EL492543
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_RHIE6 (30S ribosomal protein S16 OS=Rhizobium etli (strain CIAT 652) GN=rpsP PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.394e-18 Identity = 43/78 (55.13%), Postives = 57/78 (73.08%), Query Frame = 1 Query: 13 IRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 246 IRLAR G K +P+Y V+ AD+RSPRDG+ LE LG +NP+ +D KR+ LN +R+K+WL GAQP+D V R L AG+ Sbjct: 5 IRLARGGSKKRPYYHVVLADARSPRDGRFLENLGSWNPMLAKDDEKRVQLNAERIKHWLDNGAQPTDRVLRFLNEAGV 82
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_BRAJA (30S ribosomal protein S16 OS=Bradyrhizobium japonicum GN=rpsP PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.394e-18 Identity = 44/80 (55.00%), Postives = 57/80 (71.25%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 246 VVIRLAR G K +P Y V+ ADSR PRDG+ +E LGY+NPL +D R+ L+ ++VK W++ GAQPSD V R L AG+ Sbjct: 3 VVIRLARAGTKKRPVYHVVVADSRFPRDGRFIERLGYFNPLLPKDNEARLKLDMEKVKAWVAKGAQPSDRVSRFLDAAGV 82
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_AZOC5 (30S ribosomal protein S16 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=rpsP PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.394e-18 Identity = 41/79 (51.90%), Postives = 57/79 (72.15%), Query Frame = 1 Query: 13 IRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 249 IRLAR G K +P+YR++ AD+RSPRDG+ +E +G +NPL +D +R+ L+ ++ K WL GAQP+D V R L AGLL Sbjct: 5 IRLARGGAKKRPYYRIVVADARSPRDGRFIEKIGTFNPLLAKDAAERVTLDTEKAKAWLEKGAQPTDRVARFLDAAGLL 83
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_PARL1 (30S ribosomal protein S16 OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=rpsP PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.096e-17 Identity = 42/78 (53.85%), Postives = 58/78 (74.36%), Query Frame = 1 Query: 13 IRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 246 IRLAR G K +PFYRV+ AD+RSPRDG+ +E +G +NPL +D +R+ ++ +R K+WLSVGA P+D V R L AG+ Sbjct: 5 IRLARGGAKKRPFYRVVIADTRSPRDGRFIEKIGTFNPLLPKDNAERIKVDIERAKHWLSVGALPTDRVARFLDDAGV 82
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_AGRRK (30S ribosomal protein S16 OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=rpsP PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.096e-17 Identity = 42/78 (53.85%), Postives = 57/78 (73.08%), Query Frame = 1 Query: 13 IRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 246 IRLAR G K +P+Y V+ AD+RSPRDG+ LE +G +NP+ +D KR+ L+ DR+K+WL GAQP+D V R L AG+ Sbjct: 5 IRLARGGSKKRPYYHVVIADARSPRDGRFLEKVGSWNPMLAKDDAKRVELDADRIKHWLDNGAQPTDRVLRFLDEAGV 82
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_SILST (30S ribosomal protein S16 OS=Silicibacter sp. (strain TM1040) GN=rpsP PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.432e-17 Identity = 41/78 (52.56%), Postives = 58/78 (74.36%), Query Frame = 1 Query: 13 IRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 246 IRLAR G K +PFYR++AADSR PRDG+ +E LG YNPL +D +R+ ++ ++++ WL GAQP+D V R+L AG+ Sbjct: 5 IRLARGGSKKRPFYRIVAADSRMPRDGRFIEKLGTYNPLLPKDSEERVKMDIEKIQAWLDKGAQPTDRVARMLEAAGV 82
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_RICBR (30S ribosomal protein S16 OS=Rickettsia bellii (strain RML369-C) GN=rpsP PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.432e-17 Identity = 42/83 (50.60%), Postives = 58/83 (69.88%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLLPP 255 V IRLAR G K +PFYRV+ A++ +PRDG LE +G YNP+ +D +R+ L DRV+YWL GA+P+D V R + +AG+ P Sbjct: 3 VKIRLARGGAKKRPFYRVVVANATAPRDGDFLEKVGTYNPMLAKDSNERVVLKADRVEYWLKSGAKPTDRVARFIEQAGIALP 85
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_RICB8 (30S ribosomal protein S16 OS=Rickettsia bellii (strain OSU 85-389) GN=rpsP PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.432e-17 Identity = 42/83 (50.60%), Postives = 58/83 (69.88%), Query Frame = 1 Query: 7 VVIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLLPP 255 V IRLAR G K +PFYRV+ A++ +PRDG LE +G YNP+ +D +R+ L DRV+YWL GA+P+D V R + +AG+ P Sbjct: 3 VKIRLARGGAKKRPFYRVVVANATAPRDGDFLEKVGTYNPMLAKDSNERVVLKADRVEYWLKSGAKPTDRVARFIEQAGIALP 85
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_RHILW (30S ribosomal protein S16 OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=rpsP PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.432e-17 Identity = 42/78 (53.85%), Postives = 57/78 (73.08%), Query Frame = 1 Query: 13 IRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 246 IRLAR G K +P+Y V+ AD+RSPRDG+ LE LG +NP+ +D KR+ LN +R+K+W+ GAQP+D V R L AG+ Sbjct: 5 IRLARGGSKKRPYYHVVLADARSPRDGRFLENLGSWNPMLAKDDEKRVQLNAERIKHWIENGAQPTDRVLRFLDEAGV 82
BLAST of EL492543 vs. ExPASy Swiss-Prot
Match: RS16_RHIL3 (30S ribosomal protein S16 OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=rpsP PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.432e-17 Identity = 42/78 (53.85%), Postives = 57/78 (73.08%), Query Frame = 1 Query: 13 IRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDCGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 246 IRLAR G K +P+Y V+ AD+RSPRDG+ LE LG +NP+ +D KR+ LN +R+K+W+ GAQP+D V R L AG+ Sbjct: 5 IRLARGGSKKRPYYHVVLADARSPRDGRFLENLGSWNPMLAKDDEKRVQLNAERIKHWIEHGAQPTDRVLRFLDEAGV 82 The following BLAST results are available for this feature:
BLAST of EL492543 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EL492543 ID=EL492543; Name=EL492543; organism=Citrus sinensis; type=EST; length=259bpback to top |