EY665744

Overview
NameEY665744
Unique NameEY665744
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_MYCS2 (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium smegmatis GN=pdxS PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.579e-32
Identity = 69/147 (46.94%), Postives = 92/147 (62.59%), Query Frame = 2 
Query:   17 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            F +PFVCG  NLGEALRRI EGAAMIR+KGEAGTG++  A  H+R + G+IR L +M +DE++  AK++ APY+LV++  + G+LPV  F            MMMQLG +             P +RA  IV+  T Y DP+VL +V
Sbjct:  130 FTVPFVCGATNLGEALRRITEGAAMIRSKGEAGTGDVSNATTHMRKIGGEIRRLTSMSEDELYVAAKELQAPYELVVEVARAGKLPVTLFTAGGIATPADAAMMMQLGAEGVFVGSGIFKSGNPEQRAAAIVKATTFYDDPDVLAKV 276
[Close]
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_GEOTN (Pyridoxal biosynthesis lyase pdxS OS=Geobacillus thermodenitrificans (strain NG80-2) GN=pdxS PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.579e-32
Identity = 68/147 (46.26%), Postives = 92/147 (62.59%), Query Frame = 2 
Query:   17 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            F +PFVCGCR+LGEA RRI EGA+M+RTKGE GTGNI+EAVRH+R V   IR + +M +DE+   AK++ AP +++ + K++GRLPVV+F            +MM LG D             P K A+ IV   THY D E++  +
Sbjct:  121 FTVPFVCGCRDLGEAARRIAEGASMLRTKGEPGTGNIVEAVRHMRKVNAQIRKVVSMSEDELVAEAKQLGAPVEVLREIKRIGRLPVVNFAAGGVATPADAALMMHLGADGVFVGSGIFKSENPEKYARAIVEATTHYEDYELIAHL 267
[Close]
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_GEOSW (Pyridoxal biosynthesis lyase pdxS OS=Geobacillus sp. (strain WCH70) GN=pdxS PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.579e-32
Identity = 69/147 (46.94%), Postives = 91/147 (61.90%), Query Frame = 2 
Query:   17 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            F +PFVCGCR+LGEA RRI EGA+M+RTKGE GTGNI+EAVRH+R V   IR + +M +DE+ T AK + AP +++ + K+LGRLPVV+F            +MM LG D             P K A+ IV    HY D E++  +
Sbjct:  121 FTVPFVCGCRDLGEASRRIAEGASMLRTKGEPGTGNIVEAVRHMRKVNAQIRKVVSMSEDELVTEAKNLGAPVEVLREIKRLGRLPVVNFAAGGIATPADAALMMHLGADGVFVGSGIFKSENPEKYARAIVEATAHYEDYELIAHL 267
[Close]
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_STRZT (Pyridoxal biosynthesis lyase pdxS OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=pdxS PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 9.516e-32
Identity = 65/147 (44.22%), Postives = 98/147 (66.67%), Query Frame = 2 
Query:   17 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            F++PFVCG ++LGEALRRI EGA+MIRTKGE GTG+I++AVRH+R +  +IR ++N+ +DE++  AK +  P +LV    + G+LPVV+F            +MMQLG +            +PVKRA  IV+ VT++ +P++L ++
Sbjct:  120 FQVPFVCGAKDLGEALRRIAEGASMIRTKGEPGTGDIVQAVRHMRMMNQEIRRIQNLREDELYVAAKDLQVPVELVQYVHEHGKLPVVNFAAGGVATPADAALMMQLGAEGVFVGSGIFKSGDPVKRASAIVKAVTNFRNPQILAQI 266
[Close]
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_STRZP (Pyridoxal biosynthesis lyase pdxS OS=Streptococcus pneumoniae (strain P1031) GN=pdxS PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 9.516e-32
Identity = 65/147 (44.22%), Postives = 98/147 (66.67%), Query Frame = 2 
Query:   17 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            F++PFVCG ++LGEALRRI EGA+MIRTKGE GTG+I++AVRH+R +  +IR ++N+ +DE++  AK +  P +LV    + G+LPVV+F            +MMQLG +            +PVKRA  IV+ VT++ +P++L ++
Sbjct:  120 FQVPFVCGAKDLGEALRRIAEGASMIRTKGEPGTGDIVQAVRHMRMMNQEIRRIQNLREDELYVAAKDLQVPVELVQYVHEHGKLPVVNFAAGGVATPADAALMMQLGAEGVFVGSGIFKSGDPVKRASAIVKAVTNFRNPQILAQI 266
[Close]
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_STRZJ (Pyridoxal biosynthesis lyase pdxS OS=Streptococcus pneumoniae (strain JJA) GN=pdxS PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 9.516e-32
Identity = 65/147 (44.22%), Postives = 98/147 (66.67%), Query Frame = 2 
Query:   17 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            F++PFVCG ++LGEALRRI EGA+MIRTKGE GTG+I++AVRH+R +  +IR ++N+ +DE++  AK +  P +LV    + G+LPVV+F            +MMQLG +            +PVKRA  IV+ VT++ +P++L ++
Sbjct:  120 FQVPFVCGAKDLGEALRRIAEGASMIRTKGEPGTGDIVQAVRHMRMMNQEIRRIQNLREDELYVAAKDLQVPVELVQYVHEHGKLPVVNFAAGGVATPADAALMMQLGAEGVFVGSGIFKSGDPVKRASAIVKAVTNFRNPQILAQI 266
[Close]
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_STRR6 (Pyridoxal biosynthesis lyase pdxS OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=pdxS PE=3 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 9.516e-32
Identity = 65/147 (44.22%), Postives = 98/147 (66.67%), Query Frame = 2 
Query:   17 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            F++PFVCG ++LGEALRRI EGA+MIRTKGE GTG+I++AVRH+R +  +IR ++N+ +DE++  AK +  P +LV    + G+LPVV+F            +MMQLG +            +PVKRA  IV+ VT++ +P++L ++
Sbjct:  120 FQVPFVCGAKDLGEALRRIAEGASMIRTKGEPGTGDIVQAVRHMRMMNQEIRRIQNLREDELYVAAKDLQVPVELVQYVHEHGKLPVVNFAAGGVATPADAALMMQLGAEGVFVGSGIFKSGDPVKRASAIVKAVTNFRNPQILAQI 266
[Close]
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_STRPN (Pyridoxal biosynthesis lyase pdxS OS=Streptococcus pneumoniae GN=pdxS PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 9.516e-32
Identity = 65/147 (44.22%), Postives = 98/147 (66.67%), Query Frame = 2 
Query:   17 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            F++PFVCG ++LGEALRRI EGA+MIRTKGE GTG+I++AVRH+R +  +IR ++N+ +DE++  AK +  P +LV    + G+LPVV+F            +MMQLG +            +PVKRA  IV+ VT++ +P++L ++
Sbjct:  120 FQVPFVCGAKDLGEALRRIAEGASMIRTKGEPGTGDIVQAVRHMRMMNQEIRRIQNLREDELYVAAKDLQVPVELVQYVHEHGKLPVVNFAAGGVATPADAALMMQLGAEGVFVGSGIFKSGDPVKRASAIVKAVTNFRNPQILAQI 266
[Close]
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_STRPJ (Pyridoxal biosynthesis lyase pdxS OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=pdxS PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 9.516e-32
Identity = 65/147 (44.22%), Postives = 98/147 (66.67%), Query Frame = 2 
Query:   17 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            F++PFVCG ++LGEALRRI EGA+MIRTKGE GTG+I++AVRH+R +  +IR ++N+ +DE++  AK +  P +LV    + G+LPVV+F            +MMQLG +            +PVKRA  IV+ VT++ +P++L ++
Sbjct:  120 FQVPFVCGAKDLGEALRRIAEGASMIRTKGEPGTGDIVQAVRHMRMMNQEIRRIQNLREDELYVAAKDLQVPVELVQYVHEHGKLPVVNFAAGGVATPADAALMMQLGAEGVFVGSGIFKSGDPVKRASAIVKAVTNFRNPQILAQI 266
[Close]
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_STRPI (Pyridoxal biosynthesis lyase pdxS OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=pdxS PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 9.516e-32
Identity = 65/147 (44.22%), Postives = 98/147 (66.67%), Query Frame = 2 
Query:   17 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            F++PFVCG ++LGEALRRI EGA+MIRTKGE GTG+I++AVRH+R +  +IR ++N+ +DE++  AK +  P +LV    + G+LPVV+F            +MMQLG +            +PVKRA  IV+ VT++ +P++L ++
Sbjct:  120 FQVPFVCGAKDLGEALRRIAEGASMIRTKGEPGTGDIVQAVRHMRMMNQEIRRIQNLREDELYVAAKDLQVPVELVQYVHEHGKLPVVNFAAGGVATPADAALMMQLGAEGVFVGSGIFKSGDPVKRASAIVKAVTNFRNPQILAQI 266
The following BLAST results are available for this feature:
BLAST of EY665744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 207
Match NameE-valueIdentityDescription
PDXS_MYCS25.579e-3246.94Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium... [more]
PDXS_GEOTN5.579e-3246.26Pyridoxal biosynthesis lyase pdxS OS=Geobacillus t... [more]
PDXS_GEOSW5.579e-3246.94Pyridoxal biosynthesis lyase pdxS OS=Geobacillus s... [more]
PDXS_STRZT9.516e-3244.22Pyridoxal biosynthesis lyase pdxS OS=Streptococcus... [more]
PDXS_STRZP9.516e-3244.22Pyridoxal biosynthesis lyase pdxS OS=Streptococcus... [more]
PDXS_STRZJ9.516e-3244.22Pyridoxal biosynthesis lyase pdxS OS=Streptococcus... [more]
PDXS_STRR69.516e-3244.22Pyridoxal biosynthesis lyase pdxS OS=Streptococcus... [more]
PDXS_STRPN9.516e-3244.22Pyridoxal biosynthesis lyase pdxS OS=Streptococcus... [more]
PDXS_STRPJ9.516e-3244.22Pyridoxal biosynthesis lyase pdxS OS=Streptococcus... [more]
PDXS_STRPI9.516e-3244.22Pyridoxal biosynthesis lyase pdxS OS=Streptococcus... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-B02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665744 ID=EY665744; Name=EY665744; organism=Citrus sinensis; type=EST; length=873bp
CCCGCGTCCGCACAACTTTCGTATCCCCTTCGTATGCGGCTGCCGGAACT
TGGGGGAAGCTTTGAGGAGGATTCGCGAAGGCGCGGCGATGATAAGAACG
AAGGGCGAGGCCGGAACGGGGAATATTATCGAAGCGGTGAGGCACGTGCG
GTCTGTGATGGGGGATATTAGGGTTCTGAGGAACATGGACGATGACGAGG
TGTTCACTTTCGCAAAGAAGATAGCGGCGCCGTACGACTTGGTGATGCAG
ACGAAGCAGCTGGGGCGGTTGCCGGTGGTGCACTTCGCAGCGGGAGGAGT
GGCGACGCCGGCGGATGCAGCGATGATGATGCAACTTGGATGCGACGGAG
TGTTTGTCGGGTCGGGCGTGTTTAAGAGCGGGGAACCGGTGAAGCGGGCC
CAGGGAATTGTACGGGGGGTGACTCATTACAGTGACCCGGAGGTGTTGGG
GGAGGTGGAACCTGCCGGTTGCGCGACGCCCTGGGGGCTCTTATTTCTCA
GCGCACCCAACGATGCAGAAGTCCCACATCCCTCTCACACAAAATCATAC
TAAGACCATCCACAACCCCCTTATATGCACTATTATACTTTCCGACACCC
CTATTCCCGTACGCAAACTGTGATCGCCCCGGATACGCCCGCGCCTTCTG
CCCGACATTCGGGGCACCCCCCAGCTCCCCACCGCTCTGTCGCTTTTCTA
CTTTGTTGCTCGTGCCTTCTCCTAATTTGCCCCTCGTCCTCCATCTTCAT
CTCTGCCCCCTATTCTGTTCCTGCCACATGCGTCATCTGCACACGTCAGC
ATCTGTACCTTTGATCTGCACATAAAGACACGTCTACGAAGCGGGAAATT
TTCCTCATGTTTCCTCGCCCCAG
back to top