EL492543
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_NOVAD (30S ribosomal protein S16 OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=rpsP PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.768e-18 Identity = 41/80 (51.25%), Postives = 61/80 (76.25%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 246 V +RL+R G K +P+Y+++ ++SR+PRDGK+LE +G YNPL +D R+ L DRV+YW+ VGAQP+D V R+L +AG+ Sbjct: 3 VSMRLSRGGSKKRPYYKIVVSNSRAPRDGKYLEQVGTYNPLLAKDDENRVRLIEDRVRYWIGVGAQPTDRVARMLDKAGI 82
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_ZYMMO (30S ribosomal protein S16 OS=Zymomonas mobilis GN=rpsP PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.921e-18 Identity = 44/81 (54.32%), Postives = 58/81 (71.60%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 249 V IRL+R G K +PFYR++ A+SRSPRDG +E +G YNP +D R+ ++ DR ++WLSVGAQP+D V R L AGLL Sbjct: 3 VSIRLSRGGAKRRPFYRIVIANSRSPRDGSFIEKIGSYNPQLPKDNENRVIVDLDRARHWLSVGAQPTDRVARFLDAAGLL 83
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_RHORT (30S ribosomal protein S16 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=rpsP PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.921e-18 Identity = 44/78 (56.41%), Postives = 57/78 (73.08%), Query Frame = 1 Query: 13 IRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 246 IRLAR G K +PFYR++ ADSRSPRDG+ +E LG ++P+ +D +R+ L +RVKYWL VGA PSD V R L +GL Sbjct: 5 IRLARGGAKKRPFYRIVVADSRSPRDGRFIEKLGTFDPMLPRDHERRVVLKDERVKYWLGVGALPSDRVARFLGLSGL 82
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_JANSC (30S ribosomal protein S16 OS=Jannaschia sp. (strain CCS1) GN=rpsP PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.921e-18 Identity = 42/80 (52.50%), Postives = 57/80 (71.25%), Query Frame = 1 Query: 13 IRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLLP 252 IRLAR G K +PFYR++A+DSR PRDG+ +E LG YNPL +D R+ ++ +RV++WL GAQP+D + R L AG P Sbjct: 5 IRLARGGSKKRPFYRIVASDSRMPRDGRFIEKLGTYNPLLPKDSEDRVKMDMERVQHWLDQGAQPTDRISRFLEAAGHTP 84
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_BRASO (30S ribosomal protein S16 OS=Bradyrhizobium sp. (strain ORS278) GN=rpsP PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.921e-18 Identity = 45/80 (56.25%), Postives = 57/80 (71.25%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 246 VVIRLAR G K +P Y V+ ADSR PRDG+ +E LGY+NPL +D R+ L+ ++VK WL+ GAQPSD V R L AG+ Sbjct: 3 VVIRLARAGTKKRPVYHVVVADSRFPRDGRFIERLGYFNPLMPKDNEARLKLDMEKVKGWLAKGAQPSDRVARFLDTAGV 82
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_BRASB (30S ribosomal protein S16 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=rpsP PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.921e-18 Identity = 45/80 (56.25%), Postives = 57/80 (71.25%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 246 VVIRLAR G K +P Y V+ ADSR PRDG+ +E LGY+NPL +D R+ L+ ++VK WL+ GAQPSD V R L AG+ Sbjct: 3 VVIRLARAGTKKRPVYHVVVADSRFPRDGRFIERLGYFNPLMPKDNEARLKLDMEKVKGWLAKGAQPSDRVARFLDAAGV 82
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_RHOPB (30S ribosomal protein S16 OS=Rhodopseudomonas palustris (strain BisB18) GN=rpsP PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.394e-18 Identity = 44/80 (55.00%), Postives = 57/80 (71.25%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 246 VVIRLAR G K +P Y V+ ADSR PRDG+ +E LG++NPL +D R+ L+ D+VK W++ GAQPSD V R L AG+ Sbjct: 3 VVIRLARAGTKKRPVYHVVVADSRFPRDGRFIERLGHFNPLLPKDSEARLKLDLDKVKAWVAKGAQPSDRVARFLDAAGV 82
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_RHOP5 (30S ribosomal protein S16 OS=Rhodopseudomonas palustris (strain BisA53) GN=rpsP PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.394e-18 Identity = 44/81 (54.32%), Postives = 58/81 (71.60%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 249 VVIRLAR G K +P Y V+ ADSR PRDG+ +E LG++NPL +D R+ L+ D+VK W++ GAQPSD V R L AG++ Sbjct: 3 VVIRLARAGTKKRPVYHVVVADSRFPRDGRFIERLGHFNPLLPKDNEARLKLDLDKVKAWVAKGAQPSDRVARFLDAAGVM 83
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_RHILO (30S ribosomal protein S16 OS=Rhizobium loti GN=rpsP PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.394e-18 Identity = 45/78 (57.69%), Postives = 59/78 (75.64%), Query Frame = 1 Query: 13 IRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 246 IRLAR G K +P+Y V+ AD+RSPRDG+ +E LG +NPL +D G+R+ ++ DRVK+WLS GAQP+D V R L AGL Sbjct: 5 IRLARAGSKKRPYYHVVVADARSPRDGRFIESLGSWNPLLPKD-GERVKVDADRVKHWLSHGAQPTDRVLRFLDEAGL 81
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_RHIEC (30S ribosomal protein S16 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=rpsP PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.394e-18 Identity = 43/78 (55.13%), Postives = 57/78 (73.08%), Query Frame = 1 Query: 13 IRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 246 IRLAR G K +P+Y V+ AD+RSPRDG+ LE LG +NP+ +D KR+ LN +R+K+WL GAQP+D V R L AG+ Sbjct: 5 IRLARGGSKKRPYYHVVLADARSPRDGRFLENLGSWNPMLAKDDEKRVQLNAERIKHWLDNGAQPTDRVLRFLNEAGV 82 The following BLAST results are available for this feature:
BLAST of EL492543 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EL492543 ID=EL492543; Name=EL492543; organism=Citrus sinensis; type=EST; length=259bpback to top |