EY665744

Overview
NameEY665744
Unique NameEY665744
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_SULIK (Pyridoxal biosynthesis lyase pdxS OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=pdxS PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.627e-25
Identity = 60/148 (40.54%), Postives = 87/148 (58.78%), Query Frame = 2
Query:   17 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEVE 460
            F +PFV G RNLGEALRR  EGA+MIRTKGEAGTGN+ EAV+H++ +  +IR L +M +++    A++   PY LV  T ++ RLP+V+F            +MM LG D            +P +RA+ +V     +  PE++ E +
Sbjct:  163 FSVPFVNGARNLGEALRRTAEGASMIRTKGEAGTGNVSEAVKHMKIINSEIRSLISMSEEDRVKKAREYQVPYQLVELTAKIKRLPIVNFAAGGIATPADAALMMWLGADGLFVGSGIFKSQDPDERAKAVVLAAACWEYPEIVLEAQ 310          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_SULIA (Pyridoxal biosynthesis lyase pdxS OS=Sulfolobus islandicus (strain M.16.27) GN=pdxS PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.627e-25
Identity = 60/148 (40.54%), Postives = 87/148 (58.78%), Query Frame = 2
Query:   17 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEVE 460
            F +PFV G RNLGEALRR  EGA+MIRTKGEAGTGN+ EAV+H++ +  +IR L +M +++    A++   PY LV  T ++ RLP+V+F            +MM LG D            +P +RA+ +V     +  PE++ E +
Sbjct:  163 FSVPFVNGARNLGEALRRTAEGASMIRTKGEAGTGNVSEAVKHMKIINSEIRSLISMSEEDRVKKAREYQVPYQLVELTAKIKRLPIVNFAAGGIATPADAALMMWLGADGLFVGSGIFKSQDPDERAKAVVLAAACWEYPEIVLEAQ 310          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_SULSO (Pyridoxal biosynthesis lyase pdxS OS=Sulfolobus solfataricus GN=pdxS PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.471e-24
Identity = 59/148 (39.86%), Postives = 87/148 (58.78%), Query Frame = 2
Query:   17 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEVE 460
            F +PFV G RNLGEALRR  EGA+MIRTKGEAGTGN+ EAV+H++ +  +IR L +M +++    A++   PY +V  T ++ RLP+V+F            +MM LG D            +P +RA+ +V     +  PE++ E +
Sbjct:  163 FSVPFVNGARNLGEALRRTSEGASMIRTKGEAGTGNVSEAVKHMKIINSEIRSLISMSEEDRVKKAREYQVPYQIVELTAKIKRLPIVNFAAGGIATPADAALMMWLGADGLFVGSGIFKSQDPDERAKAVVLAAACWEYPEIVLEAQ 310          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_SULIN (Pyridoxal biosynthesis lyase pdxS OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=pdxS PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.471e-24
Identity = 60/148 (40.54%), Postives = 87/148 (58.78%), Query Frame = 2
Query:   17 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEVE 460
            F +PFV G RNLGEALRR  EGA+MIRTKGEAGTGN+ EAV+H++ +  +IR L +M +++    A++   PY LV  T ++ RLP+V+F            +MM LG D            +P +RA+ +V     +  PE++ E +
Sbjct:  163 FSVPFVNGARNLGEALRRTVEGASMIRTKGEAGTGNVSEAVKHMKIINSEIRSLISMSEEDRVKKAREYQVPYQLVELTAKIKRLPIVNFAAGGIATPADAALMMWLGADGLFVGSGIFKSQDPDERAKAVVLAAACWEYPEIVLEAQ 310          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_PYRCJ (Pyridoxal biosynthesis lyase pdxS OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=pdxS PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.471e-24
Identity = 60/150 (40.00%), Postives = 85/150 (56.67%), Query Frame = 2
Query:   17 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVF--TFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEVE 460
            F+ PFV G R L EALRRI EGA+MIR+KGEAGTGN+ EAV+H +++ G +R L    DDE +   +A++   P ++V  T  +GR+PV+ F             MM LG D            +P +RA+ IV    ++ DPE + E +
Sbjct:  159 FKTPFVNGARELCEALRRISEGASMIRSKGEAGTGNVAEAVKHFKAIYGAVRDLTAHRDDEEYLRDYARRCQVPLEVVKLTADMGRVPVITFAAGGIATPADAAFMMWLGADGVFVGSGIFKSQDPERRAEAIVLATAYWDDPEAVAEAQ 308          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_THEAC (Pyridoxal biosynthesis lyase pdxS OS=Thermoplasma acidophilum GN=pdxS PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.125e-23
Identity = 73/204 (35.78%), Postives = 96/204 (47.06%), Query Frame = 2
Query:   14 NFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPY-------------------------------------DLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEVEPAGCATPWGLLFLSAPND 514
            N  +P V G RNL EA+RRI EGAAMIRTKGEAGTGNIIEAVRH+R V  +I VL+ M D+++   A  I+A Y                                      ++ Q +++GRLPVV+F            +MM+LG D             P K A+ IV  V +Y D +V+ +        P G+   S P D
Sbjct:  126 NLTVPVVSGARNLPEAVRRIFEGAAMIRTKGEAGTGNIIEAVRHIRKVNEEISVLKRMSDEQLRAVASNISASYFVLREEASKDLMGVEGKLSYDSAYAGMGRSRIEREILAILRQIRRMGRLPVVNFAAGGVATPADGALMMELGADGVFVGSGIFKSPNPEKMARSIVEAVENYRDYDVVEKASEGLQGMP-GVDIESIPKD 328          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_PICTO (Pyridoxal biosynthesis lyase pdxS OS=Picrophilus torridus GN=pdxS PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.861e-19
Identity = 59/184 (32.07%), Postives = 86/184 (46.74%), Query Frame = 2
Query:   17 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDL-------------------------------------VMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            +++P VCG R   EA+RRI EGAAMIRTKGEAGTGNIIEA+RH+R V   I VL  +++ ++   A+ IA+ Y +                                     + + K+  RLPVV+F            +MM++G D            +P + A  IV    +Y D + + +V
Sbjct:  130 YKVPVVCGARTFPEAVRRIFEGAAMIRTKGEAGTGNIIEAMRHIRKVNDGINVLLRLNESDMKKVAENIASSYFILRKETSKELFGYDNFPDMDDLYYGMDSDKIINGILKTLKEIKKYRRLPVVNFAAGGVATPSDAALMMKMGLDGVFVGSGIFKSKDPARMASAIVEAAENYEDYKTIADV 313          
The following BLAST results are available for this feature:
BLAST of EY665744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 207
Match NameE-valueIdentityDescription
PDXS_SULIK8.627e-2540.54Pyridoxal biosynthesis lyase pdxS OS=Sulfolobus is... [more]
PDXS_SULIA8.627e-2540.54Pyridoxal biosynthesis lyase pdxS OS=Sulfolobus is... [more]
PDXS_SULSO1.471e-2439.86Pyridoxal biosynthesis lyase pdxS OS=Sulfolobus so... [more]
PDXS_SULIN1.471e-2440.54Pyridoxal biosynthesis lyase pdxS OS=Sulfolobus is... [more]
PDXS_PYRCJ1.471e-2440.00Pyridoxal biosynthesis lyase pdxS OS=Pyrobaculum c... [more]
PDXS_THEAC2.125e-2335.78Pyridoxal biosynthesis lyase pdxS OS=Thermoplasma ... [more]
PDXS_PICTO1.861e-1932.07Pyridoxal biosynthesis lyase pdxS OS=Picrophilus t... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-B02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665744 ID=EY665744; Name=EY665744; organism=Citrus sinensis; type=EST; length=873bp
CCCGCGTCCGCACAACTTTCGTATCCCCTTCGTATGCGGCTGCCGGAACT
TGGGGGAAGCTTTGAGGAGGATTCGCGAAGGCGCGGCGATGATAAGAACG
AAGGGCGAGGCCGGAACGGGGAATATTATCGAAGCGGTGAGGCACGTGCG
GTCTGTGATGGGGGATATTAGGGTTCTGAGGAACATGGACGATGACGAGG
TGTTCACTTTCGCAAAGAAGATAGCGGCGCCGTACGACTTGGTGATGCAG
ACGAAGCAGCTGGGGCGGTTGCCGGTGGTGCACTTCGCAGCGGGAGGAGT
GGCGACGCCGGCGGATGCAGCGATGATGATGCAACTTGGATGCGACGGAG
TGTTTGTCGGGTCGGGCGTGTTTAAGAGCGGGGAACCGGTGAAGCGGGCC
CAGGGAATTGTACGGGGGGTGACTCATTACAGTGACCCGGAGGTGTTGGG
GGAGGTGGAACCTGCCGGTTGCGCGACGCCCTGGGGGCTCTTATTTCTCA
GCGCACCCAACGATGCAGAAGTCCCACATCCCTCTCACACAAAATCATAC
TAAGACCATCCACAACCCCCTTATATGCACTATTATACTTTCCGACACCC
CTATTCCCGTACGCAAACTGTGATCGCCCCGGATACGCCCGCGCCTTCTG
CCCGACATTCGGGGCACCCCCCAGCTCCCCACCGCTCTGTCGCTTTTCTA
CTTTGTTGCTCGTGCCTTCTCCTAATTTGCCCCTCGTCCTCCATCTTCAT
CTCTGCCCCCTATTCTGTTCCTGCCACATGCGTCATCTGCACACGTCAGC
ATCTGTACCTTTGATCTGCACATAAAGACACGTCTACGAAGCGGGAAATT
TTCCTCATGTTTCCTCGCCCCAG
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