EY665744

Overview
NameEY665744
Unique NameEY665744
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_CLOAB (Pyridoxal biosynthesis lyase pdxS OS=Clostridium acetobutylicum GN=pdxS PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.160e-35
Identity = 74/147 (50.34%), Postives = 97/147 (65.99%), Query Frame = 2
Query:   17 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            F++PFVCG RNLGEALRRI EGA+MIRTKGEAGTGN++EAV+H+R+VM +IR ++N   +E+ T AK++ APYDLV      GRLPVV+F            +M++LG +             P KRA+ IV    +Y DP+VL EV
Sbjct:  120 FKVPFVCGARNLGEALRRIGEGASMIRTKGEAGTGNVVEAVKHMRTVMDEIRRVKNAAKEEIMTIAKELGAPYDLVQYVWMNGRLPVVNFAAGGVATPADAALMIRLGAEGVFVGSGIFKSENPEKRARAIVMAAAYYDDPKVLEEV 266          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_FRATW (Pyridoxal biosynthesis lyase pdxS OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=pdxS PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.128e-35
Identity = 74/148 (50.00%), Postives = 96/148 (64.86%), Query Frame = 2
Query:   14 NFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            +F++PFVCGC NLGEALRRI EGAA+IRTKGEAGTGNI+EAVR +R V  DI  ++N D  E+   AK + APYDLV    + G+LPV +F            +MMQLG +            +P+KRA+ IV  VT+Y+D ++L EV
Sbjct:  117 SFKVPFVCGCTNLGEALRRIGEGAALIRTKGEAGTGNIVEAVRQLRQVNKDINYIKNADKSELMAIAKNLQAPYDLVTYVHKNGKLPVPNFSAGGVATPADAALMMQLGAESVFVGSGIFKSADPLKRARAIVSAVTYYNDAKILAEV 264          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_FRATT (Pyridoxal biosynthesis lyase pdxS OS=Francisella tularensis subsp. tularensis GN=pdxS PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.128e-35
Identity = 74/148 (50.00%), Postives = 96/148 (64.86%), Query Frame = 2
Query:   14 NFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            +F++PFVCGC NLGEALRRI EGAA+IRTKGEAGTGNI+EAVR +R V  DI  ++N D  E+   AK + APYDLV    + G+LPV +F            +MMQLG +            +P+KRA+ IV  VT+Y+D ++L EV
Sbjct:  117 SFKVPFVCGCTNLGEALRRIGEGAALIRTKGEAGTGNIVEAVRQLRQVNKDINYIKNADKSELMAIAKNLQAPYDLVTYVHKNGKLPVPNFSAGGVATPADAALMMQLGAESVFVGSGIFKSADPLKRARAIVSAVTYYNDAKILAEV 264          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_FRATO (Pyridoxal biosynthesis lyase pdxS OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=pdxS PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.128e-35
Identity = 74/148 (50.00%), Postives = 96/148 (64.86%), Query Frame = 2
Query:   14 NFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            +F++PFVCGC NLGEALRRI EGAA+IRTKGEAGTGNI+EAVR +R V  DI  ++N D  E+   AK + APYDLV    + G+LPV +F            +MMQLG +            +P+KRA+ IV  VT+Y+D ++L EV
Sbjct:  117 SFKVPFVCGCTNLGEALRRIGEGAALIRTKGEAGTGNIVEAVRQLRQVNKDINYIKNADKSELMAIAKNLQAPYDLVTYVHKNGKLPVPNFSAGGVATPADAALMMQLGAESVFVGSGIFKSADPLKRARAIVSAVTYYNDAKILAEV 264          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_FRATN (Pyridoxal biosynthesis lyase pdxS OS=Francisella tularensis subsp. novicida (strain U112) GN=pdxS PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.128e-35
Identity = 74/148 (50.00%), Postives = 96/148 (64.86%), Query Frame = 2
Query:   14 NFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            +F++PFVCGC NLGEALRRI EGAA+IRTKGEAGTGNI+EAVR +R V  DI  ++N D  E+   AK + APYDLV    + G+LPV +F            +MMQLG +            +P+KRA+ IV  VT+Y+D ++L EV
Sbjct:  117 SFKVPFVCGCTNLGEALRRIGEGAALIRTKGEAGTGNIVEAVRQLRQVNKDINYIKNADKSELMAIAKNLQAPYDLVTYVHKNGKLPVPNFSAGGVATPADAALMMQLGAESVFVGSGIFKSADPLKRARAIVSAVTYYNDAKILAEV 264          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_FRATH (Pyridoxal biosynthesis lyase pdxS OS=Francisella tularensis subsp. holarctica (strain LVS) GN=pdxS PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.128e-35
Identity = 74/148 (50.00%), Postives = 96/148 (64.86%), Query Frame = 2
Query:   14 NFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            +F++PFVCGC NLGEALRRI EGAA+IRTKGEAGTGNI+EAVR +R V  DI  ++N D  E+   AK + APYDLV    + G+LPV +F            +MMQLG +            +P+KRA+ IV  VT+Y+D ++L EV
Sbjct:  117 SFKVPFVCGCTNLGEALRRIGEGAALIRTKGEAGTGNIVEAVRQLRQVNKDINYIKNADKSELMAIAKNLQAPYDLVTYVHKNGKLPVPNFSAGGVATPADAALMMQLGAESVFVGSGIFKSADPLKRARAIVSAVTYYNDAKILAEV 264          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_FRATF (Pyridoxal biosynthesis lyase pdxS OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=pdxS PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.128e-35
Identity = 74/148 (50.00%), Postives = 96/148 (64.86%), Query Frame = 2
Query:   14 NFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            +F++PFVCGC NLGEALRRI EGAA+IRTKGEAGTGNI+EAVR +R V  DI  ++N D  E+   AK + APYDLV    + G+LPV +F            +MMQLG +            +P+KRA+ IV  VT+Y+D ++L EV
Sbjct:  117 SFKVPFVCGCTNLGEALRRIGEGAALIRTKGEAGTGNIVEAVRQLRQVNKDINYIKNADKSELMAIAKNLQAPYDLVTYVHKNGKLPVPNFSAGGVATPADAALMMQLGAESVFVGSGIFKSADPLKRARAIVSAVTYYNDAKILAEV 264          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_FRAT1 (Pyridoxal biosynthesis lyase pdxS OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=pdxS PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.128e-35
Identity = 74/148 (50.00%), Postives = 96/148 (64.86%), Query Frame = 2
Query:   14 NFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            +F++PFVCGC NLGEALRRI EGAA+IRTKGEAGTGNI+EAVR +R V  DI  ++N D  E+   AK + APYDLV    + G+LPV +F            +MMQLG +            +P+KRA+ IV  VT+Y+D ++L EV
Sbjct:  117 SFKVPFVCGCTNLGEALRRIGEGAALIRTKGEAGTGNIVEAVRQLRQVNKDINYIKNADKSELMAIAKNLQAPYDLVTYVHKNGKLPVPNFSAGGVATPADAALMMQLGAESVFVGSGIFKSADPLKRARAIVSAVTYYNDAKILAEV 264          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_CLONO (Pyridoxal biosynthesis lyase pdxS (Fragment) OS=Clostridium novyi GN=pdxS PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.128e-35
Identity = 74/147 (50.34%), Postives = 95/147 (64.63%), Query Frame = 2
Query:   17 FRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            F +PFVCG RNLGEALRRI EGA MIRTKGEAGTGN+IEAVRH+R++   IR L+ M  +E+   AK++ APYDLV   ++ G+LPV++F            +MMQLGCD             P KRA+ IV  V +Y++P  + EV
Sbjct:   63 FNVPFVCGARNLGEALRRIGEGACMIRTKGEAGTGNVIEAVRHMRTIQSQIRKLKVMPKEELMIAAKELGAPYDLVEYVRENGKLPVINFAAGGIATPADAALMMQLGCDGVFVGSGIFKSENPAKRAKAIVEAVKNYNNPLKIAEV 209          
BLAST of EY665744 vs. ExPASy Swiss-Prot
Match: PDXS_CLOBL (Pyridoxal biosynthesis lyase pdxS OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=pdxS PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.128e-35
Identity = 70/148 (47.30%), Postives = 100/148 (67.57%), Query Frame = 2
Query:   14 NFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXEPVKRAQGIVRGVTHYSDPEVLGEV 457
            +F++PFVCG RNLGEALRRI EGA+MIRTKGEAGTGN++EAVRH+R++  ++R L+    +E+ T AK++ AP++L+    + G+LPV++F            +MMQLGCD             P KRA+ IV+  T++ DP+VL +V
Sbjct:  118 DFKVPFVCGARNLGEALRRIGEGASMIRTKGEAGTGNVVEAVRHMRTISSEMRKLQLTPKEELMTVAKEMGAPFNLIEYVAEKGKLPVINFAAGGIATPADAALMMQLGCDGIFVGSGIFKSDSPEKRAKAIVKATTYFKDPDVLAKV 265          
The following BLAST results are available for this feature:
BLAST of EY665744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 207
Match NameE-valueIdentityDescription
PDXS_CLOAB3.160e-3550.34Pyridoxal biosynthesis lyase pdxS OS=Clostridium a... [more]
PDXS_FRATW4.128e-3550.00Pyridoxal biosynthesis lyase pdxS OS=Francisella t... [more]
PDXS_FRATT4.128e-3550.00Pyridoxal biosynthesis lyase pdxS OS=Francisella t... [more]
PDXS_FRATO4.128e-3550.00Pyridoxal biosynthesis lyase pdxS OS=Francisella t... [more]
PDXS_FRATN4.128e-3550.00Pyridoxal biosynthesis lyase pdxS OS=Francisella t... [more]
PDXS_FRATH4.128e-3550.00Pyridoxal biosynthesis lyase pdxS OS=Francisella t... [more]
PDXS_FRATF4.128e-3550.00Pyridoxal biosynthesis lyase pdxS OS=Francisella t... [more]
PDXS_FRAT14.128e-3550.00Pyridoxal biosynthesis lyase pdxS OS=Francisella t... [more]
PDXS_CLONO4.128e-3550.34Pyridoxal biosynthesis lyase pdxS (Fragment) OS=Cl... [more]
PDXS_CLOBL4.128e-3547.30Pyridoxal biosynthesis lyase pdxS OS=Clostridium b... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-B02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665744 ID=EY665744; Name=EY665744; organism=Citrus sinensis; type=EST; length=873bp
CCCGCGTCCGCACAACTTTCGTATCCCCTTCGTATGCGGCTGCCGGAACT
TGGGGGAAGCTTTGAGGAGGATTCGCGAAGGCGCGGCGATGATAAGAACG
AAGGGCGAGGCCGGAACGGGGAATATTATCGAAGCGGTGAGGCACGTGCG
GTCTGTGATGGGGGATATTAGGGTTCTGAGGAACATGGACGATGACGAGG
TGTTCACTTTCGCAAAGAAGATAGCGGCGCCGTACGACTTGGTGATGCAG
ACGAAGCAGCTGGGGCGGTTGCCGGTGGTGCACTTCGCAGCGGGAGGAGT
GGCGACGCCGGCGGATGCAGCGATGATGATGCAACTTGGATGCGACGGAG
TGTTTGTCGGGTCGGGCGTGTTTAAGAGCGGGGAACCGGTGAAGCGGGCC
CAGGGAATTGTACGGGGGGTGACTCATTACAGTGACCCGGAGGTGTTGGG
GGAGGTGGAACCTGCCGGTTGCGCGACGCCCTGGGGGCTCTTATTTCTCA
GCGCACCCAACGATGCAGAAGTCCCACATCCCTCTCACACAAAATCATAC
TAAGACCATCCACAACCCCCTTATATGCACTATTATACTTTCCGACACCC
CTATTCCCGTACGCAAACTGTGATCGCCCCGGATACGCCCGCGCCTTCTG
CCCGACATTCGGGGCACCCCCCAGCTCCCCACCGCTCTGTCGCTTTTCTA
CTTTGTTGCTCGTGCCTTCTCCTAATTTGCCCCTCGTCCTCCATCTTCAT
CTCTGCCCCCTATTCTGTTCCTGCCACATGCGTCATCTGCACACGTCAGC
ATCTGTACCTTTGATCTGCACATAAAGACACGTCTACGAAGCGGGAAATT
TTCCTCATGTTTCCTCGCCCCAG
back to top