EY665744

Overview
NameEY665744
Unique NameEY665744
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_BACHD (Pyridoxal biosynthesis lyase pdxS OS=Bacillus halodurans GN=pdxS PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.590e-33
Identity = 71/148 (47.97%), Postives = 92/148 (62.16%), Query Frame = 2
Query:   14 NFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            +F +PFVCG R+LGEA RRI EGA+MIRTKGE GTGNI+EAVRH+R +   IR + NM  DE+ T AK I APY+L++  K+ G LPVV+F            +MMQLG D             P K A+ IV   THY D +++ ++
Sbjct:  120 DFTVPFVCGARDLGEAARRIGEGASMIRTKGEPGTGNIVEAVRHMRMMQAQIRKVSNMSTDELMTEAKNIGAPYELLLSIKETGELPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSETPEKFARAIVEATTHYEDYDLIAKL 267          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_OCEIH (Pyridoxal biosynthesis lyase pdxS OS=Oceanobacillus iheyensis GN=pdxS PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 8.607e-33
Identity = 69/148 (46.62%), Postives = 94/148 (63.51%), Query Frame = 2
Query:   14 NFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            ++ +PFVCGCR+LGEA RRI EGAAM+RTKGE GTGNI+EAVRH+R V   +  + +M  DE+ T AK + APY++++Q K+ GRLPVV+F            +MM+LG D             P K A+ IV+  T++ D E + EV
Sbjct:  121 DYTVPFVCGCRDLGEAARRIGEGAAMLRTKGEPGTGNIVEAVRHIREVQAQVNKVVHMSKDELMTEAKNLGAPYEILLQIKENGRLPVVNFAAGGVATPADAALMMELGADGVFVGSGIFKSHHPEKFARAIVQATTYFDDYERIAEV 268          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_GEOKA (Pyridoxal biosynthesis lyase pdxS OS=Geobacillus kaustophilus GN=pdxS PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 8.607e-33
Identity = 70/147 (47.62%), Postives = 92/147 (62.59%), Query Frame = 2
Query:   17 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            F +PFVCGCR+LGEA RRI EGA+M+RTKGE GTGNI+EAVRH+R V   IR + NM +DE+   AK++ AP +++ + K+LGRLPVV+F            +MM LG D             P K A+ IV   THY D E++  +
Sbjct:  121 FTVPFVCGCRDLGEAARRIAEGASMLRTKGEPGTGNIVEAVRHMRKVNAQIRKVVNMSEDELVAEAKQLGAPVEVLREIKRLGRLPVVNFAAGGVATPADAALMMHLGADGVFVGSGIFKSENPEKYARAIVEATTHYEDYELIAHL 267          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_PARUW (Pyridoxal biosynthesis lyase pdxS OS=Protochlamydia amoebophila (strain UWE25) GN=pdxS PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.917e-32
Identity = 71/148 (47.97%), Postives = 92/148 (62.16%), Query Frame = 2
Query:   11 HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGE 454
            H F++PFVCGCR+LGEALRRI EGAAMIRTKGEAGTGN++EAVRH+R++  +IR L  MD  E+   AK++ AP+ LV    + G LPV +F            +MMQLG              +P KRA+ IV   T + +PE L +
Sbjct:  124 HIFKVPFVCGCRDLGEALRRIGEGAAMIRTKGEAGTGNVVEAVRHMRAINREIRHLMLMDSSELMAEAKRLGAPFHLVQMVAKSGVLPVPNFAAGGIATPADAALMMQLGAQSVFVGSGIFKSEDPAKRARAIVGATTFFQNPEKLAQ 271          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_MYCPA (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium paratuberculosis GN=pdxS PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.504e-32
Identity = 68/147 (46.26%), Postives = 94/147 (63.95%), Query Frame = 2
Query:   17 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            F +PFVCG  NLGEALRRI EGAAMIR+KGEAGTG++  A  H+R++ G+IR L ++ +DE++  AK++ APY+LV++  + G+LPV  F            MMMQLG +            +P +RA  IV+  T Y DP+VL +V
Sbjct:  130 FTVPFVCGATNLGEALRRINEGAAMIRSKGEAGTGDVSNATTHMRAIGGEIRRLMSLSEDELYVAAKELQAPYELVVEVARAGKLPVTLFTAGGIATPADAAMMMQLGAEGVFVGSGIFKSGDPAQRAAAIVKATTFYDDPDVLAKV 276          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_MYCA1 (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium avium (strain 104) GN=pdxS PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.504e-32
Identity = 68/147 (46.26%), Postives = 94/147 (63.95%), Query Frame = 2
Query:   17 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            F +PFVCG  NLGEALRRI EGAAMIR+KGEAGTG++  A  H+R++ G+IR L ++ +DE++  AK++ APY+LV++  + G+LPV  F            MMMQLG +            +P +RA  IV+  T Y DP+VL +V
Sbjct:  130 FTVPFVCGATNLGEALRRINEGAAMIRSKGEAGTGDVSNATTHMRAIGGEIRRLMSLSEDELYVAAKELQAPYELVVEVARAGKLPVTLFTAGGIATPADAAMMMQLGAEGVFVGSGIFKSGDPAQRAAAIVKATTFYDDPDVLAKV 276          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_MYCLE (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium leprae GN=pdxS PE=3 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 3.271e-32
Identity = 68/147 (46.26%), Postives = 93/147 (63.27%), Query Frame = 2
Query:   17 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            F +PFVCG  NLGEALRRI EGAAMIR+KGEAGTG++  A  H+R++ GDIR L ++ +DE++  AK++ APY+LV++  +  +LPV  F            MMMQLG +            +P +RA  IV+  T Y DP+VL +V
Sbjct:  134 FTVPFVCGATNLGEALRRINEGAAMIRSKGEAGTGDVSNATTHMRAIAGDIRRLTSLSEDELYVAAKELHAPYELVIEVARTNKLPVTLFTAGGIATPADAAMMMQLGAEGIFVGSGIFKSSDPAQRAAAIVKATTFYDDPDVLAKV 280          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_MYCLB (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium leprae (strain Br4923) GN=pdxS PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.271e-32
Identity = 68/147 (46.26%), Postives = 93/147 (63.27%), Query Frame = 2
Query:   17 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            F +PFVCG  NLGEALRRI EGAAMIR+KGEAGTG++  A  H+R++ GDIR L ++ +DE++  AK++ APY+LV++  +  +LPV  F            MMMQLG +            +P +RA  IV+  T Y DP+VL +V
Sbjct:  134 FTVPFVCGATNLGEALRRINEGAAMIRSKGEAGTGDVSNATTHMRAIAGDIRRLTSLSEDELYVAAKELHAPYELVIEVARTNKLPVTLFTAGGIATPADAAMMMQLGAEGIFVGSGIFKSSDPAQRAAAIVKATTFYDDPDVLAKV 280          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_BACCI (Pyridoxal biosynthesis lyase pdxS OS=Bacillus circulans GN=pdxS PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.271e-32
Identity = 67/148 (45.27%), Postives = 94/148 (63.51%), Query Frame = 2
Query:   14 NFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            +F +PFVCG +++GEALRRI EGA+M+RTKGE GTGNI+EAVRH+R +   IR ++++  DE++  AK + APYDLV+   + G+LPVV+F            +MM+LG D             P K A+ IV   THY D +++ EV
Sbjct:  119 DFTVPFVCGAKDIGEALRRINEGASMLRTKGEPGTGNIVEAVRHMRLIQSQIRKIQSLAKDELYAEAKNLGAPYDLVLYIHENGKLPVVNFAAGGVATPSDAALMMELGADGVFVGSGIFKSDSPEKFARAIVEATTHYKDYKLIAEV 266          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_MYCTU (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium tuberculosis GN=pdxS PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.271e-32
Identity = 70/148 (47.30%), Postives = 92/148 (62.16%), Query Frame = 2
Query:   14 NFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            NF +PFVCG  NLGEALRRI EGAAMIR+KGEAGTG++  A  H+R++ G+IR L +M +DE+F  AK++ APY+LV +  + G+LPV  F            MMMQLG +             P  RA  IV+  T + DP+VL +V
Sbjct:  125 NFTVPFVCGATNLGEALRRISEGAAMIRSKGEAGTGDVSNATTHMRAIGGEIRRLTSMSEDELFVAAKELQAPYELVAEVARAGKLPVTLFTAGGIATPADAAMMMQLGAEGVFVGSGIFKSGAPEHRAAAIVKATTFFDDPDVLAKV 272          
The following BLAST results are available for this feature:
BLAST of EY665744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 207
Match NameE-valueIdentityDescription
PDXS_BACHD6.590e-3347.97Pyridoxal biosynthesis lyase pdxS OS=Bacillus halo... [more]
PDXS_OCEIH8.607e-3346.62Pyridoxal biosynthesis lyase pdxS OS=Oceanobacillu... [more]
PDXS_GEOKA8.607e-3347.62Pyridoxal biosynthesis lyase pdxS OS=Geobacillus k... [more]
PDXS_PARUW1.917e-3247.97Pyridoxal biosynthesis lyase pdxS OS=Protochlamydi... [more]
PDXS_MYCPA2.504e-3246.26Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium... [more]
PDXS_MYCA12.504e-3246.26Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium... [more]
PDXS_MYCLE3.271e-3246.26Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium... [more]
PDXS_MYCLB3.271e-3246.26Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium... [more]
PDXS_BACCI3.271e-3245.27Pyridoxal biosynthesis lyase pdxS OS=Bacillus circ... [more]
PDXS_MYCTU4.271e-3247.30Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-B02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665744 ID=EY665744; Name=EY665744; organism=Citrus sinensis; type=EST; length=873bp
CCCGCGTCCGCACAACTTTCGTATCCCCTTCGTATGCGGCTGCCGGAACT
TGGGGGAAGCTTTGAGGAGGATTCGCGAAGGCGCGGCGATGATAAGAACG
AAGGGCGAGGCCGGAACGGGGAATATTATCGAAGCGGTGAGGCACGTGCG
GTCTGTGATGGGGGATATTAGGGTTCTGAGGAACATGGACGATGACGAGG
TGTTCACTTTCGCAAAGAAGATAGCGGCGCCGTACGACTTGGTGATGCAG
ACGAAGCAGCTGGGGCGGTTGCCGGTGGTGCACTTCGCAGCGGGAGGAGT
GGCGACGCCGGCGGATGCAGCGATGATGATGCAACTTGGATGCGACGGAG
TGTTTGTCGGGTCGGGCGTGTTTAAGAGCGGGGAACCGGTGAAGCGGGCC
CAGGGAATTGTACGGGGGGTGACTCATTACAGTGACCCGGAGGTGTTGGG
GGAGGTGGAACCTGCCGGTTGCGCGACGCCCTGGGGGCTCTTATTTCTCA
GCGCACCCAACGATGCAGAAGTCCCACATCCCTCTCACACAAAATCATAC
TAAGACCATCCACAACCCCCTTATATGCACTATTATACTTTCCGACACCC
CTATTCCCGTACGCAAACTGTGATCGCCCCGGATACGCCCGCGCCTTCTG
CCCGACATTCGGGGCACCCCCCAGCTCCCCACCGCTCTGTCGCTTTTCTA
CTTTGTTGCTCGTGCCTTCTCCTAATTTGCCCCTCGTCCTCCATCTTCAT
CTCTGCCCCCTATTCTGTTCCTGCCACATGCGTCATCTGCACACGTCAGC
ATCTGTACCTTTGATCTGCACATAAAGACACGTCTACGAAGCGGGAAATT
TTCCTCATGTTTCCTCGCCCCAG
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