EY665746

Overview
NameEY665746
Unique NameEY665746
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length872
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665746 vs. ExPASy Swiss-Prot
Match: LLDD_ACTPJ (L-lactate dehydrogenase [cytochrome] OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=lldD PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.275e-17
Identity = 50/162 (30.86%), Postives = 82/162 (50.62%), Query Frame = 3
Query:  144 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPEAGSQ 629
            I++  +Y   A+ ++P  +F Y   G+  + TL+ N    + +  R R+L D+S++D    + G K++MP ++AP     M    GE          G   TLS+ S   +EEV +      +FQLYV KDR  +  ++ RA+ AG   +  TVD P  G++
Sbjct:    3 ISSTNDYREAARRRVPPFMFHYADGGSFSERTLERNVTDLADLALRQRVLKDMSQLDTEIELFGEKLAMPAVLAPVGACGMYARRGEVQAAQAAENKGIPFTLSTVSICPIEEVTAAIKRPMWFQLYVLKDRGFMKHVLERAKAAGCSTLVFTVDMPTPGAR 164          
BLAST of EY665746 vs. ExPASy Swiss-Prot
Match: LLDD_ACTP7 (L-lactate dehydrogenase [cytochrome] OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=lldD PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.275e-17
Identity = 50/162 (30.86%), Postives = 82/162 (50.62%), Query Frame = 3
Query:  144 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPEAGSQ 629
            I++  +Y   A+ ++P  +F Y   G+  + TL+ N    + +  R R+L D+S++D    + G K++MP ++AP     M    GE          G   TLS+ S   +EEV +      +FQLYV KDR  +  ++ RA+ AG   +  TVD P  G++
Sbjct:    3 ISSANDYREAARRRVPPFMFHYADGGSFSERTLERNVTDLADLALRQRVLKDMSQLDTEIELFGEKLAMPAVLAPVGACGMYARRGEVQAAQAAENKGIPFTLSTVSICPIEEVTAAIKRPMWFQLYVLKDRGFMKHVLERAKAAGCSTLVFTVDMPTPGAR 164          
BLAST of EY665746 vs. ExPASy Swiss-Prot
Match: LLDD_ACTP2 (L-lactate dehydrogenase [cytochrome] OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=lldD PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.275e-17
Identity = 50/162 (30.86%), Postives = 82/162 (50.62%), Query Frame = 3
Query:  144 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPEAGSQ 629
            I++  +Y   A+ ++P  +F Y   G+  + TL+ N    + +  R R+L D+S++D    + G K++MP ++AP     M    GE          G   TLS+ S   +EEV +      +FQLYV KDR  +  ++ RA+ AG   +  TVD P  G++
Sbjct:    3 ISSANDYREAARRRVPPFMFHYADGGSFSERTLERNVTDLADLALRQRVLKDMSQLDTEIELFGEKLAMPAVLAPVGACGMYARRGEVQAAQAAENKGIPFTLSTVSICPIEEVTAAIKRPMWFQLYVLKDRGFMKHVLERAKAAGCSTLVFTVDMPTPGAR 164          
BLAST of EY665746 vs. ExPASy Swiss-Prot
Match: LLDD_BARHE (L-lactate dehydrogenase [cytochrome] OS=Bartonella henselae GN=lldD PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.972e-17
Identity = 50/162 (30.86%), Postives = 80/162 (49.38%), Query Frame = 3
Query:  144 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPEAGSQ 629
            I++ ++Y   AK +LP  +F Y   GA  + T++ N      +  R RIL  V ++D+ST +    + +PI++AP  +  M    GE          G   TLSS S   + EV        +FQLYV KDR  +  ++ R+  +G + +  TVD P  G++
Sbjct:    3 ISSTLDYRKAAKRRLPPFLFHYIDGGAYAEETMRRNYADLQALALRQRILRGVGEVDLSTKLFDQTLDLPIILAPVGLTGMYARRGEVQAARAAVAKGIPFTLSSVSVCPIAEVQKAVGSAFWFQLYVLKDRGFMRDVLERSWASGVRTLVFTVDMPVPGAR 164          
BLAST of EY665746 vs. ExPASy Swiss-Prot
Match: LLDD_HAEDU (L-lactate dehydrogenase [cytochrome] OS=Haemophilus ducreyi GN=lldD PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.129e-16
Identity = 49/162 (30.25%), Postives = 81/162 (50.00%), Query Frame = 3
Query:  144 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPEAGSQ 629
            I +  +Y   A+ ++P  +F Y   G+  + TL  N +  + +  R R+L D+S+++    + G K++MPI++AP     M    GE          G   TLS+ S   +EEV        ++QLYV KDR  +  ++ RA+ AG   +  TVD P  G++
Sbjct:    3 IASANDYREAARRRVPPFMFHYADGGSFSERTLARNVSDLADLALRQRVLKDMSQLNTEIELFGEKLAMPIVLAPVGALGMYARRGEVQAAQAAENKGLPFTLSTVSVCPIEEVTPAIKRPMWYQLYVLKDRGFMKSVLERAKAAGCSTLVFTVDMPTPGAR 164          
BLAST of EY665746 vs. ExPASy Swiss-Prot
Match: YKN3_SCHPO (Uncharacterized lactate 2-monooxygenase PB1A11.03 OS=Schizosaccharomyces pombe GN=SPAPB1A11.03 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.893e-13
Identity = 47/153 (30.72%), Postives = 80/153 (52.29%), Query Frame = 3
Query:  162 YEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEV-ASTGPGIRFFQLYVYKD--RNVVAQLVRRAERAGFKAIALTVDT 611
            +E +A E++ K    Y    A  + T  +N  +F +    P  LI     D+STTV G K   PI +AP  +QK+ +PEGE               +S+ S +S E++  ++GPG R++QLY   +  +++   L+ RA++ G + + +T+DT
Sbjct:   39 WEQLAVERMTKDAAGYVYGCAGKRETYDKNMESFKKWSIIPNRLIKSGFPDLSTTVFGQKYPFPIALAPVGVQKIFNPEGESGSCAAATREHIPYIISTASATSFEDIEKASGPGERWYQLYWPSNDHQDITISLLNRAKKTGCRVLIVTLDT 191          
BLAST of EY665746 vs. ExPASy Swiss-Prot
Match: LA2M_MYCSM (Lactate 2-monooxygenase OS=Mycobacterium smegmatis PE=1 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 2.204e-12
Identity = 45/154 (29.22%), Postives = 78/154 (50.65%), Query Frame = 3
Query:  159 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPE--GEYXXXXXXXXXGTIMTLSSWSTSSVEEVAS-TGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDT 611
            ++EA A++ LP  V  Y A G+ D+ T + N  AF      PR+L+  ++ D+S  + G   + P+  AP  +  +   +  G+          G     S+ + SS+E++    G    +FQLY  +DR++    +RRAE AG+  + +T+DT
Sbjct:   29 DWEAHAQQALPPGVLSYVAGGSGDEHTQRANVEAFKHWGLMPRMLMAATERDLSVELWGKTWAAPMFFAPIGVIALCAQDGHGDAASAQASARTGVPYITSTLAVSSLEDIRKHAGDTPAYFQLYYPEDRDLAESFIRRAEEAGYDGLVITLDT 182          
The following BLAST results are available for this feature:
BLAST of EY665746 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
LLDD_ACTPJ2.275e-1730.86L-lactate dehydrogenase [cytochrome] OS=Actinobaci... [more]
LLDD_ACTP72.275e-1730.86L-lactate dehydrogenase [cytochrome] OS=Actinobaci... [more]
LLDD_ACTP22.275e-1730.86L-lactate dehydrogenase [cytochrome] OS=Actinobaci... [more]
LLDD_BARHE2.972e-1730.86L-lactate dehydrogenase [cytochrome] OS=Bartonella... [more]
LLDD_HAEDU1.129e-1630.25L-lactate dehydrogenase [cytochrome] OS=Haemophilu... [more]
YKN3_SCHPO9.893e-1330.72Uncharacterized lactate 2-monooxygenase PB1A11.03 ... [more]
LA2M_MYCSM2.204e-1229.22Lactate 2-monooxygenase OS=Mycobacterium smegmatis... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-B04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665746 ID=EY665746; Name=EY665746; organism=Citrus sinensis; type=EST; length=872bp
ATTTCTTAATCTCCCTCTATAACTCAGTCTTTGTTCATCATCGTCTTCTC
TCCACTGGTTTCTCTGAATGCACTTTGCTGCACAGTCTTTGTAAACCTTA
GATTAATTTAAGTAGAAAACAGTCAACTGTCAAGATGGGGGAGATCACAA
ATGTGATGGAGTATGAGGCCATTGCCAAGGAAAAGTTGCCAAAGATGGTG
TTTGATTACTATGCTTCAGGTGCAGAGGACCAGTGGACTTTGCAAGAGAA
CAGGAATGCTTTCTCAAGAATCCTGTTTCGACCTCGCATTCTGATTGATG
TAAGCAAAATAGACATGAGTACCACTGTCTTGGGCTTCAAGATATCGATG
CCAATCATGATTGCCCCAACAGCCATGCAGAAGATGGCTCATCCTGAAGG
GGAGTATGCTACAGCTAGAGCTGCATCGGCTGCTGGAACGATTATGACAT
TGTCTTCGTGGTCTACTTCTAGCGTTGAAGAGGTTGCTTCAACAGGACCT
GGCATCCGCTTTTTCCAGCTCTATGTGTACAAGGACAGGAATGTGGTTGC
TCAGCTTGTGAGAAGGGCTGAAAGAGCCGGATTCAAGGCCATTGCTCTAA
CAGTTGATACCCCCGAGGCTGGGTCGCAGAGAAGCTGACATCAAAAACAG
ATTCCCTCTACCCCCCTTTTTTGACTTTAAAGATTTTTCAGGGTTTGGAC
CTTGGCAAAATGGACGAGGCAAATGACTCTGGGCTTGCTGCCTATTGTGC
TTGGCCAATTGATTCGTTCTCTTAACTTGAAAGGACGTGAAGTGGGTTTC
CAAAAATCCCCCAAATTTGCCATTTTGGGGGAAAGGGGGGAATTCCACCA
AAAAAGGGATGCGCGGGATTTC
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