EY665744

Overview
NameEY665744
Unique NameEY665744
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_HELMI (Pyridoxal biosynthesis lyase pdxS OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=pdxS PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 3.054e-38
Identity = 78/149 (52.35%), Postives = 100/149 (67.11%), Query Frame = 2
Query:   11 HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            ++F++PFVCG RNLGEALRRI EGAAMIRTKGE GTGN++EAVRH R VM +IR L  +  +E  +FAK+I APY+LV    + GRLPVV+F            +MMQLG D            +P++RA+ IV   THY+DP+V+ EV
Sbjct:  120 NDFKVPFVCGARNLGEALRRIGEGAAMIRTKGEPGTGNVVEAVRHARQVMSEIRKLTTLPKEERMSFAKEIGAPYELVCLVAETGRLPVVNFAAGGIATPADAALMMQLGVDGVFVGSGIFKSGDPIRRAKAIVAATTHYNDPKVIAEV 268          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_DICT6 (Pyridoxal biosynthesis lyase pdxS OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=pdxS PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 3.054e-38
Identity = 79/149 (53.02%), Postives = 102/149 (68.46%), Query Frame = 2
Query:   11 HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            H F++PFVCG R+LGEALRRI EGAAMIRTKGEAGTGN++EAVRH+R +M +IR L  + D+E+   AK++ AP +LV++TK+LGRLPVV+F            +MM LG D            +P KRA+ IV  VT+Y DP VL E+
Sbjct:  120 HLFKVPFVCGARDLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHMRQIMDEIRALALLPDEELVAKAKELGAPLELVIETKKLGRLPVVNFAAGGIATPADAALMMHLGADGVFVGSGIFKSKDPRKRARAIVLAVTYYDDPYVLAEI 268          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_DICTD (Pyridoxal biosynthesis lyase pdxS OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=pdxS PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 5.209e-38
Identity = 79/149 (53.02%), Postives = 101/149 (67.79%), Query Frame = 2
Query:   11 HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            H F++PFVCG R+LGEALRRI EGAAMIRTKGEAGTGN++EAVRH+R +M +IR L  + D+E+   AK++ AP DL+++TK+LGRLPVV+F            +MM LG D             P KRA+ IV  VT+Y DP VL E+
Sbjct:  120 HAFKVPFVCGARDLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHMRQIMDEIRSLVLLPDEELVAKAKELGAPLDLIIETKKLGRLPVVNFAAGGIATPADAALMMHLGADGVFVGSGIFKSKNPRKRARAIVLAVTYYDDPYVLAEI 268          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_THET8 (Pyridoxal biosynthesis lyase pdxS OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=pdxS PE=1 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 8.886e-38
Identity = 78/147 (53.06%), Postives = 100/147 (68.03%), Query Frame = 2
Query:   17 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            F++PFVCG RNLGEALRRI EGAAMIRTKGEAGTGN++EAVRH R++  +IR ++++ +DE+  +AK+I AP++LV      GRLPVV+F            +MM LG D            +P KRA+ IVR V HY+DPEVL EV
Sbjct:  120 FKVPFVCGARNLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVHDHGRLPVVNFAAGGIATPADAALMMHLGMDGVFVGSGIFKSGDPRKRARAIVRAVAHYNDPEVLAEV 266          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_THET2 (Pyridoxal biosynthesis lyase pdxS OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=pdxS PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 8.886e-38
Identity = 78/147 (53.06%), Postives = 100/147 (68.03%), Query Frame = 2
Query:   17 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            F++PFVCG RNLGEALRRI EGAAMIRTKGEAGTGN++EAVRH R++  +IR ++++ +DE+  +AK+I AP++LV      GRLPVV+F            +MM LG D            +P KRA+ IVR V HY+DPEVL EV
Sbjct:  120 FKVPFVCGARNLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVHDHGRLPVVNFAAGGIATPADAALMMHLGMDGVFVGSGIFKSGDPRKRARAIVRAVAHYNDPEVLAEV 266          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_NATTJ (Pyridoxal biosynthesis lyase pdxS OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=pdxS PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.980e-37
Identity = 77/149 (51.68%), Postives = 100/149 (67.11%), Query Frame = 2
Query:   11 HNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            + F +PFVCG RNLGEALRR+ EGA+M+RTKGEAGTGN++EAVRH+R+VM  IR ++N+ DDE+ T AK I APYDL+ Q K+ GRLPVV+F            +MMQLG D            +P KRA+ IV    +Y + +VL +V
Sbjct:  120 NKFTVPFVCGARNLGEALRRVGEGASMMRTKGEAGTGNVVEAVRHIRTVMDGIRKVQNLPDDELMTEAKNIGAPYDLIKQVKEEGRLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSGDPEKRAKSIVEATLNYDNYDVLADV 268          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_DEIRA (Pyridoxal biosynthesis lyase pdxS OS=Deinococcus radiodurans GN=pdxS PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.585e-37
Identity = 75/148 (50.68%), Postives = 100/148 (67.57%), Query Frame = 2
Query:   14 NFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            +F++PFVCG +NLGEALRR+ EGA+MIRTKGEAGTGN++EAVRH R+V+GDIR +++   +E+ T A+ + APYDLV      G+LPVV+F            +MMQLG D             P +RAQ IVR VTH+ +P++L EV
Sbjct:  133 DFKVPFVCGAKNLGEALRRVGEGASMIRTKGEAGTGNVVEAVRHARAVLGDIRAVQSRPAEELMTVARDLQAPYDLVQYVHAHGQLPVVNFAAGGVATPADAALMMQLGLDGVFVGSGIFKSANPERRAQAIVRAVTHFQNPDILAEV 280          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_STAAW (Pyridoxal biosynthesis lyase pdxS OS=Staphylococcus aureus (strain MW2) GN=pdxS PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.760e-37
Identity = 77/151 (50.99%), Postives = 97/151 (64.24%), Query Frame = 2
Query:    5 RPHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            R   F +PFVCGCRNLGEA RRI EGAAM+RTKGE GTGNI+EAVRH+R V  ++  L  M+DDE+ TFAK I APY+++ Q K  GRLPVV+F            +MM+LG D            +P K A+ IV+  THY D E++G +
Sbjct:  118 RKDQFTVPFVCGCRNLGEAARRIGEGAAMLRTKGEPGTGNIVEAVRHMRQVNSEVSRLTVMNDDEIMTFAKDIGAPYEILKQIKDNGRLPVVNFAAGGVATPQDAALMMELGADGVFVGSGIFKSEDPEKFAKAIVQATTHYQDYELIGRL 268          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_STAAT (Pyridoxal biosynthesis lyase pdxS OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=pdxS PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.760e-37
Identity = 77/151 (50.99%), Postives = 97/151 (64.24%), Query Frame = 2
Query:    5 RPHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            R   F +PFVCGCRNLGEA RRI EGAAM+RTKGE GTGNI+EAVRH+R V  ++  L  M+DDE+ TFAK I APY+++ Q K  GRLPVV+F            +MM+LG D            +P K A+ IV+  THY D E++G +
Sbjct:  118 RKDQFTVPFVCGCRNLGEAARRIGEGAAMLRTKGEPGTGNIVEAVRHMRQVNSEVSRLTVMNDDEIMTFAKDIGAPYEILKQIKDNGRLPVVNFAAGGVATPQDAALMMELGADGVFVGSGIFKSEDPEKFAKAIVQATTHYQDYELIGRL 268          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_STAAS (Pyridoxal biosynthesis lyase pdxS OS=Staphylococcus aureus (strain MSSA476) GN=pdxS PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.760e-37
Identity = 77/151 (50.99%), Postives = 97/151 (64.24%), Query Frame = 2
Query:    5 RPHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            R   F +PFVCGCRNLGEA RRI EGAAM+RTKGE GTGNI+EAVRH+R V  ++  L  M+DDE+ TFAK I APY+++ Q K  GRLPVV+F            +MM+LG D            +P K A+ IV+  THY D E++G +
Sbjct:  118 RKDQFTVPFVCGCRNLGEAARRIGEGAAMLRTKGEPGTGNIVEAVRHMRQVNSEVSRLTVMNDDEIMTFAKDIGAPYEILKQIKDNGRLPVVNFAAGGVATPQDAALMMELGADGVFVGSGIFKSEDPEKFAKAIVQATTHYQDYELIGRL 268          
The following BLAST results are available for this feature:
BLAST of EY665744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 207
Match NameE-valueIdentityDescription
PDXS_HELMI3.054e-3852.35Pyridoxal biosynthesis lyase pdxS OS=Heliobacteriu... [more]
PDXS_DICT63.054e-3853.02Pyridoxal biosynthesis lyase pdxS OS=Dictyoglomus ... [more]
PDXS_DICTD5.209e-3853.02Pyridoxal biosynthesis lyase pdxS OS=Dictyoglomus ... [more]
PDXS_THET88.886e-3853.06Pyridoxal biosynthesis lyase pdxS OS=Thermus therm... [more]
PDXS_THET28.886e-3853.06Pyridoxal biosynthesis lyase pdxS OS=Thermus therm... [more]
PDXS_NATTJ1.980e-3751.68Pyridoxal biosynthesis lyase pdxS OS=Natranaerobiu... [more]
PDXS_DEIRA2.585e-3750.68Pyridoxal biosynthesis lyase pdxS OS=Deinococcus r... [more]
PDXS_STAAW5.760e-3750.99Pyridoxal biosynthesis lyase pdxS OS=Staphylococcu... [more]
PDXS_STAAT5.760e-3750.99Pyridoxal biosynthesis lyase pdxS OS=Staphylococcu... [more]
PDXS_STAAS5.760e-3750.99Pyridoxal biosynthesis lyase pdxS OS=Staphylococcu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-B02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665744 ID=EY665744; Name=EY665744; organism=Citrus sinensis; type=EST; length=873bp
CCCGCGTCCGCACAACTTTCGTATCCCCTTCGTATGCGGCTGCCGGAACT
TGGGGGAAGCTTTGAGGAGGATTCGCGAAGGCGCGGCGATGATAAGAACG
AAGGGCGAGGCCGGAACGGGGAATATTATCGAAGCGGTGAGGCACGTGCG
GTCTGTGATGGGGGATATTAGGGTTCTGAGGAACATGGACGATGACGAGG
TGTTCACTTTCGCAAAGAAGATAGCGGCGCCGTACGACTTGGTGATGCAG
ACGAAGCAGCTGGGGCGGTTGCCGGTGGTGCACTTCGCAGCGGGAGGAGT
GGCGACGCCGGCGGATGCAGCGATGATGATGCAACTTGGATGCGACGGAG
TGTTTGTCGGGTCGGGCGTGTTTAAGAGCGGGGAACCGGTGAAGCGGGCC
CAGGGAATTGTACGGGGGGTGACTCATTACAGTGACCCGGAGGTGTTGGG
GGAGGTGGAACCTGCCGGTTGCGCGACGCCCTGGGGGCTCTTATTTCTCA
GCGCACCCAACGATGCAGAAGTCCCACATCCCTCTCACACAAAATCATAC
TAAGACCATCCACAACCCCCTTATATGCACTATTATACTTTCCGACACCC
CTATTCCCGTACGCAAACTGTGATCGCCCCGGATACGCCCGCGCCTTCTG
CCCGACATTCGGGGCACCCCCCAGCTCCCCACCGCTCTGTCGCTTTTCTA
CTTTGTTGCTCGTGCCTTCTCCTAATTTGCCCCTCGTCCTCCATCTTCAT
CTCTGCCCCCTATTCTGTTCCTGCCACATGCGTCATCTGCACACGTCAGC
ATCTGTACCTTTGATCTGCACATAAAGACACGTCTACGAAGCGGGAAATT
TTCCTCATGTTTCCTCGCCCCAG
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