas mendocina (strain ymp) GN=lldD PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.199e-20
Identity = 58/157 (36.94%), Postives = 83/157 (52.87%), Query Frame = 3
Query:  159 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPEAGSQ 629
            +Y A A+ KLP  +F Y   GA  + TL+ N    S I  R R+L ++S++D+ST + G K+SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV KDR  +   + RA+ AG   +  TVD P  G++
Sbjct:    8 DYRAAAERKLPPFLFHYADGGAYAEHTLRRNVADLSNIELRQRVLKNMSELDLSTELFGEKMSMPVGLAPVGLTGMYARRGEVQAAKAAAAKGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKAAGCSTLVFTVDMPVPGAR 164          
The following BLAST results are available for this feature:
BLAST of EY665746 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
HAOX2_RAT7.057e-2739.16Hydroxyacid oxidase 2 OS=Rattus norvegicus GN=Hao2... [more]
HAOX2_MOUSE8.627e-2538.99Hydroxyacid oxidase 2 OS=Mus musculus GN=Hao2 PE=2... [more]
LLDD2_MYCTU6.182e-2334.62Putative L-lactate dehydrogenase [cytochrome] 2 OS... [more]
LLDD_PSEFS2.349e-2232.23L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
MDLB_PSEPU1.166e-2134.81(S)-mandelate dehydrogenase OS=Pseudomonas putida ... [more]
LLDD_PSEU23.392e-2132.70L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_CITK89.870e-2132.37L-lactate dehydrogenase [cytochrome] OS=Citrobacte... [more]
LLDD_ESCF31.289e-2031.88L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_VIBPA1.684e-2034.39L-lactate dehydrogenase [cytochrome] OS=Vibrio par... [more]
LLDD_PSEMY2.199e-2036.94L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-B04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665746 ID=EY665746; Name=EY665746; organism=Citrus sinensis; type=EST; length=872bp
ATTTCTTAATCTCCCTCTATAACTCAGTCTTTGTTCATCATCGTCTTCTC
TCCACTGGTTTCTCTGAATGCACTTTGCTGCACAGTCTTTGTAAACCTTA
GATTAATTTAAGTAGAAAACAGTCAACTGTCAAGATGGGGGAGATCACAA
ATGTGATGGAGTATGAGGCCATTGCCAAGGAAAAGTTGCCAAAGATGGTG
TTTGATTACTATGCTTCAGGTGCAGAGGACCAGTGGACTTTGCAAGAGAA
CAGGAATGCTTTCTCAAGAATCCTGTTTCGACCTCGCATTCTGATTGATG
TAAGCAAAATAGACATGAGTACCACTGTCTTGGGCTTCAAGATATCGATG
CCAATCATGATTGCCCCAACAGCCATGCAGAAGATGGCTCATCCTGAAGG
GGAGTATGCTACAGCTAGAGCTGCATCGGCTGCTGGAACGATTATGACAT
TGTCTTCGTGGTCTACTTCTAGCGTTGAAGAGGTTGCTTCAACAGGACCT
GGCATCCGCTTTTTCCAGCTCTATGTGTACAAGGACAGGAATGTGGTTGC
TCAGCTTGTGAGAAGGGCTGAAAGAGCCGGATTCAAGGCCATTGCTCTAA
CAGTTGATACCCCCGAGGCTGGGTCGCAGAGAAGCTGACATCAAAAACAG
ATTCCCTCTACCCCCCTTTTTTGACTTTAAAGATTTTTCAGGGTTTGGAC
CTTGGCAAAATGGACGAGGCAAATGACTCTGGGCTTGCTGCCTATTGTGC
TTGGCCAATTGATTCGTTCTCTTAACTTGAAAGGACGTGAAGTGGGTTTC
CAAAAATCCCCCAAATTTGCCATTTTGGGGGAAAGGGGGGAATTCCACCA
AAAAAGGGATGCGCGGGATTTC
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