EL492543
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_RHOS5 (30S ribosomal protein S16 OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=rpsP PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.295e-18 Identity = 45/78 (57.69%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 13 IRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 246 IRLAR G K +P Y ++A+DSR PRDG+ LE LG YNPL +D R+ +N +RV+YWLS GAQP+D V R L AGL Sbjct: 5 IRLARGGSKKRPHYSIVASDSRMPRDGRFLEKLGTYNPLLAKDSEDRIKMNVERVQYWLSQGAQPTDRVARFLEAAGL 82
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_OLICO (30S ribosomal protein S16 OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=rpsP PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.295e-18 Identity = 46/80 (57.50%), Postives = 57/80 (71.25%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 246 VVIRLAR G K +P Y V+ ADSR PRDG+ +E LGY+NPL +D R+ L+ D+VK WL+ GAQPSD V R L AG+ Sbjct: 3 VVIRLARAGTKKRPVYHVVVADSRFPRDGRFIERLGYFNPLLPKDNEARLKLDMDKVKAWLAKGAQPSDRVMRFLDAAGV 82
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_NITHX (30S ribosomal protein S16 OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=rpsP PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.295e-18 Identity = 45/80 (56.25%), Postives = 57/80 (71.25%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 246 VVIRLAR G K +P Y V+ ADSR PRDG+ +E LGY+NPL +D R+ ++ D+VK WL+ GAQPSD V R L AG+ Sbjct: 3 VVIRLARAGTKKRPVYHVVVADSRYPRDGRFIERLGYFNPLMPKDNADRLKIDLDKVKAWLAKGAQPSDRVARFLDAAGV 82
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_SINMW (30S ribosomal protein S16 OS=Sinorhizobium medicae (strain WSM419) GN=rpsP PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.209e-18 Identity = 43/82 (52.44%), Postives = 60/82 (73.17%), Query Frame = 1 Query: 13 IRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLLPPP 258 IRLAR G K +P+Y+++ AD+RSPRDG+ LE LG +NP+ +D KR+ LN +RV++W+ GAQP+D V R L +AGL P Sbjct: 5 IRLARGGSKKRPYYQIVVADARSPRDGRFLEKLGSWNPMLAKDDEKRIELNAERVQHWIDQGAQPTDRVLRFLDQAGLAKRP 86
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_RHOS4 (30S ribosomal protein S16 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=rpsP PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.209e-18 Identity = 44/78 (56.41%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 13 IRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 246 IRLAR G K +P Y ++A+DSR PRDG+ LE LG YNPL +D R+ +N +RV+YWL+ GAQP+D V R L AGL Sbjct: 5 IRLARGGSKKRPHYSIVASDSRMPRDGRFLEKLGTYNPLLAKDSEDRIKMNLERVQYWLAQGAQPTDRVARFLEAAGL 82
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_RHOS1 (30S ribosomal protein S16 OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=rpsP PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.209e-18 Identity = 44/78 (56.41%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 13 IRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 246 IRLAR G K +P Y ++A+DSR PRDG+ LE LG YNPL +D R+ +N +RV+YWL+ GAQP+D V R L AGL Sbjct: 5 IRLARGGSKKRPHYSIVASDSRMPRDGRFLEKLGTYNPLLAKDSEDRIKMNLERVQYWLAQGAQPTDRVARFLEAAGL 82
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_AGRVS (30S ribosomal protein S16 OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=rpsP PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.209e-18 Identity = 42/78 (53.85%), Postives = 59/78 (75.64%), Query Frame = 1 Query: 13 IRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 246 IRLAR G K +P+Y+++ AD+RSPRDG+ LE +G +NP+ G+D KR+ LN DR+K W++ GAQP+D V + L AGL Sbjct: 5 IRLARGGSKKRPYYQIVIADARSPRDGRFLEKVGSWNPMLGKDNEKRVELNADRIKEWIAKGAQPTDRVLKFLAEAGL 82
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_MAGSA (30S ribosomal protein S16 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=rpsP PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.885e-18 Identity = 42/82 (51.22%), Postives = 59/82 (71.95%), Query Frame = 1 Query: 13 IRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLLPPP 258 IRL+R G K +PFY+++ AD+R+PRDG+ +E +G YNP+ D G+R L+ DRVK+WLSVGAQP+D + R GL+ P Sbjct: 5 IRLSRGGAKKRPFYKIVVADARAPRDGRFIEKVGTYNPMLPNDNGQRWILDEDRVKHWLSVGAQPTDRLVRFFADKGLVAKP 86
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_ACICJ (30S ribosomal protein S16 OS=Acidiphilium cryptum (strain JF-5) GN=rpsP PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.885e-18 Identity = 45/82 (54.88%), Postives = 56/82 (68.29%), Query Frame = 1 Query: 13 IRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLLPPP 258 IRLAR G K +PFY ++ ADSRSPRDGK +E +G YNP+ D R+ L DRV +WLS GAQ +D V R + +AGL P P Sbjct: 5 IRLARAGAKKRPFYHIVVADSRSPRDGKFIERIGTYNPMLPADHEDRIRLVTDRVTHWLSQGAQATDRVARFIGKAGLAPMP 86
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_RHISN (30S ribosomal protein S16 OS=Rhizobium sp. (strain NGR234) GN=rpsP PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.768e-18 Identity = 42/82 (51.22%), Postives = 60/82 (73.17%), Query Frame = 1 Query: 13 IRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLLPPP 258 IRLAR G K +P+Y+++ AD+RSPRDG+ LE +G +NP+ +D KR+ LN +RV +W++ GAQP+D V R L +AGL P Sbjct: 5 IRLARGGSKKRPYYQIVVADARSPRDGRFLEKIGSWNPMLSKDDEKRIELNAERVSHWIAQGAQPTDRVLRFLDQAGLAKRP 86 The following BLAST results are available for this feature:
BLAST of EL492543 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EL492543 ID=EL492543; Name=EL492543; organism=Citrus sinensis; type=EST; length=259bpback to top |