EY665746

Overview
NameEY665746
Unique NameEY665746
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length872
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665746 vs. ExPASy Swiss-Prot
Match: LLDD_ECO24 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.751e-20
Identity = 66/207 (31.88%), Postives = 99/207 (47.83%), Query Frame = 3
Query:  144 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPEAGSQ-RS*HQKQIPSTPLF*L*RFFRVWTLAKWTRQMTLGLLPIVLGQL 761
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT+   K+SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV +DR  +   + RA+ AG   +  TVD P  G++ R  H     S P   + R+ +  T  +W   + L   P  LG +
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGM--SGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNI 207          
BLAST of EY665746 vs. ExPASy Swiss-Prot
Match: LLDD_AZOC5 (L-lactate dehydrogenase [cytochrome] OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=lldD PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.751e-20
Identity = 55/162 (33.95%), Postives = 84/162 (51.85%), Query Frame = 3
Query:  144 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPEAGSQ 629
            I++  +Y A AK +LP  +F Y   GA  ++TL+ N    S I  R ++L +V+ + + T + G K++MP+ +AP  +  M    GE          G   TLS+ S   +EEV S      +FQLYV KDR  +   + RA+ AG   +  TVD P  G++
Sbjct:    3 ISSPNDYRAAAKSRLPPFLFHYVDGGAYAEYTLRRNVEDLSHIALRQQVLRNVADLSLETELFGQKLTMPVALAPVGLTGMLARRGEVQAAKAAQAKGVPFTLSTVSVCPIEEVQSQCAKPIWFQLYVLKDRGFMRNALERAQAAGINTLIFTVDMPVPGAR 164          
BLAST of EY665746 vs. ExPASy Swiss-Prot
Match: LLDD_ALCFA (L-lactate dehydrogenase [cytochrome] OS=Alcaligenes faecalis GN=lldD PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.751e-20
Identity = 69/221 (31.22%), Postives = 107/221 (48.42%), Query Frame = 3
Query:  144 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPEAGSQ-RS*HQKQIPSTPLF*L*RFFRVWTLAKWTRQMTLGLLPIVLGQLIRSLNLKGREVGFQ 803
            I++  +Y   A+++LP  +F Y   GA  + TL+ N +  + +  R R+L D+S++D S  + G K+SMP+ ++P  +  M    GE          G   T+SS S   +EEVA       +FQLYV KDR  +   + RA+ AG   +  TVD P  G++ R  H     S P   L R+ +     +W   + L   P  LG + R L   G+  G +
Sbjct:    3 ISSSTDYRRAAQKRLPPFLFHYIDGGAYAEHTLRRNVDDLAEVALRQRVLKDMSQLDTSIDLFGEKLSMPVALSPVGLTGMYARRGEVQAARAADARGIPFTMSSVSVCPIEEVAPRLSRPMWFQLYVLKDRGFMRNALERAQAAGCSTLVFTVDMPVPGARYRDAHSGM--SGPNAALRRYAQAVMHPRWAWDVGLLGRPHDLGNISRYL---GKPTGLE 218          
BLAST of EY665746 vs. ExPASy Swiss-Prot
Match: LLDD_ERWCT (L-lactate dehydrogenase [cytochrome] OS=Erwinia carotovora subsp. atroseptica GN=lldD PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.899e-20
Identity = 55/157 (35.03%), Postives = 82/157 (52.23%), Query Frame = 3
Query:  159 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPEAGSQ 629
            +Y A A+ +LP  +F Y   GA  + TL+ N    + I  R RIL ++S + + T + G K++MP+++AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV KDR  +   + RA+ AG K +  TVD P  G++
Sbjct:    8 DYRAAAQRRLPPFLFHYIDGGAYGEHTLRRNTADLADIALRQRILKNMSDLSLETQLFGEKLAMPVVLAPVGLTGMYARRGEVQAARAAAQKGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRSALERAQAAGVKTLVFTVDMPTPGAR 164          
BLAST of EY665746 vs. ExPASy Swiss-Prot
Match: LLDD_XANP2 (L-lactate dehydrogenase [cytochrome] OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=lldD PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.398e-20
Identity = 57/162 (35.19%), Postives = 85/162 (52.47%), Query Frame = 3
Query:  144 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPEAGSQ 629
            I++  +Y   A+ +LP  +F Y   GA  + TL+ N    S +  R R+L  V ++D+STT+L  ++SMP+ +AP  +  M    GE          G   TLS+ S  S+EEV S      +FQLYV KDR  +   + RA  AG + +  TVD P  G++
Sbjct:    3 ISSSSDYREAARRRLPPFLFHYIDGGAYAEATLRRNVEDLSDLALRQRVLKSVGEVDLSTTLLKQQLSMPVGLAPVGLTGMYARRGEVQAAQAATQKGIPFTLSTVSVCSIEEVQSQVGKPIWFQLYVLKDRGFMKNALERAWAAGIRTLVFTVDMPVPGAR 164          
BLAST of EY665746 vs. ExPASy Swiss-Prot
Match: LLDD_SERP5 (L-lactate dehydrogenase [cytochrome] OS=Serratia proteamaculans (strain 568) GN=lldD PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.398e-20
Identity = 55/157 (35.03%), Postives = 82/157 (52.23%), Query Frame = 3
Query:  159 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPEAGSQ 629
            +Y A A+ KLP  +F Y   GA  + TL+ N    + I  R RIL ++S + + T++ G K++MP+++ P  +  M    GE          G   TLS+ S   +EEVA       +FQLYV KDR  +   + RA+ AG K +  TVD P  G++
Sbjct:    8 DYRAAAQAKLPPFLFHYIDGGAYAEHTLRRNTEDLAGIALRQRILRNMSDLSLETSLFGEKLAMPVILGPVGLTGMYARRGEVQAAKAAAQKGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKAAGVKTLVFTVDMPVPGAR 164          
BLAST of EY665746 vs. ExPASy Swiss-Prot
Match: LLDD_SALTY (L-lactate dehydrogenase [cytochrome] OS=Salmonella typhimurium GN=lldD PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.398e-20
Identity = 65/207 (31.40%), Postives = 100/207 (48.31%), Query Frame = 3
Query:  144 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPEAGSQ-RS*HQKQIPSTPLF*L*RFFRVWTLAKWTRQMTLGLLPIVLGQL 761
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT+    +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +DR  +   + RA+ AG   +  TVD P  G++ R  H     S P   + R+++     KW   + L   P  LG +
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGM--SGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNI 207          
BLAST of EY665746 vs. ExPASy Swiss-Prot
Match: LLDD_SALTI (L-lactate dehydrogenase [cytochrome] OS=Salmonella typhi GN=lldD PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.398e-20
Identity = 65/207 (31.40%), Postives = 100/207 (48.31%), Query Frame = 3
Query:  144 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPEAGSQ-RS*HQKQIPSTPLF*L*RFFRVWTLAKWTRQMTLGLLPIVLGQL 761
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT+    +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +DR  +   + RA+ AG   +  TVD P  G++ R  H     S P   + R+++     KW   + L   P  LG +
Sbjct:    3 ISATSDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTLKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGM--SGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNI 207          
BLAST of EY665746 vs. ExPASy Swiss-Prot
Match: LLDD_SALSV (L-lactate dehydrogenase [cytochrome] OS=Salmonella schwarzengrund (strain CVM19633) GN=lldD PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.398e-20
Identity = 65/207 (31.40%), Postives = 100/207 (48.31%), Query Frame = 3
Query:  144 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPEAGSQ-RS*HQKQIPSTPLF*L*RFFRVWTLAKWTRQMTLGLLPIVLGQL 761
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT+    +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +DR  +   + RA+ AG   +  TVD P  G++ R  H     S P   + R+++     KW   + L   P  LG +
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTLKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGM--SGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNI 207          
BLAST of EY665746 vs. ExPASy Swiss-Prot
Match: LLDD_SALPK (L-lactate dehydrogenase [cytochrome] OS=Salmonella paratyphi A (strain AKU_12601) GN=lldD PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.398e-20
Identity = 65/207 (31.40%), Postives = 100/207 (48.31%), Query Frame = 3
Query:  144 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPEAGSQ-RS*HQKQIPSTPLF*L*RFFRVWTLAKWTRQMTLGLLPIVLGQL 761
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT+    +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +DR  +   + RA+ AG   +  TVD P  G++ R  H     S P   + R+++     KW   + L   P  LG +
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIQRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGM--SGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNI 207          
The following BLAST results are available for this feature:
BLAST of EY665746 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
LLDD_ECO243.751e-2031.88L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_AZOC53.751e-2033.95L-lactate dehydrogenase [cytochrome] OS=Azorhizobi... [more]
LLDD_ALCFA3.751e-2031.22L-lactate dehydrogenase [cytochrome] OS=Alcaligene... [more]
LLDD_ERWCT4.899e-2035.03L-lactate dehydrogenase [cytochrome] OS=Erwinia ca... [more]
LLDD_XANP26.398e-2035.19L-lactate dehydrogenase [cytochrome] OS=Xanthobact... [more]
LLDD_SERP56.398e-2035.03L-lactate dehydrogenase [cytochrome] OS=Serratia p... [more]
LLDD_SALTY6.398e-2031.40L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALTI6.398e-2031.40L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALSV6.398e-2031.40L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALPK6.398e-2031.40L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-B04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665746 ID=EY665746; Name=EY665746; organism=Citrus sinensis; type=EST; length=872bp
ATTTCTTAATCTCCCTCTATAACTCAGTCTTTGTTCATCATCGTCTTCTC
TCCACTGGTTTCTCTGAATGCACTTTGCTGCACAGTCTTTGTAAACCTTA
GATTAATTTAAGTAGAAAACAGTCAACTGTCAAGATGGGGGAGATCACAA
ATGTGATGGAGTATGAGGCCATTGCCAAGGAAAAGTTGCCAAAGATGGTG
TTTGATTACTATGCTTCAGGTGCAGAGGACCAGTGGACTTTGCAAGAGAA
CAGGAATGCTTTCTCAAGAATCCTGTTTCGACCTCGCATTCTGATTGATG
TAAGCAAAATAGACATGAGTACCACTGTCTTGGGCTTCAAGATATCGATG
CCAATCATGATTGCCCCAACAGCCATGCAGAAGATGGCTCATCCTGAAGG
GGAGTATGCTACAGCTAGAGCTGCATCGGCTGCTGGAACGATTATGACAT
TGTCTTCGTGGTCTACTTCTAGCGTTGAAGAGGTTGCTTCAACAGGACCT
GGCATCCGCTTTTTCCAGCTCTATGTGTACAAGGACAGGAATGTGGTTGC
TCAGCTTGTGAGAAGGGCTGAAAGAGCCGGATTCAAGGCCATTGCTCTAA
CAGTTGATACCCCCGAGGCTGGGTCGCAGAGAAGCTGACATCAAAAACAG
ATTCCCTCTACCCCCCTTTTTTGACTTTAAAGATTTTTCAGGGTTTGGAC
CTTGGCAAAATGGACGAGGCAAATGACTCTGGGCTTGCTGCCTATTGTGC
TTGGCCAATTGATTCGTTCTCTTAACTTGAAAGGACGTGAAGTGGGTTTC
CAAAAATCCCCCAAATTTGCCATTTTGGGGGAAAGGGGGGAATTCCACCA
AAAAAGGGATGCGCGGGATTTC
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